Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001005505.1_202015-05-
08] 30 sequences; 12,880,761 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq12 181 1e-40
seq4 84.2 3e-11
>seq12
Length=1432871
Score = 181 bits (200), Expect = 1e-40
Identities = 1039/1647 (63%), Gaps = 51/1647 (3%)
Strand=Plus/Plus
Query 109500 GTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACA 109559
|||||| || |||||||| |||| || || | |||||| ||||| |||||| | |
Sbjct 861943 GTTCATAGATTGAGACTGGCAGATGTATGCGCCCCTATCAGCAGCCATAACGATGACAGA 862002
Query 109560 CTTTTGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCAC 109619
||| || ||| ||||| || ||| ||||||| |||||||| | |||||||| ||
Sbjct 862003 CTTCTGAGAAATCTCCCAAACTGTCCTGTACAACTTCTTGATCTTATCGGGAACGTTTGG 862062
Query 109620 GATGTTTTGAATAGAGCCACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAG 109679
| ||| |||||||| || | | | |||| | |||||| | | ||| |
Sbjct 862063 CAAGTTCTGAATAGAACCGTTGTCGTGAATGATGAAGTTCTTCATTGCATCGTTCCATAT 862122
Query 109680 ACCGACCTTTTTGAGATCG-TCAACAAG--ATGCTTGTTGACCACGACAAATTCACCAGC 109736
|| | | | ||||| |||||| | | | || || | || ||||||||||
Sbjct 862123 TCCCATGTCAATAAGATCTCTCAACATGTAAGGATTAACGATCTGGA---ATTCACCAGC 862179
Query 109737 AAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAG 109796
||| | || | |||||||||| ||| | ||||||||||| || || | || |
Sbjct 862180 AAGAACTCTTCTCTGATAGATGTTAGAGGTGAATGGTTCGAAACATTCGTTATAACCCAT 862239
Query 109797 GATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTT 109856
|| || | ||| ||||| || ||||| || |||| | |||| ||||| |||||
Sbjct 862240 AATCTGGGAAGTAGAAGCAGTCGGCATAGGTGCCACCAAAAGAGAGTTTCTAAGACCA-- 862297
Query 109857 CGTCTTTACCCGCTCACGCATTGCG----TCCCAATCATAACGACCACTAAATT--TAGT 109910
||||| | || | || || | ||||| || |||| | || |||
Sbjct 862298 -GTCTTGGCAATCTTA-GCCTTCAGAGTATCCCAGTC-------CCAC-AGATCCGTAGG 862347
Query 109911 CTCACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACT 109970
|| | ||||||||| ||| || | ||||| | ||| ||||| || | | |
Sbjct 862348 CTTTTTGTTCCACATATCATATTGTAGAATACCCTTTGAAGCTGGAGAGCCTTCATATGT 862407
Query 109971 CTCGTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACAT 110030
|| || | ||||| || | || | || | || |||| | ||| || |||||||
Sbjct 862408 CTGATAAGTACCCTCTTCCACAGCAAGCTGGTTGGATTCCTCCAATGCAGCGTGATACAA 862467
Query 110031 AGTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACA 110090
|||||||| || ||| || | || | ||| |||||| || || || | |
Sbjct 862468 GGTCTCAAATATCTGAATGTTAAGCTCCCGTGCATCTGGACAGTCAAAAGGTAGTCTA-- 862525
Query 110091 AAGAATAAACAC---ATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCAT 110147
|| || || | ||| || |||||||| | ||| ||| |||| || | | ||||
Sbjct 862526 -AGCATGAAGAAGGTATCAGCAAGACCCTGGATACCAAGAGCAATAGGTCTGTTTCTCAT 862584
Query 110148 GTTAGAGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATT 110207
||| ||| || || || || || | || | ||| || || || || | ||
Sbjct 862585 GTTGGAGTTACGGGCCTCAGGAACTGGATAGTAATTTCTGTCAATAACACGGTTTAAGTT 862644
Query 110208 CTTCGTCACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACG-----TTTTCGTC 110262
|| ||| || || || | || | || ||| | | |||| | || ||
Sbjct 862645 ACGGGTAACAACTTTAGTAATCTTGTGCAACTTCTCGAAGTTGAACCAGCAATGATCCTC 862704
Query 110263 TCCTTATTGA-CATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTC 110321
|| | | | || | || | | ||| || | || |||||| | ||| ||
Sbjct 862705 ATCTGACTCAACAAAGGCAGGCAAACAAATGTTGGCCAAGTTACACACACCAACCTCATC 862764
Query 110322 TTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTT 110381
| || ||| || | || || |||||||| ||| || ||| |||||||||
Sbjct 862765 TGGAGAGGAGTACTCGACAACCTCACAGCACAAGTTCGAAGATTTGATGGTACCCAAGTT 862824
Query 110382 CTTCTGATT-CGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTT 110440
||||||||| | ||| | || || |||||||| |||| |||| | || ||||||||||
Sbjct 862825 CTTCTGATTACTCTTTCTA-TTACAAGCATCCTTGTAGATCATGAAAGGTGTACCAGTTT 862883
Query 110441 CCGTCTGTGACTTGAGAATGGCCTTCCATA-CATCGGCGGCGGGGACAGTTGCGTTAGCG 110499
| ||||| | || | ||| | ||||| | || | | | || ||| | |
Sbjct 862884 CTGTCTGAGCCTCCAAAATCTGGTACCATAACTTCTGAGCCTTC-ACTGTTCTTCTTCCA 862942
Query 110500 AGACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAA 110559
| ||||| | |||||| |||||||| | ||| || || | ||||| ||||| ||
Sbjct 862943 CGTCCTTCTTTCTCGTAACGAGTGTACAATTTCTCGAACTCGTCACCGTAAACATCTGAG 863002
Query 110560 AGACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATT-TCCACCCTCCTCAACCCTCTT 110618
||||| |||| ||| |||| | | ||| || || ||| || || | |||
Sbjct 863003 AGACCTGGTGCCTCAGAAGGAGAGAACAATGTCCACTTGTCGTTGCTC-TCCACACGCTT 863061
Query 110619 CATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATC 110678
||| || | || |||||||| | || | || | ||||| |||| ||| || |
Sbjct 863062 CATAAATAAATCTGGAATCCAAAGAGCTGGAAACAAATCACGTGCACGAATCTCCTCTTT 863121
Query 110679 ACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATA 110738
||| || || | | || | |||||| | |||||| | ||||| || || | ||
Sbjct 863122 ACCATGATTCTTTCTGATATCGATAAAGTCGAAGATATCAGCATGCCAAGGCTCCAAGTA 863181
Query 110739 GACAGCGATGGATCC------CTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGC 110792
| ||| |||| || ||| || ||| || | ||||| | || ||
Sbjct 863182 AATAGCAATGGCACCTGGTCTCTTGTTACCACCT---TGATCCACATATCTAGCAGTACT 863238
Query 110793 ATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCT 110852
||||| || | | ||| ||||| || || | |||| |||||| ||||| |||
Sbjct 863239 GTTGAACACACGAACCATCGGAATTATACCGTTGGATGTACCATTAGTACCGGCAATATA 863298
Query 110853 GGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAAT 110912
|| | ||| |||||||| ||| || || | |||||||||||| || |||| |||
Sbjct 863299 CGAACCAGTGGAACGAATGTTGTGAATGTGAAGACCAATACCACCAGCAGTCTTAGAAAT 863358
Query 110913 TTGTGCACACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAAT 110972
||||||| | | | ||| | || ||||| ||||| || || | || | ||||
Sbjct 863359 CAAAGCACACTGTTTCAAAGTATCGTAGATACCTTCAATAGAGTCATCTTTCATTGCAAC 863418
Query 110973 TAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGC 111032
|| ||||| || ||||||||||| || || || || |||||||| | || |||| ||
Sbjct 863419 TAAGAAGCATGATGACATCTGAGGGCGTGGAGTACCAGCATTGAACAACGTTGGTGATGC 863478
Query 111033 ATGAATGAACAGACCTTGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTT 111092
||| |||| | | |||||| || |||| || | | || | ||| |
Sbjct 863479 ATGTGTGAAGTATCTCTTTGACATCAAGTCATATGATTCCAACACCTTAGGAATATCATC 863538
Query 111093 ACCGTGAATACCAATGGCAACTCGCAT 111119
||| |||||||| | ||| |||| |||
Sbjct 863539 ACCATGAATACCGACGGCCACTCTCAT 863565
>seq4
Length=381151
Score = 84.2 bits (92), Expect = 3e-11
Identities = 161/235 (69%), Gaps = 2/235 (1%)
Strand=Plus/Plus
Query 11673 CTTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTG 11732
|||||||| ||| ||||||||||| | || || || | ||| || | | |||
Sbjct 376703 CTTACCGATAGCATCAATCTCATCAACAAAAACAATGGATGGTGCATTTTCCCTTGCAGT 376762
Query 11733 TTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGC 11792
| || | ||||| || | || || |||||||| ||||| |||||||| | |
Sbjct 376763 CTTAAACAACTCACGAACTCTTGAAGCACCGACACCTACAAACATTTCAACGAATTCAGA 376822
Query 11793 GGCAGAACACTGAAT-GAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAG 11851
| | ||| ||||||| ||| ||||| |||| ||||| || | || ||||| | | ||
Sbjct 376823 GCCTGAA-ACTGAATAGAATGGAACTTTAGCTTCACCCGCAGTTGCACGAGCCAACAAAG 376881
Query 11852 TCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC 11906
| ||||| |||||||||| ||| | | || ||||| || ||||| || ||
Sbjct 376882 TTTTACCTGTACCAGGTGGTCCACACAATATCGCACCACGTGGTATCTTAGCTCC 376936
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588975779134000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |