Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001005505.1_202015-05-
08] 30 sequences; 12,880,761 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq23 140 6e-28
>seq23
Length=1356690
Score = 140 bits (154), Expect = 6e-28
Identities = 387/577 (67%), Gaps = 31/577 (5%)
Strand=Plus/Plus
Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533
||||||||| | |||||||||||||| | ||| |||||| ||||| ||||| |||
Sbjct 990673 GATATATGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCCGAGGAGATCGAT 990732
Query 25534 CTGGCCAAGGACATGGACGGCTGGTACGC-----TCTAT-CCAAAGACGAGCAGCATTTT 25587
|| | ||||| || || |||| | | | || |||| || ||| | | |
Sbjct 990733 CTCTCAAAGGATTTGACCGACTGGAATGACAAGATGAATGCCAATGA-GAGATACTTCAT 990791
Query 25588 CTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGC 25647
||| || || ||||| |||||||| || || |||||||| || | |||||| ||
Sbjct 990792 CTCTCGT--GTCTTGGCCTTCTTTGCCGCTTCAGATGGTATTGTCGATGAGAATTTGGCA 990849
Query 25648 GAGAGATTCACCAGGGAAGTGCAGT-ACGTGGAGGCCAAGTGT-TTCTACGGTTTCCAGA 25705
||| || | | | | ||||||| || || |||| ||| | ||||| ||||||||||
Sbjct 990850 CAGAACTTTATGAAGCAGGTGCAGTTACCTG-AGGC-AAGAGCCTTCTATGGTTTCCAGA 990907
Query 25706 TGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGAT---GACGTACATTA 25762
| | || || | ||||||||| ||| || ||| |||| ||| || || |
Sbjct 990908 TTATGGTTGAGAACATCCACTCTGAGACTTATTCC---CTTTTGATCGAGACCTATATCA 990964
Query 25763 CAGACGTCGCCGAGAGAGATCGGCTGTTTGGT----GCCATCGAGCACATACCCAGC-AT 25817
| ||| || |||| || || ||| | |||||| | ||| ||| | ||
Sbjct 990965 CTGACAA----GAAAGAGTCCGACTACTTGTTCAATGCCATCCAT-ACAATTCCACCTAT 991019
Query 25818 CAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGA 25877
||| |||||| ||||| ||| ||||| |||| | ||| || || ||
Sbjct 991020 TAAGGAGAAGGCTTTATGGGCTTTGAGATGGATAAACAATGATGATGCTTTGTATGCTGA 991079
Query 25878 GCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCAT 25937
| | |||| || |||||||| | || || | |||||| || |||||||| ||||
Sbjct 991080 GAGATTGGTTGCTTTTGCTGCCATTGAAGGTGTGTTTTTCTCTGGATCGTTTGCCTCCAT 991139
Query 25938 CTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTAC-TTTTCCAACGAGCTCATCA 25996
||||||| | ||| ||| || ||||| || || ||| || || |||||||| |||
Sbjct 991140 CTTCTGGTTGAAGAAGAGAGGTTTGATGCCAGGCCT-TACGTTCTCTAACGAGCTTATCT 991198
Query 25997 GCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCT 26033
|||| || |||||||| || | |||||||| |||||
Sbjct 991199 GCAGAGATGAGGGTCTACATACCGATTTTGCATGCCT 991235
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928844451683200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |