Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001005505.1_202015-05- 08] 30 sequences; 12,880,761 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq23 140 6e-28 >seq23 Length=1356690 Score = 140 bits (154), Expect = 6e-28 Identities = 387/577 (67%), Gaps = 31/577 (5%) Strand=Plus/Plus Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533 ||||||||| | |||||||||||||| | ||| |||||| ||||| ||||| ||| Sbjct 990673 GATATATGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCCGAGGAGATCGAT 990732 Query 25534 CTGGCCAAGGACATGGACGGCTGGTACGC-----TCTAT-CCAAAGACGAGCAGCATTTT 25587 || | ||||| || || |||| | | | || |||| || ||| | | | Sbjct 990733 CTCTCAAAGGATTTGACCGACTGGAATGACAAGATGAATGCCAATGA-GAGATACTTCAT 990791 Query 25588 CTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGC 25647 ||| || || ||||| |||||||| || || |||||||| || | |||||| || Sbjct 990792 CTCTCGT--GTCTTGGCCTTCTTTGCCGCTTCAGATGGTATTGTCGATGAGAATTTGGCA 990849 Query 25648 GAGAGATTCACCAGGGAAGTGCAGT-ACGTGGAGGCCAAGTGT-TTCTACGGTTTCCAGA 25705 ||| || | | | | ||||||| || || |||| ||| | ||||| |||||||||| Sbjct 990850 CAGAACTTTATGAAGCAGGTGCAGTTACCTG-AGGC-AAGAGCCTTCTATGGTTTCCAGA 990907 Query 25706 TGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGAT---GACGTACATTA 25762 | | || || | ||||||||| ||| || ||| |||| ||| || || | Sbjct 990908 TTATGGTTGAGAACATCCACTCTGAGACTTATTCC---CTTTTGATCGAGACCTATATCA 990964 Query 25763 CAGACGTCGCCGAGAGAGATCGGCTGTTTGGT----GCCATCGAGCACATACCCAGC-AT 25817 | ||| || |||| || || ||| | |||||| | ||| ||| | || Sbjct 990965 CTGACAA----GAAAGAGTCCGACTACTTGTTCAATGCCATCCAT-ACAATTCCACCTAT 991019 Query 25818 CAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGA 25877 ||| |||||| ||||| ||| ||||| |||| | ||| || || || Sbjct 991020 TAAGGAGAAGGCTTTATGGGCTTTGAGATGGATAAACAATGATGATGCTTTGTATGCTGA 991079 Query 25878 GCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCAT 25937 | | |||| || |||||||| | || || | |||||| || |||||||| |||| Sbjct 991080 GAGATTGGTTGCTTTTGCTGCCATTGAAGGTGTGTTTTTCTCTGGATCGTTTGCCTCCAT 991139 Query 25938 CTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTAC-TTTTCCAACGAGCTCATCA 25996 ||||||| | ||| ||| || ||||| || || ||| || || |||||||| ||| Sbjct 991140 CTTCTGGTTGAAGAAGAGAGGTTTGATGCCAGGCCT-TACGTTCTCTAACGAGCTTATCT 991198 Query 25997 GCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCT 26033 |||| || |||||||| || | |||||||| ||||| Sbjct 991199 GCAGAGATGAGGGTCTACATACCGATTTTGCATGCCT 991235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844451683200