Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001005505.1_202015-05-
08] 30 sequences; 12,880,761 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq12 114 7e-21
>seq12
Length=1432871
Score = 114 bits (126), Expect = 7e-21
Identities = 288/435 (66%), Gaps = 2/435 (0%)
Strand=Plus/Plus
Query 25930 CTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTC 25989
|| ||||||||||||||||||||| | || ||| ||||| | || | || || ||
Sbjct 863059 CTTCATAAATAAATCTGGAATCCAAAGAGCTGGAAACAAATCACGTGCACGAATCTCCTC 863118
Query 25990 TTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAA 26049
||| || ||||||||| | | ||| | || || || ||||| | ||||| || || ||
Sbjct 863119 TTTACCATGATTCTTTCTGATATCGATAAAGTCGAAGATATCAGCATGCCAAGGCTCCAA 863178
Query 26050 ATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTC 26109
|| ||||||| |||| ||| || ||||||||||| || ||||| |||||
Sbjct 863179 GTAAATAGCAATGGCACCTGGTCTCTTGTTACCACCTTGATCCACATATCTAGCAGTACT 863238
Query 26110 ATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAAT-CCGTTTGTGCTATGAATCT 26168
||||| || | ||| |||| | || | |||| | | || || || | ||| |
Sbjct 863239 GTTGAACACACGAACCATCGGAA-TTATACCGTTGGATGTACCATTAGTACCGGCAATAT 863297
Query 26169 TGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAA 26228
|| || || || | ||| | |||| |||| ||| || |||||||| || ||||
Sbjct 863298 ACGAACCAGTGGAACGAATGTTGTGAATGTGAAGACCAATACCACCAGCAGTCTTAGAAA 863357
Query 26229 TAGCTGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTA 26288
| ||||| | | | |||||| | || |||| || ||| |||||||| | |
Sbjct 863358 TCAAAGCACACTGTTTCAAAGTATCGTAGATACCTTCAATAGAGTCATCTTTCATTGCAA 863417
Query 26289 ATAAAAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAG 26348
||| || || || || | || | | | || || | ||| || || || |||| |
Sbjct 863418 CTAAGAAGCATGATGACATCTGAGGGCGTGGAGTACCAGCATTGAACAACGTTGGTGATG 863477
Query 26349 CATGAGTATAATATC 26363
|||| || | ||||
Sbjct 863478 CATGTGTGAAGTATC 863492
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253039907482250
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |