Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001005505.1_202015-05- 08] 30 sequences; 12,880,761 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq12 114 7e-21 >seq12 Length=1432871 Score = 114 bits (126), Expect = 7e-21 Identities = 288/435 (66%), Gaps = 2/435 (0%) Strand=Plus/Plus Query 25930 CTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTC 25989 || ||||||||||||||||||||| | || ||| ||||| | || | || || || Sbjct 863059 CTTCATAAATAAATCTGGAATCCAAAGAGCTGGAAACAAATCACGTGCACGAATCTCCTC 863118 Query 25990 TTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAA 26049 ||| || ||||||||| | | ||| | || || || ||||| | ||||| || || || Sbjct 863119 TTTACCATGATTCTTTCTGATATCGATAAAGTCGAAGATATCAGCATGCCAAGGCTCCAA 863178 Query 26050 ATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTC 26109 || ||||||| |||| ||| || ||||||||||| || ||||| ||||| Sbjct 863179 GTAAATAGCAATGGCACCTGGTCTCTTGTTACCACCTTGATCCACATATCTAGCAGTACT 863238 Query 26110 ATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAAT-CCGTTTGTGCTATGAATCT 26168 ||||| || | ||| |||| | || | |||| | | || || || | ||| | Sbjct 863239 GTTGAACACACGAACCATCGGAA-TTATACCGTTGGATGTACCATTAGTACCGGCAATAT 863297 Query 26169 TGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAA 26228 || || || || | ||| | |||| |||| ||| || |||||||| || |||| Sbjct 863298 ACGAACCAGTGGAACGAATGTTGTGAATGTGAAGACCAATACCACCAGCAGTCTTAGAAA 863357 Query 26229 TAGCTGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTA 26288 | ||||| | | | |||||| | || |||| || ||| |||||||| | | Sbjct 863358 TCAAAGCACACTGTTTCAAAGTATCGTAGATACCTTCAATAGAGTCATCTTTCATTGCAA 863417 Query 26289 ATAAAAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAG 26348 ||| || || || || | || | | | || || | ||| || || || |||| | Sbjct 863418 CTAAGAAGCATGATGACATCTGAGGGCGTGGAGTACCAGCATTGAACAACGTTGGTGATG 863477 Query 26349 CATGAGTATAATATC 26363 |||| || | |||| Sbjct 863478 CATGTGTGAAGTATC 863492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039907482250