Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001005505.1_202015-05- 08] 30 sequences; 12,880,761 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq4 120 4e-22 >seq4 Length=381151 Score = 120 bits (132), Expect = 4e-22 Identities = 312/466 (67%), Gaps = 16/466 (3%) Strand=Plus/Plus Query 138189 ATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGTAAATTT 138248 || ||||| || |||||||| ||||||||||| ||||| ||||||||||| || | ||| Sbjct 292413 ATTGGACCCACACCAGGACCGCCACCTCCATGAGGAATGCAGAATGTCTTGTGAAGATTC 292472 Query 138249 AGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCATTTAGA 138308 | || || | ||||||||| | ||| ||||| | || || ||||| ||||| | Sbjct 292473 AAGTGGCAAAGATCTGCACCTAAATCAGATGGTGAGGTAAGTCCAACCTGGGCATTCATG 292532 Query 138309 TTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATCTGT-CT 138367 || |||||||| | ||| || |||| |||| | || || || | || | || || Sbjct 292533 TTAGCACCATCCATATAGACAAGACCGCCATATTTGTGCACAAT-GTCTATTGCAGTCCT 292591 Query 138368 GATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATG--AGAGT 138425 ||| | ||||| | || ||||| ||| ||||| ||||| | | | ||| | Sbjct 292592 AATGCCAGGCTCAAAAAGCCCGAAAGTCGTTGGGTATGTGATCATGAAAGCGGCAAGATT 292651 Query 138426 -TCAAATGTATTCATGATTGCTTTCTTCTCTAGATCTTTGATGTCTATGTTGCCATCATC 138484 ||| | | | | | |||| |||||| | ||||| |||| | | || || || Sbjct 292652 GTCA---GCGTGCTTCTTGGCTTGCTTCTCCATATCTTCCATGTTCAAACTTCCGTCCTC 292708 Query 138485 ATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGATTAGTTCC 138544 | ||| ||||| |||||||| | || ||||| | ||| ||| || || || || Sbjct 292709 AAGACATTTGACTGGCACAACTTTGAAACCAGCCATTGCAGCAGAAGCTGGGTTTGTACC 292768 Query 138545 ATGTG--CTGACTCTGGTATCAGACATACATTTCTTTTATCATC--TCCTGATCCTTGAT 138600 |||| |||| | || |||| | || |||||||| |||| ||||| |||| Sbjct 292769 GTGTGCACTGA--CAGGAATCAAAACAACCTTTCTTTTGGCATCATTCCTG--GAGTGAT 292824 Query 138601 GATATGCTTGGATTGCTAACAGTCCTGCATACTCACCCTGTGATCC 138646 | ||||| | || | | || || | ||||| ||||||| ||| Sbjct 292825 GGTATGCACGAATGACAGAAAGACCCGTGTACTCGCCCTGTGCTCC 292870 Score = 98.7 bits (108), Expect = 1e-15 Identities = 189/279 (68%), Gaps = 0/279 (0%) Strand=Plus/Plus Query 139263 CCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCT 139322 || |||| ||||||||| | |||||| | | | ||| || | ||||| ||||| Sbjct 293511 CCTTCTGGACCATGATAGACAGCATAGGAAGATGCAACATTGGCCAAAAGTGCCTGTGCA 293570 Query 139323 GTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCT 139382 || ||||| ||| || ||||| ||||| || || |||||||| ||||| || || || Sbjct 293571 GTACAGATATTAGAAGTGGCTTTCTCTCTCCTGATGTGCTGCTCCCTAGTCTGAAGAGCA 293630 Query 139383 AATCTGTATGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGTATC 139442 | || | || || | ||| ||||| ||| || |||| ||| || || ||| Sbjct 293631 AGCCTCAAAGCTGGGTGGCCAAGTCTGTCTTTTGAAACGCCCACAAGTCTTCCTGGCATC 293690 Query 139443 TTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCATA 139502 |||||||| | |||| | ||| | ||||| || | || || || ||||||| Sbjct 293691 TTTCTCTTTAAAGAGTCTTTAACTGCCATAAATGCTGCGTACGGTCCACCAAATCCCATT 293750 Query 139503 GGAATACCAAACCTTTGCATACTACCTACAGCAATATCA 139541 |||| ||| || ||||| ||| || ||||||||| Sbjct 293751 GGAACACCGAATCTTTGTGCCGAACCCACTGCAATATCA 293789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578998182875600