Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001005505.1_202015-05-
08] 30 sequences; 12,880,761 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq4 120 4e-22
>seq4
Length=381151
Score = 120 bits (132), Expect = 4e-22
Identities = 312/466 (67%), Gaps = 16/466 (3%)
Strand=Plus/Plus
Query 138189 ATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGTAAATTT 138248
|| ||||| || |||||||| ||||||||||| ||||| ||||||||||| || | |||
Sbjct 292413 ATTGGACCCACACCAGGACCGCCACCTCCATGAGGAATGCAGAATGTCTTGTGAAGATTC 292472
Query 138249 AGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCATTTAGA 138308
| || || | ||||||||| | ||| ||||| | || || ||||| ||||| |
Sbjct 292473 AAGTGGCAAAGATCTGCACCTAAATCAGATGGTGAGGTAAGTCCAACCTGGGCATTCATG 292532
Query 138309 TTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATCTGT-CT 138367
|| |||||||| | ||| || |||| |||| | || || || | || | || ||
Sbjct 292533 TTAGCACCATCCATATAGACAAGACCGCCATATTTGTGCACAAT-GTCTATTGCAGTCCT 292591
Query 138368 GATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATG--AGAGT 138425
||| | ||||| | || ||||| ||| ||||| ||||| | | | ||| |
Sbjct 292592 AATGCCAGGCTCAAAAAGCCCGAAAGTCGTTGGGTATGTGATCATGAAAGCGGCAAGATT 292651
Query 138426 -TCAAATGTATTCATGATTGCTTTCTTCTCTAGATCTTTGATGTCTATGTTGCCATCATC 138484
||| | | | | | |||| |||||| | ||||| |||| | | || || ||
Sbjct 292652 GTCA---GCGTGCTTCTTGGCTTGCTTCTCCATATCTTCCATGTTCAAACTTCCGTCCTC 292708
Query 138485 ATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGATTAGTTCC 138544
| ||| ||||| |||||||| | || ||||| | ||| ||| || || || ||
Sbjct 292709 AAGACATTTGACTGGCACAACTTTGAAACCAGCCATTGCAGCAGAAGCTGGGTTTGTACC 292768
Query 138545 ATGTG--CTGACTCTGGTATCAGACATACATTTCTTTTATCATC--TCCTGATCCTTGAT 138600
|||| |||| | || |||| | || |||||||| |||| ||||| ||||
Sbjct 292769 GTGTGCACTGA--CAGGAATCAAAACAACCTTTCTTTTGGCATCATTCCTG--GAGTGAT 292824
Query 138601 GATATGCTTGGATTGCTAACAGTCCTGCATACTCACCCTGTGATCC 138646
| ||||| | || | | || || | ||||| ||||||| |||
Sbjct 292825 GGTATGCACGAATGACAGAAAGACCCGTGTACTCGCCCTGTGCTCC 292870
Score = 98.7 bits (108), Expect = 1e-15
Identities = 189/279 (68%), Gaps = 0/279 (0%)
Strand=Plus/Plus
Query 139263 CCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCT 139322
|| |||| ||||||||| | |||||| | | | ||| || | ||||| |||||
Sbjct 293511 CCTTCTGGACCATGATAGACAGCATAGGAAGATGCAACATTGGCCAAAAGTGCCTGTGCA 293570
Query 139323 GTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCT 139382
|| ||||| ||| || ||||| ||||| || || |||||||| ||||| || || ||
Sbjct 293571 GTACAGATATTAGAAGTGGCTTTCTCTCTCCTGATGTGCTGCTCCCTAGTCTGAAGAGCA 293630
Query 139383 AATCTGTATGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGTATC 139442
| || | || || | ||| ||||| ||| || |||| ||| || || |||
Sbjct 293631 AGCCTCAAAGCTGGGTGGCCAAGTCTGTCTTTTGAAACGCCCACAAGTCTTCCTGGCATC 293690
Query 139443 TTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCATA 139502
|||||||| | |||| | ||| | ||||| || | || || || |||||||
Sbjct 293691 TTTCTCTTTAAAGAGTCTTTAACTGCCATAAATGCTGCGTACGGTCCACCAAATCCCATT 293750
Query 139503 GGAATACCAAACCTTTGCATACTACCTACAGCAATATCA 139541
|||| ||| || ||||| ||| || |||||||||
Sbjct 293751 GGAACACCGAATCTTTGTGCCGAACCCACTGCAATATCA 293789
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578998182875600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |