Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001005505.1_202015-05- 08] 30 sequences; 12,880,761 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq12 239 5e-58 seq26 111 2e-19 seq28 87.8 2e-12 >seq12 Length=1432871 Score = 239 bits (264), Expect = 5e-58 Identities = 928/1434 (65%), Gaps = 41/1434 (3%) Strand=Plus/Minus Query 75206 GAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGAT 75265 |||| ||||| || | | ||| | || || |||| || || || || || ||| | Sbjct 863586 GAAAGACCACAACACCTTCTTATGAGAGTGGCCGTCGGTATTCATGGTGATGATATTCCT 863527 Query 75266 TCTGTCTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAAC 75324 || ||||| |||| ||| |||||| | || || |||| || ||| ||||||| Sbjct 863526 AAGGTGTTGGAATCATATGACTTGATGTCAAAGAGATAC-TTCACACATGCATCACCAAC 863468 Query 75325 CCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAA 75384 | |||||||||||||| ||| | || |||||||| |||||| | | || | || Sbjct 863467 GTTGTTCAATGCTGGTACTCCACGCCCTCAGATGTCATCATGCTTCTTAGTTGCAATGAA 863408 Query 75385 GGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTG 75444 || ||||| || | |||||||| | ||| | | ||||||| || || ||| Sbjct 863407 AGATGACTCTATTGAAGGTATCTACGATACTTTGAAACAGTGTGCTTTGATTTCTAAGAC 863348 Query 75445 GGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGG 75504 ||||| |||||||| | ||||| || | | | ||| | || |||| || Sbjct 863347 TGCTGGTGGTATTGGTCTTCACATTCACAACATTCGTTCCACTGGTTCGTATATTGCCGG 863288 Query 75505 GACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 75564 || |||||| ||| | ||||| ||||| ||| |||| || || ||| || || | Sbjct 863287 TACTAATGGTACATCCAACGGTATAATTCCGATGGTTCGTGTGTTCAACAGTACTGCTAG 863228 Query 75565 CTATGTAAATCAAGCGGGGCGTCGCAAG------GGGTCCATCGCGGTCTACTTGGAACC 75618 ||||| ||||| || || |||| || |||| || | |||||||| || Sbjct 863227 ATATGTGGATCAA---GGTGGTAACAAGAGACCAGGTGCCATTGCTATTTACTTGGAGCC 863171 Query 75619 ATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGC 75678 |||||||| |||||| | || || | || | || || || ||| | || ||| Sbjct 863170 TTGGCATGCTGATATCTTCGACTTTATCGATATCAGAAAGAATCATGGTAAAGAGGAGAT 863111 Query 75679 TCGGTGTA-GAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTG 75737 || ||| | | ||| | ||| || | || ||||||||||| | || |||||||| || | Sbjct 863110 TC-GTGCACGTGATTTGTTTCCAGCTCTTTGGATTCCAGATTTATTTATGAAGCGTGTGG 863052 Query 75738 AGGAGGGTGGTCAA-TGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCG 75796 | ||| | ||| ||| | | |||| ||| |||||||||||||||| || | Sbjct 863051 A-GAGCAACGACAAGTGGACATTGTTCTCTCCTTCTGAGGCACCAGGTCTCTCAGATGTT 862993 Query 75797 GTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCG 75856 ||||| ||||| || | ||||| || || | || || | | | Sbjct 862992 TACGGTGACGAGTTCGAGAAATTGTACACTCGTTACGAGAAAGAAGGACGTGGAAGAAGA 862933 Query 75857 ACTGTACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAAC 75915 || || || | | || ||| ||| | ||| | | | ||||| || ||||| || Sbjct 862932 ACAGT-GAAGGCTCAGAAGTTATGGTACCAGATTTTGGAGGCTCAGACAGAAACTGGTAC 862874 Query 75916 ACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAAC 75975 ||| | ||| | ||||||||||||||||| | |||||||| || ||||| ||||| || Sbjct 862873 ACCTTTCATGATCTACAAGGATGCTTGTAATAGAAAGAGTAATCAGAAGAACTTGGGTAC 862814 Query 75976 AATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGC 76035 ||||| || || | ||| || || | |||||| | | |||||| | Sbjct 862813 CATCAAATCTTCGAACTTGTGCTGTGAGGTTGTCGAGTACTCCTCTCCAGATGAGGTTGG 862754 Query 76036 TGTTTGCAATTTGG-CATCAATCG---CCCTTCCAAAG-TATGTCA-ATGAAGAGACTCG 76089 ||| || || |||| || || | | ||| || | | |||| |||| || | | Sbjct 862753 TGTGTGTAACTTGGCCAACATTTGTTTGCCTGCCTTTGTTGAGTCAGATGAGGATCATTG 862694 Query 76090 CACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCG 76149 | || | | || || | || | || || || |||||||| || ||||||| Sbjct 862693 CTGGTTCAACTTCGAGAAGTTGCACAAGATTACTAAAGTTGTTACCCGTAACTTAAACCG 862634 Query 76150 AGTCATTGACAGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCGACA 76206 || ||||||||||||| ||||| || |||| || || || || || ||| || | Sbjct 862633 TGTTATTGACAGAAATTACTATCCAGTTCCTGAG---GCCCGTAACTCCAACATGAGAAA 862577 Query 76207 CAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTG-TGCCGCTACG 76265 ||||||||||| | | ||| | || ||||| || ||| || | || | |||| Sbjct 862576 CAGACCTATTGCTCTTGGTATCCAGGGTCTTGCTGATACCTTCTTCATGCTTAGACTAC- 862518 Query 76266 CATTTGA---TTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATC 76322 | ||||| | ||||| || |||| | || || || ||||| ||| |||||| Sbjct 862517 CTTTTGACTGTCCAGAT---GCACGGGAGCTTAACATTCAGATATTTGAGACCTTGTATC 862461 Query 76323 ACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTG 76382 |||| | |||||| | | |||| | | ||| | ||| |||||| || Sbjct 862460 ACGCTGCATTGGAGGAATCCAACCAGCTTGCTGTGGAAGAGGGTACTTATCAGACATATG 862401 Query 76383 AGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAA-- 76440 | || ||||| || || | || | || || | |||||||| |||| || || | Sbjct 862400 AAGGCTCTCCAGCTTCAAAGGGTATTCTACAATATGATATGT-GGAACAAAAAGCCTACG 862342 Query 76441 GCTCAACTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAG 76500 | || | ||||||||| ||| |||| || ||| |||||| | ||| Sbjct 862341 GATC-TGTGGGACTGGGATACTCTGAAGGCTAAGATTGCCAAGACTGGTCTTAGAAACTC 862283 Query 76501 TCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATG 76560 ||||||| ||||||| ||||| || || || || | || || ||||| |||| ||||| Sbjct 862282 TCTTTTGGTGGCACCTATGCCGACTGCTTCTACTTCCCAGATTATGGGTTATAACGAATG 862223 Query 76561 CTTTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTT 76614 || ||||||| ||| | |||||||| | ||||||| || || ||||| || Sbjct 862222 TTTCGAACCATTCACCTCTAACATCTATCAGAGAAGAGTTCTTGCTGGTGAATT 862169 >seq26 Length=1546578 Score = 111 bits (122), Expect = 2e-19 Identities = 858/1357 (63%), Gaps = 68/1357 (5%) Strand=Plus/Plus Query 75614 GAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTT-ACGACTCAACCAAGGTGACGA 75672 || || |||||||| ||||| |||| ||||| || | | || ||||| || | || Sbjct 306832 GAGCCCTGGCATGCGGATATTCTGGAATTCCTCGACCTCAAGAAG-AACCACGGCAAGGA 306890 Query 75673 AGAGGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCG 75732 || ||| || |||||||||| | |||||||||| ||||| ||||||| ||| Sbjct 306891 GGAAATGCGGGCAAGGGATCTCTTTTATGCGTTGTGGATTCCGGACCTGTTCATGAGGCG 306950 Query 75733 GGTTGAGGAGGGTGGTCAATGG--TCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCC 75790 || || | | | ||| ||||||||||| | ||| |||||||| || || Sbjct 306951 TGTGAAGAATGACGAGATGTGGAGTCTCTTTTCTGAGGATACA--GCACCAGGACTATCA 307008 Query 75791 GACGCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCC 75850 ||| |||| ||||||||| |||| |||||| |||| ||| | || || | | Sbjct 307009 GACAAATGGGGTCCCGAGTTTGAATCCCTGTACACACAGTACGAAAAAGAAGGCCG-GTA 307067 Query 75851 AATGCGACTGTACCAGCCGC-CGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGAC 75909 | || | || || | | | | || ||| || ||||| | || ||||| ||||| Sbjct 307068 TCTACGGCAGTTGAAGGCCCGCAAGGTGTGGGAGAGGATTCTTTATTCTCAGACCGAGAC 307127 Query 75910 TGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTT 75969 ||||| || | | ||||| |||||| | || || |||| || || ||||| | Sbjct 307128 AGGAACGCCTTTCCTCCTTTATAAGGATTCGTGCAATGCGAAGTCGAATCAGAAGAACCT 307187 Query 75970 GGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGA 76029 ||||| |||||| || ||||| ||| ||| || | |||||| || ||||| || Sbjct 307188 TGGAACCATCAAGTCGTCCAATCTCTGCTGCGAAGTTGTCGAGTACTCATCCAAGGACGA 307247 Query 76030 GACGGCTGTTTGCAAT-TTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGA--- 76085 || || || ||||| ||||| || | | | || | || ||| | || || | Sbjct 307248 GATCGCCGTGTGCAACCTTGGC-TCTGTTGGGTTGCCGATGTTTGTGGAGGAGGAAAACG 307306 Query 76086 ------CTCGCACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAA 76139 || | | ||| | || || || || | | || || | || | Sbjct 307307 ACGGTACTAGGAGTTTCAACCTGGAGAAGCTCCACCAGGTGGTGAAAGTTCTCGTGAAGA 307366 Query 76140 ATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGTTGAGACTGCGC-GAAAGTCTAAT 76198 | || ||||| || || || | || || ||||| | | || ||| ||| ||| Sbjct 307367 ACCTCAACCGGGTTATCGATGTGGGTGCATACCCGCTTGAG-CAGTGCAGAACGTCAAAT 307425 Query 76199 ATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGC 76258 | | | || | || |||| | ||||||||||| | || |||| ||| || | || Sbjct 307426 ACGAGGCATCGTCCGATTGCAGTCGGTGTTCAAGGATTAGCAGATGC-TTTCTTCAG-GC 307483 Query 76259 CGCTACG--CATTTG--ATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAAC 76314 | | |||||| | || | | || | || |||| | |||||| | || Sbjct 307484 TGAGGTGTCCATTTGGAAGTCCGT--ACTCCCGGAAGTTGAACAAGCAAATCTTTCAGAC 307541 Query 76315 CATGTATCACGCATCCCTGGAGGCGAGT-TGTGAA-TTGGCTGAAGCCCAAGGTTCCTAT 76372 || || || ||| |||| ||| ||| |||| | |||||| | | || | ||| Sbjct 307542 GATCTACCATGCAGCCCTTGAGC--AGTCTGTGGAGTTGGCTCAGAAAGACGGCCCATAT 307599 Query 76373 GAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGT 76432 ||| ||||| || || || | || ||||| || ||||||| ||||||||||| | | Sbjct 307600 TCGACGTTTGAAGGCTCGCCAGGCTCGCAAGGTGTTCTTCAGTATGATATGTGGGGCG-T 307658 Query 76433 GAAACC--AAGCTCAACTAC----------GACTGGGATGTTCTCAAGGAACGCATCAAG 76480 ||| || ||| ||| | || ||||| | ||| || | ||| || Sbjct 307659 GAAGCCGGAAGA--AACGAGAAGTCTGTGGGATTGGGAAGGTCTTAAAGCTAAGATCGAG 307716 Query 76481 -GAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACA 76539 | | |||| | | ||| || | ||||| ||||| || || || || | || Sbjct 307717 CGGGTCGGGT-TAAGGAACTCGCTCCTAGTGGCATTGATGCCGACGGCTTCTACATCGCA 307775 Query 76540 AATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCTACCTGAGAAGAAC 76599 |||||||| | |||||||| |||||| |||| | || |||||| || ||| Sbjct 307776 GATCTTGGGATTCACCGAATGCTTCGAACCAATCACATCCAATATCTACACCAGGAGAGT 307835 Query 76600 CCTCGCAGGTGAGTTTGTCATTGTCAACAAGCACCTCGTCAATGACCTCAAGAAGATTGG 76659 ||| | |||||| | || ||| | ||||| || | || || | ||| | || Sbjct 307836 CCTTTCCGGTGAGCACCAGGTGGTAAACTCGTACCTCATCGACGATCTTGACAAGTTGGG 307895 Query 76660 TCTCTGG---TCCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAA 76716 |||||| ||| ||| |||||||| | || | || ||| ||||| || | Sbjct 307896 GCTCTGGAACTCC--GGA-ATGAAGGACCAGATTATTGCCGCCAATGGATCCATCCAGGA 307952 Query 76717 TATCTCAGATATCCCAGATGATATCAAGAATCTCTACCGCACAGTGTGGGAAAT----CA 76772 ||| ||| ||||| || | |||||| | || ||| ||||| ||||| || || Sbjct 307953 TATTGCAGGCATCCCGGAAAACATCAAGCAGCTTTACAAAACAGTCTGGGACATGTCTCA 308012 Query 76773 AGATGAAAGATG-TCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAA 76831 | ||||| |||| || ||||| || || |||| | || | | || ||| || Sbjct 308013 A-----AAGATCATCATCGATATGGCAGCGGACCGTGCACCCTACGTGGACCAATCGCAG 308067 Query 76832 AGTATGAATCTATTCATGGAA-AGTCCAACGATGTCCAAGCTCTCTTCTATGCATATGTA 76890 ||||||||||| ||| || || | | || || || | ||| | | |||||| | || Sbjct 308068 AGTATGAATCTCTTCTTGAAAGACTGCA-CGCTGGCAAAGATGACCAGTATGCACTTCTA 308126 Query 76891 CGCGTGGAAACAGGGGCTCAAAACCGGAATGTACTAT 76927 |||||| || |||| | || || |||||||||||| Sbjct 308127 TGCGTGGGAAAAGGGCTTGAAGACTGGAATGTACTAT 308163 >seq28 Length=771433 Score = 87.8 bits (96), Expect = 2e-12 Identities = 124/172 (72%), Gaps = 2/172 (1%) Strand=Plus/Minus Query 27861 CTCAAGGACAAGTTGTGCGATGCGATCCCCTTTCTTTAC-CTCAAAGTCTTTGTCTCCGT 27919 |||||| | |||||||| || | ||| || || | || ||| ||||| || | | Sbjct 289016 CTCAAGAATGAGTTGTGCAATTCTATCACCCGCGTTAATGCTGAAA-TCTTTATCGCTGA 288958 Query 27920 GATTGAAGAGAACGACTTTGACTTCACCTGTATAGTCGGGATCAATAACACCCGCACCAA 27979 |||||||| || || || ||||| ||| | ||||| | ||||| ||||| ||||| Sbjct 288957 AGTTGAAGAGTACAACCTTAACTTCTCCTCTGTAGTCTGAGTCAATGACACCAGCACCGG 288898 Query 27980 CTTGAATACCATGCTTCACAGCGAGACCGGATCGTGGTGCAACACGACCATA 28031 ||||||||||||||||| || | || |||| |||||| || | ||||| Sbjct 288897 TATGAATACCATGCTTCACCGCTAATCCAGATCTTGGTGCCACTCTTCCATA 288846 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569376286400