Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001005505.1_202015-05-
08] 30 sequences; 12,880,761 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq12 116 3e-21
seq1 109 5e-19
>seq12
Length=1432871
Score = 116 bits (128), Expect = 3e-21
Identities = 169/239 (71%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329
||||||||||| || || || ||||| ||||| || || || ||| | || |||| ||
Sbjct 1192952 AAAATGCAAATTTTCGTTAAGACTTTGACCGGTAAGACTATCACCTTGGAGGTGGAGTCT 1192893
Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389
||| || | | | | || || || ||||| ||||| || || | || |||
Sbjct 1192892 TCCGACACCATTGACAATGTCAAGCAAAAGATCCAAGACAAGGAGGGAATCCCACCAGAT 1192833
Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449
|| || ||| | || | ||| ||||| ||| ||||||||| |||||| || |||| |||
Sbjct 1192832 CAGCAGAGATTGATCTTTGCTGGTAAGCAGTTGGAGGATGGCAGAACTTTGTCGGACTAC 1192773
Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAAAAAATAA 110508
||||| || || || ||||| | ||| |||| || ||| || |||| || || || ||
Sbjct 1192772 AACATCCAGAAGGAGTCTACTCTTCACTTGGTCTTGAGATTGAGAGGTGGTAAGAAGAA 1192714
>seq1
Length=1856900
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329
||||||||||| || || || || || || || || || || ||| | || |||| ||
Sbjct 768032 AAAATGCAAATTTTCGTTAAGACCTTGACGGGTAAGACTATCACCTTGGAGGTGGAGTCT 768091
Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389
|||||| | | | | || || || ||||| || || || || | || |||
Sbjct 768092 TCCGATACCATTGACAATGTCAAGCAAAAGATCCAGGATAAGGAGGGAATTCCACCTGAT 768151
Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449
||||| ||| | || | ||| ||||| ||| ||||||||| ||||| || | || |||
Sbjct 768152 CAACAGAGATTGATCTTTGCTGGTAAGCAGTTGGAGGATGGTAGAACTTTGTCTGACTAC 768211
Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
|||||||| || |||||||| | ||| |||| || ||| || |||| ||
Sbjct 768212 AACATTCAGAAGGAATCTACTCTTCACTTGGTCTTGAGATTGAGAGGAGG 768261
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412841449054790
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |