Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001005505.1_202015-05- 08] 30 sequences; 12,880,761 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq3 141 1e-27 >seq3 Length=433654 Score = 141 bits (156), Expect = 1e-27 Identities = 210/290 (72%), Gaps = 16/290 (6%) Strand=Plus/Plus Query 429518 CGGGTGGACCGTCGAGCGCCACCTGCGCACCGGCGACCCCGTGGTCATGAACCGGCAGCC 429577 |||||||| || ||||| ||| || ||||||||| ||| | | ||| ||||||| Sbjct 64977 CGGGTGGAAAGTGGAGCGGCACTTGATGGACGGCGACCCGGTGCTTTTCAACAGGCAGCC 65036 Query 429578 GTCGCTCCACATGGGGTCGATGCTCAACCACAAGGTGGTGCCCATGCCCGGTCGC-ACCT 429636 |||||| |||| | ||||||| | |||||||||| | ||||| | || | || | Sbjct 65037 GTCGCTTCACAAGATGTCGATGATGTGCCACAAGGTGCGGGTGATGCC-GTTCTCGACGT 65095 Query 429637 TCCGGCTCAACCTGGCCGTGACGGGCACCTACAACGCCGACTTTGACGGCGACGAGATGA 429696 || || ||||| || | |||||| |||||||||||||||| ||||| |||||||||| Sbjct 65096 TCAGGATCAACTTGTCGGTGACGACGCCCTACAACGCCGACTTCGACGGTGACGAGATGA 65155 Query 429697 ACCTGCACGTGCCCCAGTCG---GAGATGGCACGCGCCGAAGTCGCCCACACCATGGGCG 429753 || ||||||| || |||||| |||| | | | || || | | | | | || ||| Sbjct 65156 ACATGCACGTCCCGCAGTCGTACGAGACG--AAG-GCAGAGTTGGAGGAGATC-TGTGCG 65211 Query 429754 TGGCCCTCAAGGC----CGTGTCGCCGCAGGCCAACAAGCCCATCATCGG 429799 || |||||| ||||||||||||| |||||||||| |||| || Sbjct 65212 GTGC---CAAGGCAGATCGTGTCGCCGCAGTCCAACAAGCCGGTCATGGG 65258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916243208763170