Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001005505.1_202015-05-
08] 30 sequences; 12,880,761 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq3 141 1e-27
>seq3
Length=433654
Score = 141 bits (156), Expect = 1e-27
Identities = 210/290 (72%), Gaps = 16/290 (6%)
Strand=Plus/Plus
Query 429518 CGGGTGGACCGTCGAGCGCCACCTGCGCACCGGCGACCCCGTGGTCATGAACCGGCAGCC 429577
|||||||| || ||||| ||| || ||||||||| ||| | | ||| |||||||
Sbjct 64977 CGGGTGGAAAGTGGAGCGGCACTTGATGGACGGCGACCCGGTGCTTTTCAACAGGCAGCC 65036
Query 429578 GTCGCTCCACATGGGGTCGATGCTCAACCACAAGGTGGTGCCCATGCCCGGTCGC-ACCT 429636
|||||| |||| | ||||||| | |||||||||| | ||||| | || | || |
Sbjct 65037 GTCGCTTCACAAGATGTCGATGATGTGCCACAAGGTGCGGGTGATGCC-GTTCTCGACGT 65095
Query 429637 TCCGGCTCAACCTGGCCGTGACGGGCACCTACAACGCCGACTTTGACGGCGACGAGATGA 429696
|| || ||||| || | |||||| |||||||||||||||| ||||| ||||||||||
Sbjct 65096 TCAGGATCAACTTGTCGGTGACGACGCCCTACAACGCCGACTTCGACGGTGACGAGATGA 65155
Query 429697 ACCTGCACGTGCCCCAGTCG---GAGATGGCACGCGCCGAAGTCGCCCACACCATGGGCG 429753
|| ||||||| || |||||| |||| | | | || || | | | | | || |||
Sbjct 65156 ACATGCACGTCCCGCAGTCGTACGAGACG--AAG-GCAGAGTTGGAGGAGATC-TGTGCG 65211
Query 429754 TGGCCCTCAAGGC----CGTGTCGCCGCAGGCCAACAAGCCCATCATCGG 429799
|| |||||| ||||||||||||| |||||||||| |||| ||
Sbjct 65212 GTGC---CAAGGCAGATCGTGTCGCCGCAGTCCAACAAGCCGGTCATGGG 65258
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916243208763170
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |