Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001005505.1_202015-05-
08] 30 sequences; 12,880,761 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq12 140 3e-28
seq1 127 2e-24
seq25 89.7 4e-13
>seq12
Length=1432871
Score = 140 bits (154), Expect = 3e-28
Identities = 176/242 (73%), Gaps = 0/242 (0%)
Strand=Plus/Minus
Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612
|||||||||||||| || || ||||| || || || || || ||| | || |||| ||
Sbjct 1192952 AAAATGCAAATTTTCGTTAAGACTTTGACCGGTAAGACTATCACCTTGGAGGTGGAGTCT 1192893
Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672
||| || | | | | || || |||||||| || || || || | || |||
Sbjct 1192892 TCCGACACCATTGACAATGTCAAGCAAAAGATCCAAGACAAGGAGGGAATCCCACCAGAT 1192833
Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732
||||||||| | || | ||| ||||| ||| ||||||| | || ||| || ||||||||
Sbjct 1192832 CAGCAGAGATTGATCTTTGCTGGTAAGCAGTTGGAGGATGGCAGAACTTTGTCGGACTAC 1192773
Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAAATAATAAA 107792
||||| || ||||||||||| | ||| |||| ||||||||| |||| || || || ||
Sbjct 1192772 AACATCCAGAAGGAGTCTACTCTTCACTTGGTCTTGAGATTGAGAGGTGGTAAGAAGAAG 1192713
Query 107793 AA 107794
||
Sbjct 1192712 AA 1192711
>seq1
Length=1856900
Score = 127 bits (140), Expect = 2e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612
|||||||||||||| || || || || || || || || || ||| | || |||| ||
Sbjct 768032 AAAATGCAAATTTTCGTTAAGACCTTGACGGGTAAGACTATCACCTTGGAGGTGGAGTCT 768091
Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672
|||||| | | | | || || |||||||| ||||| || || | || |||
Sbjct 768092 TCCGATACCATTGACAATGTCAAGCAAAAGATCCAGGATAAGGAGGGAATTCCACCTGAT 768151
Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732
|| |||||| | || | ||| ||||| ||| ||||||| | | ||| || | ||||||
Sbjct 768152 CAACAGAGATTGATCTTTGCTGGTAAGCAGTTGGAGGATGGTAGAACTTTGTCTGACTAC 768211
Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782
|||||||| ||||| ||||| | ||| |||| ||||||||| |||| ||
Sbjct 768212 AACATTCAGAAGGAATCTACTCTTCACTTGGTCTTGAGATTGAGAGGAGG 768261
>seq25
Length=1112461
Score = 89.7 bits (98), Expect = 4e-13
Identities = 175/256 (68%), Gaps = 7/256 (3%)
Strand=Plus/Minus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
|||||||||||||| || || ||||| || || || || || | || || ||
Sbjct 696597 ATGCAAATTTTTGTGAAGACATTAACTGGAAAGACAATCACGTTAGAGGTTGAATCTTCT 696538
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
|| ||| ||| | || || ||||||||| ||||| ||||| | || || |||
Sbjct 696537 GACACTATCGATAATGTTAAGCAAAAGATTCAAGATAAGGAAGGAATTCCACCAGACCAG 696478
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||||| | || | ||| ||||| || |||| |||| | |||| | | || |||||
Sbjct 696477 CAGAGGTTGATATTTGCCGGTAAGCAATTGGAAGACGGAAGAACACTTTCTGATTACAAT 696418
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAAATAATAAAAAT 107795
|||||||| |||||||| | || |||| | || || |||||| | ||| ||||
Sbjct 696417 ATTCAAAAAGAGTCTACTCTTCATTTGGTCCTTAGGTT--GAGGGG--AGGAATGCAAAT 696362
Query 107796 ATTTGTATTTAAAACG 107811
|||| ||||||||
Sbjct 696361 CTTTG---TTAAAACG 696349
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398876654160670
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |