Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001005505.1_202015-05- 08] 30 sequences; 12,880,761 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq12 159 8e-34 >seq12 Length=1432871 Score = 159 bits (176), Expect = 8e-34 Identities = 401/602 (67%), Gaps = 17/602 (3%) Strand=Plus/Minus Query 110302 ACTATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCA 110361 |||| ||||||||||| ||| | |||||| ||||| | | | | ||||| || | Sbjct 863648 ACTACTTTGGTTTCAAGACTTTGGAACGTTCTTATCTGTTGAGAATTAATGGTAAGGTTG 863589 Query 110362 TTGAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTA 110421 |||| | || |||||| | || | | || || | ||||||||||| |||||||| Sbjct 863588 CTGAAAGACCACAACACCTTCTTATGAGAGTGGCCGTCGGTATTCATGGTGATGATATTC 863529 Query 110422 --AAGCTGTTATTGAATGTTATGATGTATTAAGTAAAA-AGAAAGCT-ATTCATGCTACT 110477 ||| |||| |||| ||||| | | || ||| ||| | | | ||||| | Sbjct 863528 CTAAGGTGTTG--GAATCATATGACTTGAT--GTCAAAGAGATACTTCACACATGCATCA 863473 Query 110478 CCTACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGA 110537 || || | || || || || ||| | || || | || ||||| | | | | Sbjct 863472 CCAACGTTGTTCAATGCTGGTACTCCACGCCCTCAGATGTCATCATGCTTCTTAGTTGCA 863413 Query 110538 ATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCT 110597 || || ||||| |||||||||||||| || ||| || | ||| | |||| | |||||| Sbjct 863412 ATGAAAGATGACTCTATTGAAGGTATCTACGATACTTTGAAACAGTGTGCTTTGATTTCT 863353 Query 110598 AAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATC 110657 || | |||| || |||||| ||||| |||| | ||||| || | || | |||| Sbjct 863352 AAGACTGCTGGTGGTATTGGTCTTCACATTCACAACATTCGTTCCACTGGTTCGTATATT 863293 Query 110658 GCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACT 110717 || | || ||| | || | || | |||| ||| | | || |||||| ||| Sbjct 863292 GCCGGTACTAATGGTACATCCAACGGTATAATTCCGATGGTTCGTGTGTTCAACAGTACT 863233 Query 110718 GCAAAATATGTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGCTATCTATCTCGAA 110774 || | ||||||| ||||||||||| |||||| || | ||||||| || | || Sbjct 863232 GCTAGATATGTGGATCAAGGTGGTAACAAGAGACCAGGTGCCATTGCTATTTACTTGGAG 863173 Query 110775 CCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAA 110834 ||||||||| | ||||| || || || | || | | || ||||| || | |||| Sbjct 863172 CCTTGGCATGCTGATATCTTCGACTTTATCGATATCAGAAAGAATCATGG---TAAAGAG 863116 Query 110835 CAAA---GAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGT 110891 | | | ||||||||||| ||| || | |||||| |||||||||| ||||| ||| Sbjct 863115 GAGATTCGTGCACGTGATTTGTTTCCAGCTCTTTGGATTCCAGATTTATTTATGAAGCGT 863056 Query 110892 GT 110893 || Sbjct 863055 GT 863054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186812343818830