Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001005505.1_202015-05-
08] 30 sequences; 12,880,761 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq12 159 8e-34
>seq12
Length=1432871
Score = 159 bits (176), Expect = 8e-34
Identities = 401/602 (67%), Gaps = 17/602 (3%)
Strand=Plus/Minus
Query 110302 ACTATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCA 110361
|||| ||||||||||| ||| | |||||| ||||| | | | | ||||| || |
Sbjct 863648 ACTACTTTGGTTTCAAGACTTTGGAACGTTCTTATCTGTTGAGAATTAATGGTAAGGTTG 863589
Query 110362 TTGAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTA 110421
|||| | || |||||| | || | | || || | ||||||||||| ||||||||
Sbjct 863588 CTGAAAGACCACAACACCTTCTTATGAGAGTGGCCGTCGGTATTCATGGTGATGATATTC 863529
Query 110422 --AAGCTGTTATTGAATGTTATGATGTATTAAGTAAAA-AGAAAGCT-ATTCATGCTACT 110477
||| |||| |||| ||||| | | || ||| ||| | | | ||||| |
Sbjct 863528 CTAAGGTGTTG--GAATCATATGACTTGAT--GTCAAAGAGATACTTCACACATGCATCA 863473
Query 110478 CCTACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGA 110537
|| || | || || || || ||| | || || | || ||||| | | | |
Sbjct 863472 CCAACGTTGTTCAATGCTGGTACTCCACGCCCTCAGATGTCATCATGCTTCTTAGTTGCA 863413
Query 110538 ATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCT 110597
|| || ||||| |||||||||||||| || ||| || | ||| | |||| | ||||||
Sbjct 863412 ATGAAAGATGACTCTATTGAAGGTATCTACGATACTTTGAAACAGTGTGCTTTGATTTCT 863353
Query 110598 AAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATC 110657
|| | |||| || |||||| ||||| |||| | ||||| || | || | ||||
Sbjct 863352 AAGACTGCTGGTGGTATTGGTCTTCACATTCACAACATTCGTTCCACTGGTTCGTATATT 863293
Query 110658 GCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACT 110717
|| | || ||| | || | || | |||| ||| | | || |||||| |||
Sbjct 863292 GCCGGTACTAATGGTACATCCAACGGTATAATTCCGATGGTTCGTGTGTTCAACAGTACT 863233
Query 110718 GCAAAATATGTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGCTATCTATCTCGAA 110774
|| | ||||||| ||||||||||| |||||| || | ||||||| || | ||
Sbjct 863232 GCTAGATATGTGGATCAAGGTGGTAACAAGAGACCAGGTGCCATTGCTATTTACTTGGAG 863173
Query 110775 CCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAA 110834
||||||||| | ||||| || || || | || | | || ||||| || | ||||
Sbjct 863172 CCTTGGCATGCTGATATCTTCGACTTTATCGATATCAGAAAGAATCATGG---TAAAGAG 863116
Query 110835 CAAA---GAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGT 110891
| | | ||||||||||| ||| || | |||||| |||||||||| ||||| |||
Sbjct 863115 GAGATTCGTGCACGTGATTTGTTTCCAGCTCTTTGGATTCCAGATTTATTTATGAAGCGT 863056
Query 110892 GT 110893
||
Sbjct 863055 GT 863054
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186812343818830
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |