Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001005505.1_202015-05-
08] 30 sequences; 12,880,761 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq3 98.7 1e-14
>seq3
Length=433654
Score = 98.7 bits (108), Expect = 1e-14
Identities = 201/295 (68%), Gaps = 3/295 (1%)
Strand=Plus/Minus
Query 1817484 GTCCATGACCAGGCCGATGATGGGCTTGTTGGCCTGCGGCGACACGGTCTTGAGGGCCAC 1817543
|||| ||| | ||| |||| |||||||||| ||||||||||||| ||| | |||
Sbjct 65271 GTCCTGGACAATGCCCATGACCGGCTTGTTGGACTGCGGCGACACGATCTGCCTTGGCAC 65212
Query 1817544 -GTTCATGGTGTGCGTCACCTCGGCGCGCGCGTCTCA-GACTGGGGCACATGGAGGTTCA 1817601
| || | | | | || ||| || || || | ||||| || || || | |||||
Sbjct 65211 CGCACA-GATCTCCTCCAACTCTGCCTTCGTCTCGTACGACTGCGGGACGTGCATGTTCA 65153
Query 1817602 TCTCGTCGCCGTCAAAGTCGGCATTGTAGGTGCCCGTGACGGCCAGGTTGAACCGCATGG 1817661
||||||| ||||| |||||||| ||||||| ||| || | || ||||| || | |
Sbjct 65152 TCTCGTCACCGTCGAAGTCGGCGTTGTAGGGCGTCGTCACCGACAAGTTGATCCTGAACG 65093
Query 1817662 TACGGCCGGGCATGGGCACCACCTTGTGCATGAGCATGGAGCCCATGTGGAGTGAGGGCT 1817721
| | ||||| | ||||||||| | ||| || | |||| || || ||||
Sbjct 65092 TCGAGAACGGCATCACCCGCACCTTGTGGCACATCATCGACATCTTGTGAAGCGACGGCT 65033
Query 1817722 GCCGGTTCATCACCACGGCGTCGCCGGCGCGCAGGTGACGCTCGACTGTCCACCC 1817776
||| ||| | | ||| | ||||||| | || ||| ||||| ||| |||||||
Sbjct 65032 GCCTGTTGAAAAGCACCGGGTCGCCGTCCATCAAGTGCCGCTCCACTTTCCACCC 64978
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177808306444860
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |