Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001005505.1_202015-05-
08] 30 sequences; 12,880,761 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq12 158 1e-33
seq1 140 3e-28
seq25 93.3 4e-14
>seq12
Length=1432871
Score = 158 bits (174), Expect = 1e-33
Identities = 178/236 (75%), Gaps = 2/236 (1%)
Strand=Plus/Plus
Query 134483 CTTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC 134542
||| || ||||| | || ||| || | ||| || || || ||||| || |||||||||||
Sbjct 1192719 CTTACCACCTCTCAATCTCAAGACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTC 1192778
Query 134543 -GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGG 134601
| ||| | | || | || || | ||| || || ||||| ||||| | ||||||||| |
Sbjct 1192779 CGACAAAGTTCTGCCA-TCCTCCAACTGCTTACCAGCAAAGATCAATCTCTGCTGATCTG 1192837
Query 134602 GCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATT 134661
| || || || || || ||||| || ||||| ||||| ||| | |||||||| || |
Sbjct 1192838 GTGGGATTCCCTCCTTGTCTTGGATCTTTTGCTTGACATTGTCAATGGTGTCGGAAGACT 1192897
Query 134662 CCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
|||| || | || || || |||||||| ||||| |||||||||||||||||||||
Sbjct 1192898 CCACCTCCAAGGTGATAGTCTTACCGGTCAAAGTCTTAACGAAAATTTGCATTTTG 1192953
>seq1
Length=1856900
Score = 140 bits (154), Expect = 3e-28
Identities = 171/231 (74%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|||||||| | || ||| || | ||| || || |||||||| |||||||||||||| | |
Sbjct 768261 CCTCCTCTCAATCTCAAGACCAAGTGAAGAGTAGATTCCTTCTGAATGTTGTAGTCAGAC 768202
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| | | | | || || | ||| || || ||||| ||||| | ||| ||||| || ||
Sbjct 768201 AAAGTTCTACCA-TCCTCCAACTGCTTACCAGCAAAGATCAATCTCTGTTGATCAGGTGG 768143
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| || || || || || || ||||| ||||| ||| | || ||||| || |||||
Sbjct 768142 AATTCCCTCCTTATCCTGGATCTTTTGCTTGACATTGTCAATGGTATCGGAAGACTCCAC 768083
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716
|| | || || || ||||| || || || ||||||||||||||||||||
Sbjct 768082 CTCCAAGGTGATAGTCTTACCCGTCAAGGTCTTAACGAAAATTTGCATTTT 768032
>seq25
Length=1112461
Score = 93.3 bits (102), Expect = 4e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570
|| || || || || |||||||| ||||| || || || ||| || | ||
Sbjct 696395 TGAAGAGTAGACTCTTTTTGAATATTGTAATCAGAAAGTGTTCTTCCGTCTTCCAATTGC 696454
Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630
|| || ||||| ||||| | |||||| || || || || ||||| || |||||||| |||
Sbjct 696455 TTACCGGCAAATATCAACCTCTGCTGGTCTGGTGGAATTCCTTCCTTATCTTGAATCTTT 696514
Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690
|| || || || | ||||| || ||||| || || | || || || || || |||
Sbjct 696515 TGCTTAACATTATCGATAGTGTCAGAAGATTCAACCTCTAACGTGATTGTCTTTCCAGTT 696574
Query 134691 AAAGTTTTAACGAAAATTTGCATTTTGTT 134719
|| || || || ||||||||||| ||||
Sbjct 696575 AATGTCTTCACAAAAATTTGCATGATGTT 696603
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505398210475600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |