Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001005505.1_202015-05- 08] 30 sequences; 12,880,761 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq12 158 1e-33 seq1 140 3e-28 seq25 93.3 4e-14 >seq12 Length=1432871 Score = 158 bits (174), Expect = 1e-33 Identities = 178/236 (75%), Gaps = 2/236 (1%) Strand=Plus/Plus Query 134483 CTTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC 134542 ||| || ||||| | || ||| || | ||| || || || ||||| || ||||||||||| Sbjct 1192719 CTTACCACCTCTCAATCTCAAGACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTC 1192778 Query 134543 -GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGG 134601 | ||| | | || | || || | ||| || || ||||| ||||| | ||||||||| | Sbjct 1192779 CGACAAAGTTCTGCCA-TCCTCCAACTGCTTACCAGCAAAGATCAATCTCTGCTGATCTG 1192837 Query 134602 GCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATT 134661 | || || || || || ||||| || ||||| ||||| ||| | |||||||| || | Sbjct 1192838 GTGGGATTCCCTCCTTGTCTTGGATCTTTTGCTTGACATTGTCAATGGTGTCGGAAGACT 1192897 Query 134662 CCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 |||| || | || || || |||||||| ||||| ||||||||||||||||||||| Sbjct 1192898 CCACCTCCAAGGTGATAGTCTTACCGGTCAAAGTCTTAACGAAAATTTGCATTTTG 1192953 >seq1 Length=1856900 Score = 140 bits (154), Expect = 3e-28 Identities = 171/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 |||||||| | || ||| || | ||| || || |||||||| |||||||||||||| | | Sbjct 768261 CCTCCTCTCAATCTCAAGACCAAGTGAAGAGTAGATTCCTTCTGAATGTTGTAGTCAGAC 768202 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | | | || || | ||| || || ||||| ||||| | ||| ||||| || || Sbjct 768201 AAAGTTCTACCA-TCCTCCAACTGCTTACCAGCAAAGATCAATCTCTGTTGATCAGGTGG 768143 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || || || || || || || ||||| ||||| ||| | || ||||| || ||||| Sbjct 768142 AATTCCCTCCTTATCCTGGATCTTTTGCTTGACATTGTCAATGGTATCGGAAGACTCCAC 768083 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 || | || || || ||||| || || || |||||||||||||||||||| Sbjct 768082 CTCCAAGGTGATAGTCTTACCCGTCAAGGTCTTAACGAAAATTTGCATTTT 768032 >seq25 Length=1112461 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570 || || || || || |||||||| ||||| || || || ||| || | || Sbjct 696395 TGAAGAGTAGACTCTTTTTGAATATTGTAATCAGAAAGTGTTCTTCCGTCTTCCAATTGC 696454 Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 || || ||||| ||||| | |||||| || || || || ||||| || |||||||| ||| Sbjct 696455 TTACCGGCAAATATCAACCTCTGCTGGTCTGGTGGAATTCCTTCCTTATCTTGAATCTTT 696514 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 || || || || | ||||| || ||||| || || | || || || || || ||| Sbjct 696515 TGCTTAACATTATCGATAGTGTCAGAAGATTCAACCTCTAACGTGATTGTCTTTCCAGTT 696574 Query 134691 AAAGTTTTAACGAAAATTTGCATTTTGTT 134719 || || || || ||||||||||| |||| Sbjct 696575 AATGTCTTCACAAAAATTTGCATGATGTT 696603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505398210475600