Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001005505.1_202015-05-
08] 30 sequences; 12,880,761 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq12 315 1e-80
seq23 226 4e-54
>seq12
Length=1432871
Score = 315 bits (348), Expect = 1e-80
Identities = 1342/2096 (64%), Gaps = 37/2096 (2%)
Strand=Plus/Plus
Query 68403 TGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACT 68462
|||||||| ||||||||||| || |||| || |||| || || || |||||
Sbjct 861847 TGTACGTAAGTAGTACATACCTGTCTTCAAGCCCTTCTTCCAGCCATAAAAGTGCATGGA 861906
Query 68463 TGTTAGTTTGGAATAACTTGGAT-CGGCTATATGAATATTCATCGATTGACTTTGATCGA 68521
|| | ||| | |||| | || | ||| || ||||| |||||| || ||
Sbjct 861907 AGTCAATTTACCCATAGTTGGTGACTGCAA-ATGGATGTTCATAGATTGAGACTGGCAGA 861965
Query 68522 TGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAG 68581
|| | || || ||||| || ||||| || | | ||| |||| ||| ||||||| |
Sbjct 861966 TGTATGCGCCCCTATCAGCAGCCATAACGATGACAGACTTCTGAGAAATCTCCCAAACTG 862025
Query 68582 TCTTAAAAATCTGTTTGATATCATCTGGAAGGCTCGTA---TTTTGAATGGATCCACCAT 68638
|| | | | || ||||| | ||| |||| | | | || ||||| || || |
Sbjct 862026 TCCTGTACAACTTCTTGATCTTATCGGGAACGTTTGGCAAGTTCTGAATAGAACCGTTGT 862085
Query 68639 CGGATATAATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAA 68698
|| || || | ||||| || |||| ||||| | | | || | | | |||| |
Sbjct 862086 CGTGAATGATGAAGTTCTTCATTGCATCGTTCCATATTCCCATGTCAATAAGATCTCTCA 862145
Query 68699 GGAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTAC 68758
| | |||||||| || || ||||| |||| | ||||| | || || |||
Sbjct 862146 ACATGTAAGGATTAACGATCTGGAATTCACCAGCAAGAACTCTTCTCTGATAGATGTTAG 862205
Query 68759 TGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCA 68818
||| ||||||| | | |||| |||| |||| ||| || | ||| || ||||| ||||
Sbjct 862206 AGGTGAATGGTTCGAAACATTCGTTATAACCCATAATCTGGGAAGTAGAAGCAGTCGGCA 862265
Query 68819 TAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATT-TTATCTTTTAGATGT 68877
||||||||||||| | | |||||||||||| || || | | ||| | || |||
Sbjct 862266 TAGGTGCCACCAAAAGAGAGTTTCTAAGACCA-GTCTTGGCAATCTTAGCCTTCAGAGTA 862324
Query 68878 TTCCAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTA 68937
| ||| ||||| ||||| | || ||||| | ||| ||||||||||| || ||
Sbjct 862325 TCCCAGTCCCACAGATCCGTAGGCTTTTTGTTCCACATATCATATTGTAGAATACCCTTT 862384
Query 68938 CTTGCATATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTT 68997
|| || || | |||||| | ||||| || || | |||| || | |
Sbjct 862385 GAAGCTGGAGAGCCTTCATATGTCTGATAAGTACCCTCTTCCACAGCAAGCTGGTTGGAT 862444
Query 68998 GCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCT 69057
|||| |||||| ||| ||| | || || || |||| | || || || |||| |||
Sbjct 862445 TCCTCCAATGCAGCGTGATACAAGGTCTCAAATATCTGAATGTTAAGCTCCCGTGCATCT 862504
Query 69058 AGACTATCGAATGGATAATGTAA--AAGAATAAATGCATCTGCCAATCCCTGAACCCCAA 69115
||| || || || || | ||| | ||| || | ||| || | ||||| | ||||
Sbjct 862505 GGACAGTCAAAAGG-TAGTCTAAGCATGAAGAAG-GTATCAGCAAGACCCTGGATACCAA 862562
Query 69116 TACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAA 69175
| | |||||||| | |||| | || || | || || |||| ||||| |||||
Sbjct 862563 GAGCAATAGGTCTGTTTCTCATGTTGGAGTTACGGGCCTCAGGAACTGGATAGTAATTTC 862622
Query 69176 TATCTATAATTTTATTAAGATTTCGGACTACTACTTTAACCACGTCCTTT---AGTTTGA 69232
| || |||| || | || ||| || |||||| | || | | | ||
Sbjct 862623 TGTCAATAACACGGTTTAAGTTACGGGTAACAACTTTAGTAA--TCTTGTGCAACTTCTC 862680
Query 69233 GAA----AATCA--AATCGTCCATCTATAACA-AACATATTCAGTGCTACAGATGCTAGA 69285
||| || || ||| ||| | | || |||| | ||| ||| ||| | |
Sbjct 862681 GAAGTTGAACCAGCAATGATCCTCATCTGACTCAACAAAGGCAGGCAAACAAATGTTGGC 862740
Query 69286 ----TTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATT 69341
||||| || | ||||||| | | | || | | | ||| || | ||
Sbjct 862741 CAAGTTACACACACCAACCTCATCTGGAGAGGAGTACTCGACAACCTCACAGCACAAGTT 862800
Query 69342 ACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTA 69401
| ||||||| || |||| || | ||||||||||||| | ||||| || ||||||||
Sbjct 862801 CGAAGATTTGATGGTACCCAAGTTCTTCTGATTACTCTTTCTATTACAAGCATCCTTGTA 862860
Query 69402 AAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCT 69461
| || || || ||||||||||| |||||| || | ||| | ||| | |
Sbjct 862861 GATCATGAAAGGTGTACCAGTTTCTGTCTGAGCCTCCAAAATCTGGTACCATAACTTCTG 862920
Query 69462 AGCATTTATTACGGTCTTGTAACGCTTC--TCTTTTTCATATTGTGTATATAGCCGTTCG 69519
||| || | | | |||| | | | || ||||| || || | || || | |||
Sbjct 862921 AGCCTTCACT--GTTCTTCTTCCACGTCCTTCTTTCTCGTAACGAGTGTACAATTTCTCG 862978
Query 69520 AATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCAC 69579
|| || || || ||||||| | || || ||| ||| | | ||||| ||||
Sbjct 862979 AACTCGTCACCGTAAACATCTGAGAGACCTGGTGCCTCAGAAGGAGAGAACAATGTCCAC 863038
Query 69580 ACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGA 69639
|| | || || || |||||||||| ||| ||||||||||||||| ||| | |
Sbjct 863039 TTGTCGTTGCTCTCCACACGCTTCATAAATAAATCTGGAATCCAAAGAGCTGGAAACAAA 863098
Query 69640 TCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATA 69699
|| | | | | | || || || || ||| ||| | | ||||| ||| || | |||
Sbjct 863099 TCACGTGCACGAATCTCCTCTTTACCATGATTCTTTCTGATATCGATAAAGTCGAAGATA 863158
Query 69700 TCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGA 69759
|||| |||||| || || | || || || ||| | || |||| || || || || |||
Sbjct 863159 TCAGCATGCCAAGGCTCCAAGTAAATAGCAATGGCACCTGGTCTCTTGTTACCACCTTGA 863218
Query 69760 TCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTA 69819
|| | ||||| ||||| | || | || | | ||||||||| ||||| || ||| ||
Sbjct 863219 TCCACATATCTAGCAGTACTGTTGAACACACGAACCATCGGAATTATACCGTTGGATGTA 863278
Query 69820 CCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATT 69879
||||| || || | |||||| || | | ||||| || ||| ||||| ||
Sbjct 863279 CCATTAGTACCGGCAATATACGAACCAGTGGAACGAATGTTGTGAATGTGAAGACCAATA 863338
Query 69880 CCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATG 69939
|| || || | ||||| || | |||||| ||||||| || || || ||||| || ||
Sbjct 863339 CCACCAGCAGTCTTAGAAATCAAAGCACACTGTTTCAAAGTATCGTAGATACCTTCAATA 863398
Query 69940 CTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCA 69999
|||||| |||| || | || || ||||| ||| | || ||| || |||
Sbjct 863399 GAGTCATCTTTCATTGCAACTAAGAAGCATGATGACATCTGAGGGCGTGGAGTACCAGCA 863458
Query 70000 TTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATG-TTTC 70058
|| || || || || ||||| || ||||| || | | || | || | |||| || |
Sbjct 863459 TTGAACAACGTTGGTGATGCATGTGTGAAGTATCTCTTTGACATCAAGTCATATGATTCC 863518
Query 70059 AATAGCTGATTCTATATC-CCACTGATGAATTCCTATCGCGACACGCATCAACATATGCT 70117
|| | || | ||||| ||| |||||| || | || || | ||| | | || |
Sbjct 863519 AACACCTTA-GGAATATCATCAC-CATGAATACCGACGGCCACTCTCATAAGAAGGTGTT 863576
Query 70118 GAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAA 70177
| |||| ||| | ||| ||| ||| ||||||| || || ||||| ||| || |
Sbjct 863577 GTGGTCTTTCAGCAACCTTACCATTAATTCTCAACAGATAAGAACGTTCCAAAGTCTTGA 863636
Query 70178 ACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCT 70237
| ||||| |||||||| ||||| | |||||| |||| | || || | | |||||
Sbjct 863637 AACCAAAGTAGTTGTAACTGAAGTCACGGTCGTAATTAATGGCTGAGTTCAACTCATCCT 863696
Query 70238 TATATTTGGTAACTATATCCATAACAGTAGGTGAGATAATCGGAGATCGTTTACCATTTT 70297
||| | |||| || | ||| | || || || ||||| || | |
Sbjct 863697 TATGCTCCATAACAATCTTATAAACCTCATCAGAAATCATAGGAGACTTCTTCTGGGTCT 863756
Query 70298 TAGGATTAACATAGTTGAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCT 70357
| ||||| |||||| ||| ||| || || |||||| || | || || || | ||
Sbjct 863757 TTGGATTGTAGTAGTTGTATAGATCCTCTATAACATCAGAGAAAGGCTTCTTAGTCTGCT 863816
Query 70358 TGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATGTTGTGTAG 70417
|||| |||||||| || || | ||| || || | | |||||||||| ||||| ||| |
Sbjct 863817 TGTGCAAATTTGAGATTGCAAGTCTAGCGGCCAAAGTAGCATAGTCTGGATGCATTGTGG 863876
Query 70418 TACAAGTA-GCTGCTATTTCCGCAGCTAACGTATCTAATTCTATAGTTGTAACTCC 70472
| || ||| ||||| |||| |||| || | || || || || || ||||| ||
Sbjct 863877 T-CATGTATGCTGCAGTTTCAGCAGTCAAATTGTCCAACTCAATGGTGGTAACACC 863931
>seq23
Length=1356690
Score = 226 bits (250), Expect = 4e-54
Identities = 602/909 (66%), Gaps = 17/909 (2%)
Strand=Plus/Minus
Query 39303 CTTCTTGTGACATAACTCCCATTTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAG 39362
|| |||| | |||||| || || ||||| || ||| | ||||| || |||||||
Sbjct 991545 CTCCTTG-GCCATAACACCGGCCTTCTGGTAGTCGGAAACTCTCTTCTCAAAGAAATTAG 991487
Query 39363 TTTTGCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTAGTTGCATTATAttttt 39422
| || || |||| || |||||||||||||| || || ||||| || | || || |
Sbjct 991486 TCTTACCAGCCAAGGAGATATTTTCCATGAAGTCGAATGGATTTGTGACGTTGTAAACCT 991427
Query 39423 ttttAAATCCTAATTCTGAAATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCA 39482
| | |||| ||| | || ||| || || ||| || || | ||| |||||
Sbjct 991426 TCTCGCATCCCAATGCGATAAGCAACCTGTCGGCACAGAACTCAACGTACTGAGCCATCA 991367
Query 39483 TTTCACAATTCATTCCTATGAGTTTAACTGGTAGAGCCTCCGTT-AGAAACTCTTTTTCG 39541
| || | ||||| || | | |||||| ||||| || | ||||| | ||| ||
Sbjct 991366 TATCGAAGTTCATACCGAGTAAAGAAACTGGAAGAGCGTCTCTCCAGAAAGT-TTTCTCA 991308
Query 39542 ATGTCTACGGCCTCTGTTATTATCGA--TGTTACT-ACCTCATCACTCGGTGGATGCAAT 39598
|| | || ||||| || || || || || | |||| | || |||||||||
Sbjct 991307 ATATTAACAGCCTCGGTCATGATTCTCTTGATAATGACCTTA---CTTGGTGGATGCTTC 991251
Query 39599 AAATGTTTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAAT 39658
|| || |||| | ||| || || || |||||| ||||||||||| | || |
Sbjct 991250 AAGTGAGAGAACAAAAGGCATGCAAAATCGGTATGTAGACCCTCATCTCTGCAGATAAGC 991191
Query 39659 TCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCA 39718
|||||||| || || || || ||||| | ||| | ||| || | ||| || |||| |||
Sbjct 991190 TCGTTAGAGAACGTAAGGCCTGGCATCAAACCTCTCTTCTTCAACCAGAAGATGGAGGCA 991131
Query 39719 AAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGT-- 39776
|| |||||||| || || | ||||| | || ||||| ||||| | |||||| | |
Sbjct 991130 AACGATCCAGAGAAAAACACACCTTCAATGGCAGCAAAAGCAACCAATCTCTCAGCATAC 991071
Query 39777 -AACTTGTATCATTATGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGC 39835
|| |||||| | |||||| || ||||| ||| |||| ||| | | ||
Sbjct 991070 AAAGCATCATCATTGTTTATCCATCTCAAAGCCCATAAAGCCTTCTCCTTAATAGGTGGA 991011
Query 39836 ATTGTTTCTATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCT 39895
||||| | || ||||| || | || | || | | || | | ||| || ||
Sbjct 991010 ATTGTATGGATGGCATTGAACAAGTAGTCGGACTCTTTCTTGTCAGTGATATAGGTCTCG 990951
Query 39896 ATTAACAGACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAA 39955
|| || || ||| | || || |||||||| |||| | ||||| || || || ||
Sbjct 990950 ATCAAAAGGGAATAAGTCTCAGAGTGGATGTTCTCAACCATAATCTGGAAACCATAGAAG 990891
Query 39956 CATCTTGCTTCAGTAATTTGTACCT-CTGAACAAAATCTTTCCGCCAAATTTTCATTCAC 40014
|||||| |||| | || |||| || | ||| | | | |||||||| |||| ||
Sbjct 990890 GCTCTTGCCTCAGGTAACTGCACCTGCTTCATAAAGT-TCTGTGCCAAATTCTCATCGAC 990832
Query 40015 TATTCCATCACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGG 40074
|| ||||| ||||||||| || ||||| ||| | || || ||| | |||| ||
Sbjct 990831 AATACCATCTGAAGCGGCAAAGAAGGCCAAGACACGAGAGATGAAGTATCTCTCATTGGC 990772
Query 40075 TGTCAATTT---ATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCA 40131
||| || ||||||||| | | ||| ||||| | ||| | || || || |||||
Sbjct 990771 ATTCATCTTGTCATTCCAGTCGGTCAAATCCTTTGAGAGATCGATCTCCTCGGCAGTCCA 990712
Query 40132 AAACGACGCCTCTGCCTTTTTGTACATGTTCCATATATCACGATATTGTATTGGAAAAAT 40191
|| || ||||| ||||| |||||||| | |||||||||| || || || || || ||
Sbjct 990711 GAAAGAGGCCTCGGCCTTCTTGTACATTTGCCATATATCATCGTACTGAATAGGGAACAT 990652
Query 40192 AACAAATCT 40200
|| |||||
Sbjct 990651 CACGAATCT 990643
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686908542409200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |