Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001005505.1_202015-05-
08] 30 sequences; 12,880,761 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq1 132 4e-26
seq23 131 1e-25
>seq1
Length=1856900
Score = 132 bits (146), Expect = 4e-26
Identities = 289/430 (67%), Gaps = 16/430 (4%)
Strand=Plus/Plus
Query 19360 TATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAAA---TTACTT 19416
||||| || || ||| ||||| || |||||||| ||| || || ||||| ||| |
Sbjct 590547 TATGGACCTCCAGGTACAGGAAAGACTTTAATTGCTAGACAAATTGGTAAAATGTTAAAT 590606
Query 19417 ACAAAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAA 19476
| || | || |||||||| ||||||||||||||||| |||||||| |||
Sbjct 590607 GCTAAGGAGCCA---AAAATTGTCAATGGTCCTGAAATCTTGTCCAAATATGTTGGTTCT 590663
Query 19477 TCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGG 19536
|||||||| || | || ||||||| || || || | |||| | || | ||||
Sbjct 590664 TCGGAAGAGAACATTAGAAATTTGTTTAAAGATGCAGAGGCAGAATACAAGCAGAAAGGG 590723
Query 19537 CGCAAAAGT--TCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAA 19594
| || || | || ||||| ||| | || || ||||| | || | ||||||
Sbjct 590724 G--ATGCGTCGTCCCTTCATATTATTATATTTGACGAGTTGGATTCTATATTCAAGCAAC 590781
Query 19595 GAGGTTC------TGGTGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAA 19648
| ||||| || || | ||| || |||| ||| || |||||| | || | |
Sbjct 590782 GTGGTTCGAGAGGTGATGGTACTGGTGTTGCCGACAATGTGGTGAATCAATTGCTTGCTA 590841
Query 19649 AATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGG 19708
| | || |||||| | || || || |||||| |||| ||||| |||||||||||| ||
Sbjct 590842 AGATGGATGGTGTTGATCAGCTAAACAATATTCTAGTCATTGGAATGACTAATAGAAGGG 590901
Query 19709 AATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACT 19768
| ||||| || || ||| | || || || | || ||| | || | |||||| | |
Sbjct 590902 ATTTAATTGATGAAGCATTACTTCGTCCTGGAAGATTTGAAGTGCAGGTTGAAATTCATT 590961
Query 19769 TACCCGATGA 19778
|||| |||||
Sbjct 590962 TACCTGATGA 590971
>seq23
Length=1356690
Score = 131 bits (144), Expect = 1e-25
Identities = 382/584 (65%), Gaps = 12/584 (2%)
Strand=Plus/Plus
Query 43707 TGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTT 43766
|||| || ||||| || |||| ||||||||||||||||| || || |||| || || |
Sbjct 990653 TGTTCCCTATTCAGTACGATGATATATGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCT 990712
Query 43767 GGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTGC----ATTAAAA 43822
|||| || || || | ||| | | || || || | | |||| || || ||
Sbjct 990713 GGACTGCCGAGGAGATCGATCTCTCAAAGGATTTGACCGACTGGAATGACAAGATGAATG 990772
Query 43823 CCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATA 43882
||| | || | | | || || ||| || ||||| || ||||| || || || ||
Sbjct 990773 CCA-ATGAGAGATACTTCATCTCTCGTGTCTTGGCCTTCTTTGCCGCTTCAGATGGTATT 990831
Query 43883 GTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGT 43942
||| |||| ||||||| ||| | | | || || ||||| || ||| ||
Sbjct 990832 GTCGATGAGAATTTGGCACAGAACTTTATGAAGCAGGTGCAGTTACCTGAGGCAAGAGCC 990891
Query 43943 TTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATA 44002
|| ||||| || || ||| | || || || || || || | || ||| ||||
Sbjct 990892 TTCTATGGTTTCCAGATTATGGTTGAGAACATCCACTCTGAGACTTATTCCCTTTTGATC 990951
Query 44003 GATACGTACATCAAAGATGGGCACGAGAAGCATCGATTGTTTAATGCGATAGAAACAGTA 44062
|| || || |||| || | | ||| | ||||| ||||| || | ||| |
Sbjct 990952 GAGACCTATATCACTGACAAGAAAGAGTCCGACTACTTGTTCAATGCCATCCATACAATT 991011
Query 44063 CCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAA--ATGATTCTT 44120
|| | ||||| | || || ||||| | | ||||||||| ||| ||||| |||
Sbjct 991012 CCACCTATTAAGGAGAAGGCTTTATGGGCTTTGAGATGGATAAA--CAATGATGATGCTT 991069
Query 44121 T---TGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGT 44177
| || || || | || || ||||| | | ||||| | || || || |||||||
Sbjct 991070 TGTATGCTGAGAGATTGGTTGCTTTTGCTGCCATTGAAGGTGTGTTTTTCTCTGGATCGT 991129
Query 44178 TTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATG 44237
|||| |||| || ||||| ||||| ||||||||||||| || | ||||| || || |
Sbjct 991130 TTGCCTCCATCTTCTGGTTGAAGAAGAGAGGTTTGATGCCAGGCCTTACGTTCTCTAACG 991189
Query 44238 AGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGC 44281
|| | || | | ||||| || ||||| ||||||||| |||
Sbjct 991190 AGCTTATCTGCAGAGATGAGGGTCTACATACCGATTTTGCATGC 991233
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397455854680150
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |