Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001005505.1_202015-05-
08] 30 sequences; 12,880,761 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq12 219 5e-52
seq26 134 2e-26
seq28 87.8 2e-12
>seq12
Length=1432871
Score = 219 bits (242), Expect = 5e-52
Identities = 1120/1756 (64%), Gaps = 61/1756 (3%)
Strand=Plus/Plus
Query 110369 TAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTTG 110428
|||||||| || ||||| | || | ||||| | || | ||||| |||| | ||
Sbjct 861857 TAGTACATACCTGTCTTCAAGCCCTTCTTCCAGCCATAAAAGTGCATGGAAGTCAATTTA 861916
Query 110429 GACATCGTTGG--ACTTTCCATGAAGAGGTTCATACTTTGACTTTGGTCAATGAA-GCGC 110485
||| ||||| ||| ||| || ||||||| |||| ||| ||| | ||||
Sbjct 861917 CCCATAGTTGGTGACTGCAAATG--GATGTTCATAGATTGAGACTGGCAGATGTATGCGC 861974
Query 110486 CCCCGTTGTGCCGCCATATCAATGACATCCTTCATCTTAATTTCCCAAACTGTGCGATAG 110545
||| | || |||||| | |||||| |||| ||| ||||||||||| | ||
Sbjct 861975 CCCTATCA-GCAGCCATAACGATGACAGACTTCTGAGAAATCTCCCAAACTGTCCTGTAC 862033
Query 110546 AGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCACC 110605
| |||||||| | ||| || | | || | ||||| || ||||| | | |
Sbjct 862034 AACTTCTTGATCTTATCGGGAACGTTTGGCAAGTTCTGAATAGAACCGTTGTCGTGAATG 862093
Query 110606 ATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGC 110665
|||| | |||||| | | | ||| | || || | | || || | | | ||
Sbjct 862094 ATGAAGTTCTTCATTGCATCGTTCCATATTCCCATGTCAATAAGATCTCTCAACATGTAA 862153
Query 110666 TTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTAT 110725
|| || || || ||||| || || ||||||| | |||||||| | ||| ||
Sbjct 862154 GGATTAACGATCTGGAATTCACCAGCAAGAACTCTTCTCTGATAGATGTTAGAGGTGAAT 862213
Query 110726 GGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCC 110785
||||| || ||||| |||| ||||| || || | || || || || ||||| ||||||
Sbjct 862214 GGTTCGAAACATTCGTTATAACCCATAATCTGGGAAGTAGAAGCAGTCGGCATAGGTGCC 862273
Query 110786 ATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCG 110845
| ||||||| ||| | |||||| ||| || |||| ||| |||||||||
Sbjct 862274 ACCAAAAGAGAGTTTCTAAGACCAGTCTTGGCAATCTTAGCCTTCAGAGTATCCCAGTCC 862333
Query 110846 TAGTTGAGC--TTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGG 110903
| || | | || || |||| |||| ||| | || || | || | || || |
Sbjct 862334 CACA-GATCCGTAGGCTTTTTGTTCC-ACATATCATATTGTAGAATACCCTTTGAAGCTG 862391
Query 110904 GAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCA 110963
|||| || ||| | || | ||| | ||| | | |||| | | | ||||||
Sbjct 862392 GAGAGCCTTCATATGTCTGATAAGTACCCTCTTCCACAGCAAGCTGGTTGGATTCCTCCA 862451
Query 110964 GGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAA- 111022
| |||||||||| ||| ||||| || || || | |||| || ||||| |
Sbjct 862452 ATGCAGCGTGATACAAGGTCTCAAATATCTGAATGTTAAGCTCCCGTGC---ATCTGGAC 862508
Query 111023 --TCAAATGCGTAGCGGCA-CAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCA 111079
||||| | |||| | || | || ||| || ||||| || | ||| | | ||
Sbjct 862509 AGTCAAAAG-GTAGTCTAAGCATGAAGAAGGTATCAGCAAGACCCTGGATACCAAGAGCA 862567
Query 111080 ATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTG 111136
|||||||||| || ||| || || || || || |||| || ||||| ||||||||
Sbjct 862568 ATAGGTCTGTTTCTCATGTTGGAGTTACGGGC---CTCAGGAACTGGATAGTAATTTCTG 862624
Query 111137 TCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAA 111196
||||| || ||||||| || |||||||| || || || | || | || || |
Sbjct 862625 TCAATAACACGGTTTAAGTTACGGGTAACAACTTTAGTAATCTTGTGCAACTTCTCGAAG 862684
Query 111197 TCAAAAGTGCGAGTCTCTTCAT-TGACATA-CTTTGGAAGGG---CGATTGATG-CCAAA 111250
| || || | || |||| |||| | | || ||| | | || || ||||
Sbjct 862685 TTGAACCAGCAATGATCCTCATCTGACTCAACAAAGGCAGGCAAACAAATGTTGGCCAAG 862744
Query 111251 TTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAA 111310
|| || ||| | |||||| | | |||||| | || || || ||||| |||
Sbjct 862745 TTACACACACCAACCTCATCTGGAGAGGAGTACTCGACAACCTCACAGCACAAGTTCGAA 862804
Query 111311 CTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGC 111370
|| || || ||||| ||||| || |||||||| | || || ||||||||||||| |
Sbjct 862805 GATTTGATGGTACCCAAGTTCTTCTGATTACTCTTTCTATTACAAGCATCCTTGTAGATC 862864
Query 111371 ATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCGGC 111429
||| | || || || || || ||||| | | | ||| | ||| ||| || | | |
Sbjct 862865 ATGAAAGGTGTACCAGTTTCTGTCTGAGCCTCCAAAATCTGGTACCATAACTTCTGAGCC 862924
Query 111430 TGGTACAATGGCGTTGGCCC--GTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAAC 111487
| || || || || |||| || |||||| ||||| | || |||
Sbjct 862925 TT---CACTGTTCTTCTTCCACGTCCTTCTTTCTCGTAACGAGTGTACAATTTCTCGAAC 862981
Query 111488 TCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAA-AGAGACCATTG 111546
|| ||||| | || |||||||||||||||| ||||| ||||| || ||
Sbjct 862982 TCGTCACCGTAAACATCTGAGAGACCTGGTGCCT--------CAGAAGGAGAGAACAATG 863033
Query 111547 ACCACCT-TC------CTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAA 111599
|||| | || ||| || |||||||| || | ||||||||||| || | || ||
Sbjct 863034 TCCACTTGTCGTTGCTCTCCACACGCTTCATAAATAAATCTGGAATCCAAAGAGCTGGAA 863093
Query 111600 AGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCC 111658
| | ||| | | || ||| ||| || | ||| || || || | || | || ||
Sbjct 863094 ACAAATCACGTGCA-CGAATCTCCTCTTTACCATGATTCTTTCTGATATCGATAAAGTCG 863152
Query 111659 ATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCC 111714
| |||||| || ||||| ||||| | || | || || | || || | | ||
Sbjct 863153 AAGATATCAGCATGCCAAGGCTCCAAGTAAATAGCAATGGCACCTGGTCTCTTG-TTACC 863211
Query 111715 AGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATC 111774
| |||||| ||||| | || || ||| || || |||| ||| ||||| ||||| |
Sbjct 863212 ACCTTGATCCACATATCTAGCAGTACTGTTGAACACACGAACCATCGGAATTATACCGTT 863271
Query 111775 TGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCAT 111834
||| |||||| || || |||| || | ||| | | | || ||||| |
Sbjct 863272 GGATGTACCATTAGTACCGGCAATATACGAACCAGTGGAACGAATGTTGTGAATGTGAAG 863331
Query 111835 CCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACC 111894
|||||||| ||||| ||| || || ||||||| | | ||| | ||||||||
Sbjct 863332 ACCAATACCACCAGCAGTCTTAGAAATCAAAGCACACTGTTTCAAAGTATCGTAGATACC 863391
Query 111895 GTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGT 111954
| || ||||| || || | || | | |||||| |||||||| || | ||| ||
Sbjct 863392 TTCAATAGAGTCATCTTTCATTGCAACTAAGAAGCATGATGACATCTGAGGGCGTGGAGT 863451
Query 111955 ACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGT 112013
|||||||||||| | ||||||| ||| || |||| || || | |||||| ||| |
Sbjct 863452 ACCAGCATTGAACAACGTTGGTGATGCATGTGTGAA-GTATCTCTTTGACATCAAGTCAT 863510
Query 112014 ATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACA 112073
||| ||||| || | ||| || || || || || |||| || || | ||| | |
Sbjct 863511 ATGATTCCAACACCTTAGGAATATCATCACCATGAATACCGACGGCCACTCTCATAAGAA 863570
Query 112074 TGTACTGTGGGGTTTC 112089
|| ||||| ||||
Sbjct 863571 GGTGTTGTGGTCTTTC 863586
>seq26
Length=1546578
Score = 134 bits (148), Expect = 2e-26
Identities = 302/443 (68%), Gaps = 12/443 (3%)
Strand=Plus/Minus
Query 111251 TTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAA 111310
||||| || || |||| ||||| || |||||| | || ||| || | |||||
Sbjct 307262 TTGCACACGGCGATCTCGTCCTTGGATGAGTACTCGACAACTTCGCAGCAGAGATTGGAC 307203
Query 111311 CTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGC 111370
||| || || || | ||||| || || |||| ||||||| |||||| || ||
Sbjct 307202 GACTTGATGGTTCCAAGGTTCTTCTGATTCGACTTCGCATTGCACGAATCCTTATAAAGG 307143
Query 111371 ATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAACATCGGCGGCT 111430
| | | ||||| || ||||| ||||| || | ||||| || ||| || | | |||
Sbjct 307142 AGGAAAGGCGTTCCTGTCTCGGTCTGAGAATAAAGAATCCTCTCCCACACCTTGCGGGCC 307083
Query 111431 GGTACAA-TGGCGTTGGC-CCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACT 111488
| ||| || ||| | ||| || || ||||||| |||||| |||| ||||||||
Sbjct 307082 --TTCAACTGCCGTAGATACCGGCCTTCTTTTTCGTACTGTGTGTACAGGGATTCAAACT 307025
Query 111489 CCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGAC--CAT-T 111545
| |||| ||| || || |||||||| ||| | |||||||||||| || |
Sbjct 307024 CGGGACCCCATTTGTCTGATAGTCCTGGTGC--TGTATCCTCAGAAAAGAGACTCCACAT 306967
Query 111546 GACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGAT 111605
| | ||| ||| | ||| ||||||| ||||| |||||||||| | |||||||||
Sbjct 306966 CTCGTCATTCTTCA-CACGCCTCATGAACAGGTCCGGAATCCACAACGCATAAAAGAGAT 306908
Query 111606 CTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAAC-TCAAGGAACTCCATGATA 111664
| || ||| || || | || ||||| || | | || ||||| |||| |||
Sbjct 306907 CCCTTGCCCGCATTTCCTCCTTGCCGTGGTTCT-TCTTGAGGTCGAGGAATTCCAGAATA 306849
Query 111665 TCCGCGTGCCATGGCTCAAGATA 111687
||||| ||||| |||||||||||
Sbjct 306848 TCCGCATGCCAGGGCTCAAGATA 306826
>seq28
Length=771433
Score = 87.8 bits (96), Expect = 2e-12
Identities = 124/172 (72%), Gaps = 2/172 (1%)
Strand=Plus/Plus
Query 164604 TATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCG 164663
||||| | || |||||| |||| || | || ||||||||||||||||| |||||
Sbjct 288846 TATGGAAGAGTGGCACCAAGATCTGGATTAGCGGTGAAGCATGGTATTCATACCGGTGCT 288905
Query 164664 GGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGAC 164723
||||| ||||| | ||||| | ||| ||||| || || || |||||||| | | ||
Sbjct 288906 GGTGTCATTGACTCAGACTACAGAGGAGAAGTTAAGGTTGTACTCTTCAACTTCAGCGAT 288965
Query 164724 AAAGACTTTGAG-GTAAAGAAAGGGGATCGCATCGCACAACTTGTCCTTGAG 164774
||||| ||| || | || || ||| | || |||||||| | ||||||
Sbjct 288966 AAAGA-TTTCAGCATTAACGCGGGTGATAGAATTGCACAACTCATTCTTGAG 289016
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628031764488000
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