Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001005505.1_202015-05-
08] 30 sequences; 12,880,761 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq12 111 2e-19
>seq12
Length=1432871
Score = 111 bits (122), Expect = 2e-19
Identities = 659/1045 (63%), Gaps = 33/1045 (3%)
Strand=Plus/Plus
Query 78188 GTGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATAC 78247
|||| || || |||||||| || ||||| | ||||||||||| || || | ||||||
Sbjct 861846 GTGTACGTAAGTAGTACATACCTGTCTTCAAGCCCTTCTTCCAGCCATAAAAGTGCATGG 861905
Query 78248 TCGACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGA 78307
| || || ||| | | || || || |||||| | || || |||||| ||
Sbjct 861906 AAGTCAATTTACCCATAGTTGGTGACTGCAAATGGATGTTCATAGATTGAGACTGGCAGA 861965
Query 78308 TGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGG 78367
|||| || || | || || ||||| ||||||| ||||| || | ||||||||| | |
Sbjct 861966 TGTATGCGCCCCTATCAGCAGCCATAACGATGACAGACTTCTGAGAAATCTCCCAAACTG 862025
Query 78368 TCCGGTAAATGGCCTTCAGCTCTTCCTGGATGTCCAGC--GCT-TGTACGCTCCCACCGG 78424
||| ||| | ||| | || || | | || || | | || | || |
Sbjct 862026 TCCTGTACAACTTCTTGATCTTATCGGGAACGTTTGGCAAGTTCTGAATAGAACCGTTGT 862085
Query 78425 CTCGCACAATTTCATTCTTAATTTGAGGGTTCCAGCGATT--GATCTTCTGAAGATCCCG 78482
| | | || ||||| ||| | |||||| ||| || | |||||| |
Sbjct 862086 CGTGAATGATGAAGTTCTTCATTGCATCGTTCCA--TATTCCCATGTCAATAAGATCTCT 862143
Query 78483 GACCAGGTGCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTT 78542
| || || | |||| || ||| || || || || | | | | ||||||||
Sbjct 862144 CAACATGTAAGGATTAACGATCTGGAATTCACCAGCAAGAACTCTTCTCTGATAGATGTT 862203
Query 78543 GGTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGG 78602
| ||| | || |||||| ||||| | ||||| ||||||| || || || |||||
Sbjct 862204 AGAGGTGAATGGTTCGAAACATTCGTTATAACCCATAATCTGGGAAGTAGAAGCAGTCGG 862263
Query 78603 CATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTG---ATCTCGACCTTTAG 78659
||| ||||| |||| ||||| || | ||||||| |||||| |||| |||| ||
Sbjct 862264 CATAGGTGCCACCAAAAGAGAGTTTCTAAGACCA---GTCTTGGCAATCTTAGCCTTCAG 862320
Query 78660 ------GCCGTCCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAGGATACC 78713
| |||||| | || | | | | |||||| || ||| || |||||
Sbjct 862321 AGTATCCCAGTCCCACAGATCCGTAGGCTTTTTGTTCCACATATCATATTGTAGAATACC 862380
Query 78714 CTCGGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCA 78773
|| || || || || || | | |||| |||| ||||| ||| || || | |
Sbjct 862381 CTTTGAAGCTGGAGAGCCTTCATATGTCTGATAAGTACCCTCTTCCACAGCAAGCTGGTT 862440
Query 78774 TGACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGC 78833
|| || || || ||||| |||| | ||| || || |||| ||||| || ||
Sbjct 862441 GGATTCCTCCAATGCAGCGTGATACAAGGTCTCAAATATCTGAATGTTAAGCTCCCGTGC 862500
Query 78834 CT-TGGTCTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACGC 78892
| ||| | ||| || | || | ||||| | |||| ||| || || ||||||| |
Sbjct 862501 ATCTGGAC-AGTCAAAAGGTAGTCTAAGCATGAAGAAGGTATCAGCAAGACCCTGGATAC 862559
Query 78893 CGATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTCGGGTAAAAGT 78952
| | ||| || |||| || | ||||||| || |||||| | || || | |
Sbjct 862560 CAAGAGCAATAGGTCTGTTTCTCATGTTGGAGTTACGGGCCTCAGGAACTGGATAGTAAT 862619
Query 78953 TCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATTTGG 79012
| | || || || ||||| | |||||| || || || ||| | || || ||| ||
Sbjct 862620 TTCTGTCAATAACACGGTTTAAGTTACGGGTAACAACTTTAGTAATCTTGTGCAACTTCT 862679
Query 79013 CGA-----AATCA-AAATGAT-TTCCTTTGA-TGAAAGTCGGTAGGCACAGCGAT----G 79060
||| || || |||||| || | ||| | || || ||||| | || |
Sbjct 862680 CGAAGTTGAACCAGCAATGATCCTCATCTGACTCAACAAAGGCAGGCAAACAAATGTTGG 862739
Query 79061 CCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAAT 79120
||| ||| ||||| | ||| || || || ||||| | || |||||| |
Sbjct 862740 CCAAGTTACACACACCAACCTCATCTGGAGAGGAGTACTCGACAACCTCACAGCACAAGT 862799
Query 79121 TAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGT 79180
| || || |||||||| || | ||||||||| || ||||| ||||| || |||||||
Sbjct 862800 TCGAAGATTTGATGGTACCCAAGTTCTTCTGATTACTCTTTCTATTACAAGCATCCTTGT 862859
Query 79181 AGCACATGTACGGCGTCCCGGTCTC 79205
|| |||| | || || || || ||
Sbjct 862860 AGATCATGAAAGGTGTACCAGTTTC 862884
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548524594303200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |