Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001005505.1_202015-05-
08] 30 sequences; 12,880,761 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq12 118 1e-21
>seq12
Length=1432871
Score = 118 bits (130), Expect = 1e-21
Identities = 321/481 (67%), Gaps = 8/481 (2%)
Strand=Plus/Minus
Query 53249 TACGACTTAATGAGCCAAAAG-TACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGG 53307
|| ||||| ||| | || || ||||| || || || | ||||| ||||||| |||||
Sbjct 863511 TATGACTTGATGT-CAAAGAGATACTTCACACATGCATCACCAACGTTGTTCAATGCTGG 863453
Query 53308 TACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGA 53367
||| | |||||||||||| |||||| | || || ||||| |||||||| || ||
Sbjct 863452 TACTCCACGCCCTCAGATGTCATCATGCTTCTTAGTTGCAATGAAAGATGACTCTATTGA 863393
Query 53368 CGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGG 53427
|| |||||||| || | || ||||||| || || ||| | |||||||| ||
Sbjct 863392 AGGTATCTACGATACTTTGAAACAGTGTGCTTTGATTTCTAAGACTGCTGGTGGTATTGG 863333
Query 53428 TATCCAC-TGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCG 53486
| | ||| | | | ||| | ||| | | || | || || || || ||
Sbjct 863332 TCTTCACATTCAC-AACATTCGTTCCACTGGTTCGTATATTGCCGGTACTAATGGTACAT 863274
Query 53487 CCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGG 53546
|| | || || | || ||| | || || ||||||| || || | || || | || |
Sbjct 863273 CCAACGGTATAATTCCGATGGTTCGTGTGTTCAACAGTACTGCTAGATATGTGGATCAAG 863214
Query 53547 GTGGTGGGAAGCG-CAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATT 53605
||||| ||| | | ||| | | || || || ||| | ||||| ||||| || || ||
Sbjct 863213 GTGGTAACAAGAGACCAGGTGCCATT-GCTATTTACTTGGAGCCTTGGCATGCTGATATC 863155
Query 53606 ATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCT 53664
| || ||| |||| | | |||||| ||| | || ||||| || ||| ||||| |
Sbjct 863154 TTCGACTTTATCGATATCAGAAAGAATCATGGTAAAGAGGAGATTCG-TGCACGTGATTT 863096
Query 53665 GTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTG 53724
|||| ||||||| |||||||| || | || ||| | ||||||| |||| ||||
Sbjct 863095 GTTTCCAGCTCTTTGGATTCCAGATTTATTTATGAAGCGTGTGGAGAGCAACGACAAGTG 863036
Query 53725 G 53725
|
Sbjct 863035 G 863035
Score = 113 bits (124), Expect = 5e-20
Identities = 137/187 (73%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 55728 TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTG 55787
||||| || | ||| |||| || ||||||||| | |||||| | | || | ||| ||
Sbjct 862043 TCAAGAAGTTGTACAGGACAGTTTGGGAGATTTCTCAGAAGTCTGTCATCGTTATGGCTG 861984
Query 55788 CTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTT 55847
||||| | || || |||||| |||||| || ||| |||||||| || || ||
Sbjct 861983 CTGATAGGGGCGCATACATCTGCCAGTCTCAATCTATGAACATCCATTTGCAGTCACCAA 861924
Query 55848 CACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTA 55907
| ||| || |||| || ||||||||||| || ||||||||||| | ||||| ||||
Sbjct 861923 CTATGGGTAAATTGACTTCCATGCACTTTTATGGCTGGAAGAAGGGCTTGAAGACAGGTA 861864
Query 55908 TGTACTA 55914
|||||||
Sbjct 861863 TGTACTA 861857
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547215794794000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |