Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001005505.1_202015-05-
08] 30 sequences; 12,880,761 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq25 127 1e-24
seq12 109 3e-19
>seq25
Length=1112461
Score = 127 bits (140), Expect = 1e-24
Identities = 158/214 (74%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557
|||||||| ||||| ||| |||||||| || ||||| |||||||||| |||||||
Sbjct 696389 ACCAAATGAAGAGTAGACTCTTTTTGAATATTGTAATCAGAAAGTGTTCTTCCGTCTTCC 696448
Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617
| ||| |||||||||||||| || | ||| ||||| || || | ||| ||||| |||
Sbjct 696449 AATTGCTTACCGGCAAATATCAACCTCTGCTGGTCTGGTGGAATTCCTTCCTTATCTTGA 696508
Query 34618 ATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676
|||||||| ||||| || || ||||| || || || | || || || ||
Sbjct 696509 ATCTTTTG-CTTAACATTATCGATAGTGTCAGAAGATTCAACCTCTAACGTGATTGTCTT 696567
Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710
|| ||||| || ||||||||||| |||||| ||
Sbjct 696568 TCCAGTTAATGTCTTCACAAAAATTTGCATGATG 696601
Score = 120 bits (132), Expect = 2e-22
Identities = 154/210 (73%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557
|||||||| ||||| ||| |||||||| || ||||| |||||||||| |||||||
Sbjct 695933 ACCAAATGAAGAGTAGACTCTTTTTGAATATTGTAATCAGAAAGTGTTCTTCCGTCTTCC 695992
Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617
| ||| |||||||||||||| || | ||| ||||| || || | ||| ||||| |||
Sbjct 695993 AATTGCTTACCGGCAAATATCAACCTCTGCTGGTCTGGTGGAATTCCTTCCTTATCTTGA 696052
Query 34618 ATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676
|||||||| ||||| || || ||||| || || || | || || || ||
Sbjct 696053 ATCTTTTG-CTTAACATTATCGATAGTGTCAGAAGATTCAACCTCTAGCGTGATTGTCTT 696111
Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| || |||||||| ||||| || |||||
Sbjct 696112 TCCCGTCAACGTTTTAACAAAGATTTGCAT 696141
Score = 120 bits (132), Expect = 2e-22
Identities = 154/210 (73%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557
|||||||| ||||| ||| |||||||| || ||||| |||||||||| |||||||
Sbjct 696161 ACCAAATGAAGAGTAGACTCTTTTTGAATATTGTAATCAGAAAGTGTTCTTCCGTCTTCC 696220
Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617
| ||| |||||||||||||| || | ||| ||||| || || | ||| ||||| |||
Sbjct 696221 AATTGCTTACCGGCAAATATCAACCTCTGCTGGTCTGGTGGAATTCCTTCCTTATCTTGA 696280
Query 34618 ATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676
|||||||| ||||| || || ||||| || || || | || || || ||
Sbjct 696281 ATCTTTTG-CTTAACATTATCGATAGTGTCAGAAGATTCAACCTCTAGCGTGATTGTCTT 696339
Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| || |||||||| ||||| || |||||
Sbjct 696340 TCCCGTCAACGTTTTAACAAAGATTTGCAT 696369
Score = 114 bits (126), Expect = 8e-21
Identities = 153/210 (73%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557
||||| || ||||| ||| |||||||| || ||||| |||||||||| |||||||
Sbjct 695705 ACCAAGTGAAGAGTTGACTCTTTTTGAATATTGTAATCAGAAAGTGTTCTTCCGTCTTCC 695764
Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617
| ||| |||||||||||||| || | ||| ||||| || || | ||| ||||| |||
Sbjct 695765 AATTGCTTACCGGCAAATATCAACCTCTGCTGGTCTGGTGGAATTCCTTCCTTATCTTGA 695824
Query 34618 ATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676
|||||||| ||||| || || ||||| || || || | || || || ||
Sbjct 695825 ATCTTTTG-CTTAACATTATCGATAGTGTCAGAAGATTCAACCTCTAGCGTGATTGTCTT 695883
Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| || |||||||| ||||| || |||||
Sbjct 695884 TCCCGTCAACGTTTTAACAAAGATTTGCAT 695913
>seq12
Length=1432871
Score = 109 bits (120), Expect = 3e-19
Identities = 164/233 (70%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | | ||| ||||| || ||||| |||||| || ||||| || || ||
Sbjct 1192723 CCACCTCTCAATCTCAAGACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCCGAC 1192782
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| |||| | || || | || ||||| ||||| || || | ||| || || || ||
Sbjct 1192783 AAAGTTCTGCCATCCTCCAACTGCTTACCAGCAAAGATCAATCTCTGCTGATCTGGTGGG 1192842
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACT 34659
| ||||||||||||| ||||||||| || | ||| ||||| ||||||
Sbjct 1192843 ATTCCCTCCTTGTCTTGGATCTTTTGCTTGACATTGTCAATGGTGTCGGAAGACTCCACC 1192902
Query 34660 TCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGAT 34712
|||| ||| || || |||||||| || || || || ||||| ||||| |||||
Sbjct 1192903 TCCAAGGTGATAGTCTTACCGGTCAAAGTCTTAACGAAAATTTGCATTTTGAT 1192955
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314729484926990
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |