Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001005505.1_202015-05-
08] 30 sequences; 12,880,761 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq23 179 3e-40
>seq23
Length=1356690
Score = 179 bits (198), Expect = 3e-40
Identities = 581/894 (65%), Gaps = 25/894 (3%)
Strand=Plus/Minus
Query 4257 TTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTT 4316
|| ||||| ||||| |||| ||| || ||||||||||| || || | || || ||||||
Sbjct 991523 TTCTGGTAGTCGGAAACTCTCTTCTCAAAGAAATTAGTCTTACCAGCCAAGGAGATATTT 991464
Query 4317 TCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGAGCTACAAGC 4376
||||| || || || ||||| || |||||||| || || || | || | ||||
Sbjct 991463 TCCATGAAGTCGAATGGATTTGTGACGTTGTAAACCTTCTCGCATCCCAATGCGATAAGC 991404
Query 4377 AATCGGTCAGCTACA-AATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAA 4435
|| | ||| || ||| || || | ||||| ||| | ||| |||| || || | |||
Sbjct 991403 AACCTGTCGGC-ACAGAACTCAACGTACTGAGCCATCATATCGAAGTTCATACCGAGTAA 991345
Query 4436 TCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTAT 4495
|| || || |||| | || | || || || ||| | || || || || || ||
Sbjct 991344 AGAAACTGGAAGAGCGTCTCTCCAGAAAGTTTTCTCAATATTAACAGCCTCGGTCATGAT 991285
Query 4496 ATCTTTT-ATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAA 4554
||| || || | | ||| |||| || |||| ||||| | || ||||
Sbjct 991284 -TCTCTTGATAATGACCTTACTTGGTGGATGCTTCAAGTGAGAGAACAAAAGGCATGCAA 991226
Query 4555 AATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCA 4614
|||| ||| | ||| || ||||||| || || |||||||| ||||| | || ||||
Sbjct 991225 AATCGGTATGTAGACCCTCATCTCTGCAGATAAGCTCGTTAGAGAACGTAAGGCCTGGCA 991166
Query 4615 TTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTT 4674
| ||||||||||| || | ||| || || | |||||| || ||||| || || | ||||
Sbjct 991165 TCAAACCTCTCTTCTTCAACCAGAAGATGGAGGCAAACGATCCAGAGAAAAACACACCTT 991106
Query 4675 CTACGGCGGCAAACGCTACTAA----TCGGGACCCGAACGAGCTGGCTTTGTCTTTAATC 4730
| | ||| ||||| || || || || | | | || | | | ||| || |||
Sbjct 991105 CAATGGCAGCAAAAGCAACCAATCTCTCAGCATACAAAGCATC-ATCATTG---TTTATC 991050
Query 4731 CATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAAT 4790
||| | || ||||| ||| || | ||||| |||||||| | || || || ||
Sbjct 991049 CATCTCAAAGCCCATAAAGCCTTCTCCTTAATAGGTGGAATTGTATGGATGGCATTGAAC 990990
Query 4791 AATT-----TACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACA 4845
|| | ||| ||| ||| ||||| || || || | ||| |||
Sbjct 990989 AAGTAGTCGGACTCTTT-----CTTGTCAGTGATATAGGTCTCGATCAAAAGGGAATAAG 990935
Query 4846 TTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTA 4905
| ||||| || || || || | |||||| || || || ||| ||| || || | ||
Sbjct 990934 TCTCAGAGTGGATGTTCTCAACCATAATCTGGAAACCATAGAAGGCTCTTGCCTCAGGTA 990875
Query 4906 CTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTG 4965
|| || | || ||| | | | | || || || | || ||||| || || |
Sbjct 990874 ACTGCACCTGCTTCATAAAGTTCTGTGCCAAATTCTCATCGACAATACCATCTGAAGCGG 990815
Query 4966 CAAAAAACGCCAAAACATGAGATATAAAGTA---CTGTTCGTCAGGCTTAAGTTTTTTCC 5022
|||| || ||||| ||| |||| || ||||| || | | || | | | ||||
Sbjct 990814 CAAAGAAGGCCAAGACACGAGAGATGAAGTATCTCTCATTGGCATTCATCTTGTCATTCC 990755
Query 5023 AGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTT 5082
||| || |||||| || | | ||| | || || ||||||| || || || || || |
Sbjct 990754 AGTCGGTCAAATCCTTTGAGAGATCGATCTCCTCGGCAGTCCAGAAAGAGGCCTCGGCCT 990695
Query 5083 TTTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAATCTGT 5136
| |||||||| ||| |||||| |||||||| || | || || |||||||
Sbjct 990694 TCTTGTACATTTGCCATATATCATCGTACTGAATAGGGAACATCACGAATCTGT 990641
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427049443859990
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |