Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001005505.1_202015-05-
08] 30 sequences; 12,880,761 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq12 217 2e-51
seq23 190 3e-43
>seq12
Length=1432871
Score = 217 bits (240), Expect = 2e-51
Identities = 585/886 (66%), Gaps = 14/886 (2%)
Strand=Plus/Plus
Query 78003 ACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGT 78062
|| || |||||||| | ||| || ||||| ||||| ||| | ||| || | | |
Sbjct 863054 ACACGCTTCATAAATAAATCTGGAATCCAAAGAGCTGGAAACAAATCACGTGCACGAATC 863113
Query 78063 TCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 78122
|| || || || ||||||| | | ||||| ||| || | ||||||| |||||| ||
Sbjct 863114 TCCTCTTTACCATGATTCTTTCTGATATCGATAAAGTCGAAGATATCAGCATGCCAAGGC 863173
Query 78123 TCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCG 78182
|| | || || || || | || |||| || ||||| || ||||| | |||||| ||
Sbjct 863174 TCCAAGTAAATAGCAATGGCACCTGGTCTCTTGTTACCACCTTGATCCACATATCTAGCA 863233
Query 78183 GTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAA 78242
|| | || | || | | ||| ||||| |||||||| ||||| ||||| || || | |
Sbjct 863234 GTACTGTTGAACACACGAACCATCGGAATTATACCGTTGGATGTACCATTAGTACCGGCA 863293
Query 78243 ATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTA 78302
||||| ||| | | ||||| || |||| | || || || || || |||||
Sbjct 863294 ATATACGAACCAGTGGAACGAATGTTGTGAATGTGAAGACCAATACCACCAGCAGTCTTA 863353
Query 78303 GATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATG 78362
|| || | ||| || ||||||| |||||||||||||| || ||| |||||| ||||
Sbjct 863354 GAAATCAAAGCACACTGTTTCAAAGTATCGTAGATACCTTCAATAGAGTCATCTTTCATT 863413
Query 78363 TTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGA 78422
|| | || || ||||| ||| | | ||| || ||||| || || || ||
Sbjct 863414 GCAACTAAGAAGCATGATGACATCTGAGGGCGTGGAGTACCAGCATTGAACAACGTTGGT 863473
Query 78423 GATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATG-TTTCAATAGCT---GATTC 78478
|||||||| || || || | | || | | | |||| || ||| | || || |
Sbjct 863474 GATGCATGTGTGAAGTATCTCTTTGACATCAAGTCATATGATTCCAACACCTTAGGAATA 863533
Query 78479 T-ATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAA 78537
| || || |||||| || || || || | ||| | | || || |||||||||
Sbjct 863534 TCATCACC-----ATGAATACCGACGGCCACTCTCATAAGAAGGTGTTGTGGTCTTTCAG 863588
Query 78538 CCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGT 78597
| |||| ||| ||| |||||| || || ||||||||| || |||||||| ||||
Sbjct 863589 CAACCTTACCATTAATTCTCAACAGATAAGAACGTTCCAAAGTCTTGAAACCAAAGTAGT 863648
Query 78598 TGTATGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGTAA 78657
|||| ||||| | |||||| |||| | || || | | ||| || | | |||
Sbjct 863649 TGTAACTGAAGTCACGGTCGTAATTAATGGCTGAGTTCAACTCATCCTTATGCTCCATAA 863708
Query 78658 CAATATCCATGACAGTAGTTGAAATAATAGGAGA-TCGTACACCATTTTTAGGATTAACA 78716
|||| | || | ||||| |||||||| | | | | ||| |||||
Sbjct 863709 CAATCTTATAAACCTCATCAGAAATCATAGGAGACTTCTTCTGGGTCTTT-GGATTGTAG 863767
Query 78717 TAGTTAAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTA 78776
||||| ||| ||| || || |||||| || | || || || | |||||| | |||
Sbjct 863768 TAGTTGTATAGATCCTCTATAACATCAGAGAAAGGCTTCTTAGTCTGCTTGTGCAAATTT 863827
Query 78777 GATACAGCTATTCTTGCAGCTAGAATAGCATAATCAGGATGTTGTGTAGTACAAGT-GGC 78835
|| | || | ||| || || | | ||||||| || ||||| ||| || || || ||
Sbjct 863828 GAGATTGCAAGTCTAGCGGCCAAAGTAGCATAGTCTGGATGCATTGTGGT-CATGTATGC 863886
Query 78836 TGCTATTTCTGCCGCTAAAATATCTAACTCTATAGTTGTGACCCCA 78881
||| |||| || | ||| | || ||||| || || || || |||
Sbjct 863887 TGCAGTTTCAGCAGTCAAATTGTCCAACTCAATGGTGGTAACACCA 863932
Score = 174 bits (192), Expect = 2e-38
Identities = 522/791 (66%), Gaps = 15/791 (2%)
Strand=Plus/Plus
Query 76811 TGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCT 76870
|||||||| ||||||||||| || || | ||| |||| || || || ||||||
Sbjct 861847 TGTACGTAAGTAGTACATACCTGTCTTCAAGCCCTTCTTCCAGCCATAAAAGTGCATGGA 861906
Query 76871 TGTCAGTTTGGA-ATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGA 76929
|||| ||| ||| | | | || | ||| || ||||| || ||| || ||
Sbjct 861907 AGTCAATTTACCCATAGTTGGTGACTGCAA-ATGGATGTTCATAGATTGAGACTGGCAGA 861965
Query 76930 TGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAG 76989
|| | || || |||||||| ||||| || | | ||| |||| ||| ||||||| |
Sbjct 861966 TGTATGCGCCCCTATCAGCAGCCATAACGATGACAGACTTCTGAGAAATCTCCCAAACTG 862025
Query 76990 TTTTGAA-AACTTGTTTGATATCATCTGGAAGGTTTGTA---TTTTGAATGGAACCACCA 77045
| || | ||||| || ||| | ||| |||| ||||| || ||||| |||||
Sbjct 862026 TCCTGTACAACTTCTT-GATCTTATCGGGAACGTTTGGCAAGTTCTGAATAGAACCGTTG 862084
Query 77046 TC-TGATATAATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCT 77104
|| ||| || || ||||| || |||| ||||| | | | | || | | | ||||
Sbjct 862085 TCGTGA-ATGATGAAGTTCTTCATTGCATCGTTCCATATTCCCATGTCAATAAGATCTCT 862143
Query 77105 AAGGAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATT 77164
| | | ||||||||| || || ||||| |||| | ||||| | || || ||
Sbjct 862144 CAACATGTAAGGATTAACGATCTGGAATTCACCAGCAAGAACTCTTCTCTGATAGATGTT 862203
Query 77165 ACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGG 77224
| ||| ||||||| | | |||| || | |||| ||| || | |||||||||||| ||
Sbjct 862204 AGAGGTGAATGGTTCGAAACATTCGTTATAACCCATAATCTGGGAAGTAGAAGCAGTCGG 862263
Query 77225 CATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTT-CTGATTTTATCTTTTAGAT 77283
||||||||||||||| | | ||||| |||||| || || || ||| | || |||
Sbjct 862264 CATAGGTGCCACCAAAAGAGAGTTTCTAAGACCA-GTCTTGGCAATCTTAGCCTTCAGAG 862322
Query 77284 ATTTCCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGT 77343
| ||| ||||| ||||| | ||| | ||| | ||| ||||||||||| || |
Sbjct 862323 TATCCCAGTCCCACAGATCCGTAGGCTTTTTGTTCCACATATCATATTGTAGAATACCCT 862382
Query 77344 TACTAGCATATGATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAAC 77403
| ||| || || | |||||| | ||||| || ||| |||| || |
Sbjct 862383 TTGAAGCTGGAGAGCCTTCATATGTCTGATAAGTACCCTCTTCCACAGCAAGCTGGTTGG 862442
Query 77404 TCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTT 77463
| |||||||| ||| ||| | || || || |||| | || || || |||| |
Sbjct 862443 ATTCCTCCAATGCAGCGTGATACAAGGTCTCAAATATCTGAATGTTAAGCTCCCGTGCAT 862502
Query 77464 CAATACTATCAAACGGATAATGTAA--AAGAATAAAGGCATCTGCTAATCCCTGAACTCC 77521
| || ||||| || || | ||| | ||| |||| ||| || | ||||| | ||
Sbjct 862503 CTGGACAGTCAAAAGG-TAGTCTAAGCATGAA-GAAGGTATCAGCAAGACCCTGGATACC 862560
Query 77522 AATACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATT 77581
|| | |||||||||| | |||| | ||||| | || || |||| ||||| |||||
Sbjct 862561 AAGAGCAATAGGTCTGTTTCTCATGTTGGAGTTACGGGCCTCAGGAACTGGATAGTAATT 862620
Query 77582 AATGTCTATAA 77592
|||| ||||
Sbjct 862621 TCTGTCAATAA 862631
>seq23
Length=1356690
Score = 190 bits (210), Expect = 3e-43
Identities = 568/866 (66%), Gaps = 18/866 (2%)
Strand=Plus/Minus
Query 47871 TTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCCATAAAATCAAATGGATTA 47930
||||| || |||||||| || || |||| || ||||||||||| || || ||||||||
Sbjct 991502 TTCTCAAAGAAATTAGTCTTACCAGCCAAGGAGATATTTTCCATGAAGTCGAATGGATTT 991443
Query 47931 ACTGCATTATAAAtttttttAAATCCTAATTCTGAAATCAGTCTATCTGCAACGAATTCT 47990
| || |||| || | |||| ||| | || || || || ||| ||| ||
Sbjct 991442 GTGACGTTGTAAACCTTCTCGCATCCCAATGCGATAAGCAACCTGTCGGCACAGAACTCA 991383
Query 47991 ATATATCTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGTAGAGCCTCCGTA 48050
| || |||||| || | ||||| || | | |||||| ||||| || |
Sbjct 991382 ACGTACTGAGCCATCATATCGAAGTTCATACCGAGTAAAGAAACTGGAAGAGCGTCTCTC 991323
Query 48051 -AGAAACTCTTGTTCGATAGTGACAGCATC---CACTATTATCGATGTTACCGTTTCCTC 48106
||||| | || | | ||| | ||||| || || ||| || || || | |||
Sbjct 991322 CAGAAAGTTTTCT-CAATATTAACAGCCTCGGTCATGATTCTCT-TGATAATGA--CCTT 991267
Query 48107 ACTTGGTGGATACAACAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGACCTTC 48166
||||||||||| | ||| || |||| | ||||||||||| ||| ||||| ||
Sbjct 991266 ACTTGGTGGATGCTTCAAGTGAGAGAACAAAAGGCATGCAAAATCGGTATGTAGACCCTC 991207
Query 48167 ATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAG 48226
|||||| | || | |||||||| || || || || ||||| | || | || || |
Sbjct 991206 ATCTCTGCAGATAAGCTCGTTAGAGAACGTAAGGCCTGGCATCAAACCTCTCTTCTTCAA 991147
Query 48227 CCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGT 48286
||| || || | || || |||||||| || || | ||||| | ||| ||||| ||
Sbjct 991146 CCAGAAGATGGAGGCAAACGATCCAGAGAAAAACACACCTTCAATGGCAGCAAAAGCAAC 991087
Query 48287 AAGTCTCTCTCCGT---AACTGGCTTCGTTGTGTATCCACCGTTGTGCCCAATCAGCCTT 48343
| |||||| | | || | || |||| |||||| | ||||| ||||||
Sbjct 991086 CAATCTCTCAGCATACAAAGCATCATCATTGTTTATCCATCTCAAAGCCCATAAAGCCTT 991027
Query 48344 CTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTGCTATC 48403
|| ||| | | || ||||| | || ||||| || | ||| || || | ||
Sbjct 991026 CTCCTTAATAGGTGGAATTGTATGGATGGCATTGAACAAGTAGTCGGACTCTTTCTTGTC 990967
Query 48404 TTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCAT 48463
| | || || || || ||||| ||| | || ||||| || || |||| ||
Sbjct 990966 AGTGATATAGGTCTCGATCAAAAGGGAATAAGTCTCAGAGTGGATGTTCTCAACCATAAT 990907
Query 48464 CTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTC--A 48521
||| || || || || ||| || || | | ||| |||| | | || || ||||
Sbjct 990906 CTGGAAACCATAGAAGGCTCTTGCCTCAGGTAACTGCACCTGC-TTCATAA-AGTTCTGT 990849
Query 48522 GCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATA 48581
||||||||||||| || || ||||| ||| ||||| || || || ||| | ||
Sbjct 990848 GCCAAATTCTCATCGACAATACCATCTGAAGCGGCAAAGAAGGCCAAGACACGAGAGATG 990789
Query 48582 AAATATTTTTCGTTGGAAGTCAGTTT---ATTCCAGTCATTGATATCTTTTGATATATCT 48638
|| ||| | || |||| | ||| || ||||||||| | | ||| ||||| | |||
Sbjct 990788 AAGTATCTCTCATTGGCATTCATCTTGTCATTCCAGTCGGTCAAATCCTTTGAGAGATCG 990729
Query 48639 ACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATATATCACTG 48698
| || || || ||||| || || ||||| || || || ||||| | |||||||||| |
Sbjct 990728 ATCTCCTCGGCAGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATTTGCCATATATCATCG 990669
Query 48699 TATTGGATTGGGAAAATAACAAATCT 48724
|| || || ||||| || || |||||
Sbjct 990668 TACTGAATAGGGAACATCACGAATCT 990643
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694668539499200
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