Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001005505.1_202015-05-
08] 30 sequences; 12,880,761 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq25 141 2e-28
seq12 141 2e-28
seq1 138 2e-27
>seq25
Length=1112461
Score = 141 bits (156), Expect = 2e-28
Identities = 159/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 316990 TCATGCTCAACATATGCAGTTTTCAGAATATCCTTCGTCGGGAACCCTTCCAACTGACCG 317049
|||||||||||||| ||||| | || | |||| | ||||| ||||| | ||| |||
Sbjct 744273 TCATGCTCAACATACACAGTTCTAAGGACGTCCTGAGATGGGAAACCTTCAACCTGGCCG 744214
Query 317050 TTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCATTGGGGCCGCAAAGACCATAC 317109
|| | || ||| ||| || || ||||| |||||||| || |||||||||||||| ||
Sbjct 744213 TTAGCCATTGCCTTCAGAAGGGTAGACTTACCAGCACCGTTAGGGCCGCAAAGACCGTAT 744154
Query 317110 CGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTCAGAAGAATCTTACCACCATATGCC 317169
| |||| |||||| | | | | ||||||| |||||||||| |||| || |||
Sbjct 744153 CTTCTTCCTCTCTTCAAACGCAGCTGAGATTTGTTCAAAAGAATCTTAGCACCGTAAGCC 744094
Query 317170 AGAGAGAACTCACAATCACACAGGTCCTCGCCG 317202
| |||||||||||| | ||| || ||||| |||
Sbjct 744093 AAAGAGAACTCACAGTTACAAAGATCCTCACCG 744061
Score = 140 bits (154), Expect = 7e-28
Identities = 146/192 (76%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968
|||||||| || ||||| |||| ||| || | || || || | ||| || ||||||||
Sbjct 695723 TCTTTTTGAATATTGTAATCAGAAAGTGTTCTTCCGTCTTCCAATTGCTTACCGGCAAAT 695782
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028
||||| | || ||||| ||||| || ||||| ||||| |||||| || || ||
Sbjct 695783 ATCAACCTCTGCTGGTCTGGTGGAATTCCTTCCTTATCTTGAATCTTTTGCTTAACATTA 695842
Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088
||||||||||| |||| ||| || || || ||||| ||||| |||||||| || |||||
Sbjct 695843 TCGATAGTGTCAGAAGATTCAACCTCTAGCGTGATTGTCTTTCCCGTCAACGTTTTAACA 695902
Query 283089 AATATCTGCATT 283100
|| || ||||||
Sbjct 695903 AAGATTTGCATT 695914
Score = 140 bits (154), Expect = 7e-28
Identities = 146/192 (76%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968
|||||||| || ||||| |||| ||| || | || || || | ||| || ||||||||
Sbjct 695951 TCTTTTTGAATATTGTAATCAGAAAGTGTTCTTCCGTCTTCCAATTGCTTACCGGCAAAT 696010
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028
||||| | || ||||| ||||| || ||||| ||||| |||||| || || ||
Sbjct 696011 ATCAACCTCTGCTGGTCTGGTGGAATTCCTTCCTTATCTTGAATCTTTTGCTTAACATTA 696070
Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088
||||||||||| |||| ||| || || || ||||| ||||| |||||||| || |||||
Sbjct 696071 TCGATAGTGTCAGAAGATTCAACCTCTAGCGTGATTGTCTTTCCCGTCAACGTTTTAACA 696130
Query 283089 AATATCTGCATT 283100
|| || ||||||
Sbjct 696131 AAGATTTGCATT 696142
Score = 140 bits (154), Expect = 7e-28
Identities = 146/192 (76%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968
|||||||| || ||||| |||| ||| || | || || || | ||| || ||||||||
Sbjct 696179 TCTTTTTGAATATTGTAATCAGAAAGTGTTCTTCCGTCTTCCAATTGCTTACCGGCAAAT 696238
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028
||||| | || ||||| ||||| || ||||| ||||| |||||| || || ||
Sbjct 696239 ATCAACCTCTGCTGGTCTGGTGGAATTCCTTCCTTATCTTGAATCTTTTGCTTAACATTA 696298
Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088
||||||||||| |||| ||| || || || ||||| ||||| |||||||| || |||||
Sbjct 696299 TCGATAGTGTCAGAAGATTCAACCTCTAGCGTGATTGTCTTTCCCGTCAACGTTTTAACA 696358
Query 283089 AATATCTGCATT 283100
|| || ||||||
Sbjct 696359 AAGATTTGCATT 696370
Score = 123 bits (136), Expect = 5e-23
Identities = 142/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968
|||||||| || ||||| |||| ||| || | || || || | ||| || ||||||||
Sbjct 696407 TCTTTTTGAATATTGTAATCAGAAAGTGTTCTTCCGTCTTCCAATTGCTTACCGGCAAAT 696466
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028
||||| | || ||||| ||||| || ||||| ||||| |||||| || || ||
Sbjct 696467 ATCAACCTCTGCTGGTCTGGTGGAATTCCTTCCTTATCTTGAATCTTTTGCTTAACATTA 696526
Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088
||||||||||| |||| ||| || || | ||||| ||||| || || || ||||| ||
Sbjct 696527 TCGATAGTGTCAGAAGATTCAACCTCTAACGTGATTGTCTTTCCAGTTAATGTCTTCACA 696586
Query 283089 AATATCTGCAT 283099
|| || |||||
Sbjct 696587 AAAATTTGCAT 696597
>seq12
Length=1432871
Score = 141 bits (156), Expect = 2e-28
Identities = 150/198 (76%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968
|| || |||||||||||||| | | || | ||||||||| | || || || ||||||
Sbjct 1192759 TCCTTCTGGATGTTGTAGTCCGACAAAGTTCTGCCATCCTCCAACTGCTTACCAGCAAAG 1192818
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028
||||| | || || || || || ||||||||||||||||||||| || || |
Sbjct 1192819 ATCAATCTCTGCTGATCTGGTGGGATTCCCTCCTTGTCTTGGATCTTTTGCTTGACATTG 1192878
Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088
|| || ||||| |||| || || || | ||||| |||||||| |||||||||||||||
Sbjct 1192879 TCAATGGTGTCGGAAGACTCCACCTCCAAGGTGATAGTCTTACCGGTCAAAGTCTTAACG 1192938
Query 283089 AATATCTGCATTTTCATA 283106
|| || |||||||| |||
Sbjct 1192939 AAAATTTGCATTTTGATA 1192956
>seq1
Length=1856900
Score = 138 bits (152), Expect = 2e-27
Identities = 151/201 (75%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| || || ||||||||||||| | || | |||||||| | || || || |||||
Sbjct 768226 TTCCTTCTGAATGTTGTAGTCAGACAAAGTTCTACCATCCTCCAACTGCTTACCAGCAAA 768167
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
|||||| | ||||| ||| ||||| |||||||| || ||||||||| || || |
Sbjct 768166 GATCAATCTCTGTTGATCAGGTGGAATTCCCTCCTTATCCTGGATCTTTTGCTTGACATT 768107
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| || || || |||| || || || | ||||| |||||||||||||| ||||||||
Sbjct 768106 GTCAATGGTATCGGAAGACTCCACCTCCAAGGTGATAGTCTTACCCGTCAAGGTCTTAAC 768047
Query 283088 GAATATCTGCATTTTCATATA 283108
||| || |||||||| ||||
Sbjct 768046 GAAAATTTGCATTTTTCTATA 768026
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046738797659620
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |