Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001005505.1_202015-05-
08] 30 sequences; 12,880,761 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq23 125 7e-24
>seq23
Length=1356690
Score = 125 bits (138), Expect = 7e-24
Identities = 578/901 (64%), Gaps = 17/901 (2%)
Strand=Plus/Minus
Query 23205 CATAACACCCATTTTTTGATATTCCCCAACACGTCTT-TCGAAAAAATTTGTCTTACCCT 23263
||||||||| || || || || ||| | |||| || || ||||| ||||||||
Sbjct 991536 CATAACACCGGCCTTCTGGTAGTCGGAAACTC-TCTTCTCAAAGAAATTAGTCTTACCAG 991478
Query 23264 CTAATGATATATTTTCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATG 23323
| || || ||||||||||| || || |||||||| | || || || | |||
Sbjct 991477 CCAAGGAGATATTTTCCATGAAGTCGAATGGATTTGTGACGTTGTAAACCTTCTCGCATC 991418
Query 23324 ATAATTCCTTTAAAAGCCTATCTGCTACA-AATTCAATATATTGACACATCAAATCATAG 23382
||| | | | | ||| || || ||| || |||| || ||| ||||| ||| ||
Sbjct 991417 CCAATGCGATAAGCAACCTGTCGGC-ACAGAACTCAACGTACTGAGCCATCATATCGAAG 991359
Query 23383 TTTATACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTT-TCAATGGAAAC 23441
|| ||||| | || ||||||| || || |||| |||||| ||||| |||
Sbjct 991358 TTCATACCGAGTAAAGAAACTGGAAGAGCGTCTCTCCAGAA-AGTTTTCTCAATATTAAC 991300
Query 23442 AGCATCTTTAATTATT---TGAACAATAACTTCTTCACTAGGTGGATATTTTAAATACTT 23498
||| || | || ||| | | ||| || ||| ||| ||||||| || || |
Sbjct 991299 AGCCTCGGTCATGATTCTCTTGATAATGAC--CTT-ACTTGGTGGATGCTTCAAGTGAGA 991243
Query 23499 AAACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGA 23558
||||| | ||||||||||| |||||| || ||||| || | || | || |||||
Sbjct 991242 GAACAAAAGGCATGCAAAATCGGTATGTAGACCCTCATCTCTGCAGATAAGCTCGTTAGA 991183
Query 23559 AAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCC 23618
|| || | |||||||| || |||| || || | ||| || || | ||||| |||||
Sbjct 991182 GAACGTAAGGCCTGGCATCAAACCTCTCTTCTTCAACCAGAAGATGGAGGCAAACGATCC 991123
Query 23619 GGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATT 23678
|| || || | ||| |||| || ||||| || || | | | || | ||||
Sbjct 991122 AGAGAAAAACACACCTTCAATGGCAGCAAAAGCAACCAATCTCTCAGCATACAAAGCATC 991063
Query 23679 ATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTC 23738
|| || |||||| | | ||| ||||||| || | | |||||| |
Sbjct 991062 ATCATTGTTTATCCATCTCAAAGCCCATAAAGCCTTCTCCTTAATAGGTGGAATTGTATG 991003
Query 23739 AATTGCTTTTAAGAGAAAAGT-TTTTTCTTCATTATCTGTTATATATGTATCAATTAGTA 23797
|| || || || | | ||| |||| || || || ||||| || || || | |
Sbjct 991002 GATGGCATTGAACA-AGTAGTCGGACTCTTTCTTGTCAGTGATATAGGTCTCGATCAAAA 990944
Query 23798 AACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAG 23857
||| | ||||| || || || |||| |||||| || ||||| || ||| |
Sbjct 990943 GGGAATAAGTCTCAGAGTGGATGTTCTCAACCATAATCTGGAAACCATAGAAGGCTCTTG 990884
Query 23858 CTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCAT 23917
| |||| || || || | || | ||| | | || ||||| || | ||||||||||
Sbjct 990883 CCTCAGGTAACTGCACCTGCTTCATAAAGTTCTGTGCCAAATTCTCATCGACAATACCAT 990824
Query 23918 CACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAG--TTGATAA 23975
| ||| |||||||| || | ||| || || | ||| |||| | || ||
Sbjct 990823 CTGAAGCGGCAAAGAAGGCCAAGACACGAGAGATGAAGTATCTCTCATTGGCATTCATCT 990764
Query 23976 T-TTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTG 24034
| | ||||| || | | ||| ||||| | ||| | || || | ||||| ||| |
Sbjct 990763 TGTCATTCCAGTCGGTCAAATCCTTTGAGAGATCGATCTCCTCGGCAGTCCAGAAAGAGG 990704
Query 24035 CCAAGGCACGCTTATACATTAGCCAAATATCATTATGTTGTATTGGAAATATTACGAATC 24094
|| ||| ||| |||||| |||| ||||||| | || || || || || |||||||
Sbjct 990703 CCTCGGCCTTCTTGTACATTTGCCATATATCATCGTACTGAATAGGGAACATCACGAATC 990644
Query 24095 T 24095
|
Sbjct 990643 T 990643
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521487804442000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |