Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001005505.1_202015-05- 08] 30 sequences; 12,880,761 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq23 125 7e-24 >seq23 Length=1356690 Score = 125 bits (138), Expect = 7e-24 Identities = 578/901 (64%), Gaps = 17/901 (2%) Strand=Plus/Minus Query 23205 CATAACACCCATTTTTTGATATTCCCCAACACGTCTT-TCGAAAAAATTTGTCTTACCCT 23263 ||||||||| || || || || ||| | |||| || || ||||| |||||||| Sbjct 991536 CATAACACCGGCCTTCTGGTAGTCGGAAACTC-TCTTCTCAAAGAAATTAGTCTTACCAG 991478 Query 23264 CTAATGATATATTTTCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATG 23323 | || || ||||||||||| || || |||||||| | || || || | ||| Sbjct 991477 CCAAGGAGATATTTTCCATGAAGTCGAATGGATTTGTGACGTTGTAAACCTTCTCGCATC 991418 Query 23324 ATAATTCCTTTAAAAGCCTATCTGCTACA-AATTCAATATATTGACACATCAAATCATAG 23382 ||| | | | | ||| || || ||| || |||| || ||| ||||| ||| || Sbjct 991417 CCAATGCGATAAGCAACCTGTCGGC-ACAGAACTCAACGTACTGAGCCATCATATCGAAG 991359 Query 23383 TTTATACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTT-TCAATGGAAAC 23441 || ||||| | || ||||||| || || |||| |||||| ||||| ||| Sbjct 991358 TTCATACCGAGTAAAGAAACTGGAAGAGCGTCTCTCCAGAA-AGTTTTCTCAATATTAAC 991300 Query 23442 AGCATCTTTAATTATT---TGAACAATAACTTCTTCACTAGGTGGATATTTTAAATACTT 23498 ||| || | || ||| | | ||| || ||| ||| ||||||| || || | Sbjct 991299 AGCCTCGGTCATGATTCTCTTGATAATGAC--CTT-ACTTGGTGGATGCTTCAAGTGAGA 991243 Query 23499 AAACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGA 23558 ||||| | ||||||||||| |||||| || ||||| || | || | || ||||| Sbjct 991242 GAACAAAAGGCATGCAAAATCGGTATGTAGACCCTCATCTCTGCAGATAAGCTCGTTAGA 991183 Query 23559 AAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCC 23618 || || | |||||||| || |||| || || | ||| || || | ||||| ||||| Sbjct 991182 GAACGTAAGGCCTGGCATCAAACCTCTCTTCTTCAACCAGAAGATGGAGGCAAACGATCC 991123 Query 23619 GGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATT 23678 || || || | ||| |||| || ||||| || || | | | || | |||| Sbjct 991122 AGAGAAAAACACACCTTCAATGGCAGCAAAAGCAACCAATCTCTCAGCATACAAAGCATC 991063 Query 23679 ATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTC 23738 || || |||||| | | ||| ||||||| || | | |||||| | Sbjct 991062 ATCATTGTTTATCCATCTCAAAGCCCATAAAGCCTTCTCCTTAATAGGTGGAATTGTATG 991003 Query 23739 AATTGCTTTTAAGAGAAAAGT-TTTTTCTTCATTATCTGTTATATATGTATCAATTAGTA 23797 || || || || | | ||| |||| || || || ||||| || || || | | Sbjct 991002 GATGGCATTGAACA-AGTAGTCGGACTCTTTCTTGTCAGTGATATAGGTCTCGATCAAAA 990944 Query 23798 AACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAG 23857 ||| | ||||| || || || |||| |||||| || ||||| || ||| | Sbjct 990943 GGGAATAAGTCTCAGAGTGGATGTTCTCAACCATAATCTGGAAACCATAGAAGGCTCTTG 990884 Query 23858 CTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCAT 23917 | |||| || || || | || | ||| | | || ||||| || | |||||||||| Sbjct 990883 CCTCAGGTAACTGCACCTGCTTCATAAAGTTCTGTGCCAAATTCTCATCGACAATACCAT 990824 Query 23918 CACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAG--TTGATAA 23975 | ||| |||||||| || | ||| || || | ||| |||| | || || Sbjct 990823 CTGAAGCGGCAAAGAAGGCCAAGACACGAGAGATGAAGTATCTCTCATTGGCATTCATCT 990764 Query 23976 T-TTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTG 24034 | | ||||| || | | ||| ||||| | ||| | || || | ||||| ||| | Sbjct 990763 TGTCATTCCAGTCGGTCAAATCCTTTGAGAGATCGATCTCCTCGGCAGTCCAGAAAGAGG 990704 Query 24035 CCAAGGCACGCTTATACATTAGCCAAATATCATTATGTTGTATTGGAAATATTACGAATC 24094 || ||| ||| |||||| |||| ||||||| | || || || || || ||||||| Sbjct 990703 CCTCGGCCTTCTTGTACATTTGCCATATATCATCGTACTGAATAGGGAACATCACGAATC 990644 Query 24095 T 24095 | Sbjct 990643 T 990643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521487804442000