Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001005505.1_202015-05- 08] 30 sequences; 12,880,761 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq1 102 8e-17 seq12 89.7 5e-13 >seq1 Length=1856900 Score = 102 bits (112), Expect = 8e-17 Identities = 141/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 41672 TCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 41731 |||||||||||||| ||||| || | || | | || || | |||||| || || || Sbjct 768225 TCCTTCTGAATGTTGTAGTCAGACAAAGTTCTACCATCCTCCAACTGCTTACCAGCAAAG 768166 Query 41732 ATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGAC 41791 |||| | |||||| || | |||| | |||||| ||| ||| |||||||| || Sbjct 768165 ATCAATCTCTGTTGATCAGGTGGAATTCCCTCCTTATCCTGGATCTTTTGCTT-GACATT 768107 Query 41792 GAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 | | | || ||| ||||||||||||| || || || |||||||||| ||||| || Sbjct 768106 GTCAATGGTATCGGAAGACTCCACCTCCAAGGTGATAGTCTTACCCGTCAAGGTCTTAAC 768047 Query 41851 GAAAATCTGCATGTT 41865 |||||| ||||| || Sbjct 768046 GAAAATTTGCATTTT 768032 >seq12 Length=1432871 Score = 89.7 bits (98), Expect = 5e-13 Identities = 139/196 (71%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 ||||||||| ||||| ||||| || | || | | || || | |||||| || || || Sbjct 1192758 CTCCTTCTGGATGTTGTAGTCCGACAAAGTTCTGCCATCCTCCAACTGCTTACCAGCAAA 1192817 Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGA 41790 |||| | ||| || || | || | | ||||||||| ||| |||||||| | | Sbjct 1192818 GATCAATCTCTGCTGATCTGGTGGGATTCCCTCCTTGTCTTGGATCTTTTGCTTGA-CAT 1192876 Query 41791 CGACACAG-TGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTA 41849 | || | ||||| ||||||||||||| || || || ||||| |||| ||||| | Sbjct 1192877 TGTCAATGGTGTCGGAAGACTCCACCTCCAAGGTGATAGTCTTACCGGTCAAAGTCTTAA 1192936 Query 41850 CGAAAATCTGCATGTT 41865 ||||||| ||||| || Sbjct 1192937 CGAAAATTTGCATTTT 1192952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303826636000