Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10-
07] 28 sequences; 12,502,959 total letters
Query= NC_001623.1
Length=133894
Score E
Sequences producing significant alignments: (Bits) Value
seq1 120 3e-22
seq12 100 2e-16
>seq1
Length=1824870
Score = 120 bits (132), Expect = 3e-22
Identities = 165/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 28958 AAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACC 29017
|||||||||||| ||| | || || |||||||| || || || ||| || ||| |
Sbjct 737922 AAAAATGCAAATTTTCGTTAAGACCTTGACGGGTAAGACTATCACCTTGGAGGTGGAGTC 737981
Query 29018 CGCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGA 29077
| || || | | | || | |||||||| || ||||| || || | || ||
Sbjct 737982 TTCCGATACCATTGACAATGTCAAGCAAAAGATCCAGGATAAGGAGGGAATTCCACCTGA 738041
Query 29078 TCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTA 29137
|||||| ||| | |||||||| || || || |||| ||| | |||| || | || ||
Sbjct 738042 TCAACAGAGATTGATCTTTGCTGGTAAGCAGTTGGAGGATGGTAGAACTTTGTCTGACTA 738101
Query 29138 CAATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188
||| |||||||||||||||||||||||| |||| || |||| |||||||
Sbjct 738102 CAACATTCAGAAGGAATCTACTCTTCACTTGGTCTTGAGATTGAGAGGAGG 738152
>seq12
Length=1682134
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018
||||||||||| ||| | || || ||||| || || || || ||| || ||| |
Sbjct 1446028 AAAATGCAAATTTTCGTTAAGACTTTGACCGGTAAGACTATCACCTTGGAGGTGGAGTCT 1445969
Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078
| || || | | | || | |||||||| || || || || || | || ||||
Sbjct 1445968 TCCGACACCATTGACAATGTCAAGCAAAAGATCCAAGACAAGGAGGGAATCCCACCAGAT 1445909
Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTAC 29138
|| || ||| | |||||||| || || || |||| ||| || |||| || | || |||
Sbjct 1445908 CAGCAGAGATTGATCTTTGCTGGTAAGCAGTTGGAGGATGGCAGAACTTTGTCGGACTAC 1445849
Query 29139 AATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188
|| || |||||||| |||||||||||| |||| || |||| |||| ||
Sbjct 1445848 AACATCCAGAAGGAGTCTACTCTTCACTTGGTCTTGAGATTGAGAGGTGG 1445799
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 428335853830340
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |