Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10-
07] 28 sequences; 12,502,959 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq12 109 5e-19
seq1 86.0 5e-12
>seq12
Length=1682134
Score = 109 bits (120), Expect = 5e-19
Identities = 165/235 (70%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 20946 TTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCC 21005
|| || |||| || || | |||| || | ||| |||||||| || ||||| ||||||
Sbjct 1445796 TTACCACCTCTCAATCTCAAGACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCC 1445855
Query 21006 GCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACG 21065
| || ||| | | ||||||| ||| || || ||| | || | ||||||||| ||
Sbjct 1445856 GACAAAGTTCTGCCATCCTCCAACTGCTTACCAGCAAAGATCAATCTCTGCTGATCTGGT 1445915
Query 21066 GGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCC 21125
|| | || |||||||| ||||||||| || || | | | | || || | ||||
Sbjct 1445916 GGGATTCCCTCCTTGTCTTGGATCTTTTGCTTGACATTGTCAATGGTGTCGGAAGACTCC 1445975
Query 21126 GTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTGA 21180
|||| ||| || ||||| ||||| || || || || || |||||||||||||
Sbjct 1445976 ACCTCCAAGGTGATAGTCTTACCGGTCAAAGTCTTAACGAAAATTTGCATTTTGA 1446030
>seq1
Length=1824870
Score = 86.0 bits (94), Expect = 5e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| |||| || || | |||| || | ||| || ||||| |||||||| ||||| | |
Sbjct 738152 CCTCCTCTCAATCTCAAGACCAAGTGAAGAGTAGATTCCTTCTGAATGTTGTAGTCAGAC 738093
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
| ||| | ||||||| ||| || || ||| | || | |||||| || || ||
Sbjct 738092 AAAGTTCTACCATCCTCCAACTGCTTACCAGCAAAGATCAATCTCTGTTGATCAGGTGGA 738033
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| || ||||| || ||||||||| || || | | | | ||||| | ||||
Sbjct 738032 ATTCCCTCCTTATCCTGGATCTTTTGCTTGACATTGTCAATGGTATCGGAAGACTCCACC 737973
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178
|||| ||| || ||||| || || || || || || || |||||||||||
Sbjct 737972 TCCAAGGTGATAGTCTTACCCGTCAAGGTCTTAACGAAAATTTGCATTTT 737923
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422259055904048
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |