Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10-
07] 28 sequences; 12,502,959 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq12 122 7e-23
seq1 120 2e-22
>seq12
Length=1682134
Score = 122 bits (134), Expect = 7e-23
Identities = 168/233 (72%), Gaps = 4/233 (2%)
Strand=Plus/Plus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
|||||||||||||| || |||||||| || || ||||||||| ||||||||||| |
Sbjct 1445799 CCACCTCTCAATCTCAAGACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCCGAC 1445858
Query 45170 --AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227
|||| | | || |||| || || || || || ||||| | ||| || || || |
Sbjct 1445859 AAAGTT--CTGCCATCCTCCAACTGCTTACCAGCAAAGATCAATCTCTGCTGATCTGGTG 1445916
Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287
| | ||||||||||| || |||||||| || | | | |||| | |||||
Sbjct 1445917 GGATTCCCTCCTTGTCTTGGATCTTTTGCTTGACATTGTCAATGGTGTCGGAAGACTCCA 1445976
Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340
|||||| ||| || ||||| || |||| |||||| || || |||||||| |||
Sbjct 1445977 CCTCCAAGGTGATAGTCTTACCGGTCAAAGTCTTAACGAAAATTTGCATTTTG 1446029
>seq1
Length=1824870
Score = 120 bits (132), Expect = 2e-22
Identities = 167/232 (72%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
|| ||||||||||| || |||||||| || || |||||||||||||||||||| |
Sbjct 738152 CCTCCTCTCAATCTCAAGACCAAGTGAAGAGTAGATTCCTTCTGAATGTTGTAGTCAGAC 738093
Query 45170 --AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227
|||| | | | || |||| || || || || || ||||| | |||||| || || |
Sbjct 738092 AAAGTT--CTACCATCCTCCAACTGCTTACCAGCAAAGATCAATCTCTGTTGATCAGGTG 738035
Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287
| | |||||||| ||| || |||||||| || | | | | || | |||||
Sbjct 738034 GAATTCCCTCCTTATCCTGGATCTTTTGCTTGACATTGTCAATGGTATCGGAAGACTCCA 737975
Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTT 45339
|||||| ||| || ||||| ||||||| ||||| || || |||||||| ||
Sbjct 737974 CCTCCAAGGTGATAGTCTTACCCGTCAAGGTCTTAACGAAAATTTGCATTTT 737923
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395075065180588
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |