Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10-
07] 28 sequences; 12,502,959 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq23 181 1e-40
>seq23
Length=1344041
Score = 181 bits (200), Expect = 1e-40
Identities = 586/900 (65%), Gaps = 15/900 (2%)
Strand=Plus/Minus
Query 13927 AACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCAAA 13986
|||||| || |||||||| ||||| ||||| ||| || ||||||||||| || || ||
Sbjct 978479 AACTCTCTTCTCAAAGAAATTAGTCTTACCAGCCAAGGAGATATTTTCCATGAAGTCGAA 978420
Query 13987 TGGATTTGTTGACATAA-ACACTTTATCACAACCTAGTTCTAATAGTAATCTATCCGCAA 14045
||||||||| ||| | | || || || || || | | | | || || || || |||
Sbjct 978419 TGGATTTGT-GACGTTGTAAACCTTCTCGCATCCCAATGCGATAAGCAACCTGTCGGCAC 978361
Query 14046 TGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTA 14105
|||||||| || |||| ||| | ||| | |||||||| | || || ||||
Sbjct 978360 AGAACTCAACGTACTGAGCCATCATATCGAAGTTCATACCGAGTAAAGAAACTGGAAGAG 978301
Query 14106 TATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAATCGTAATAATTT 14165
| | | || ||| || ||| ||||||||| | || || || | |||||
Sbjct 978300 CGTCTCTCCAGAAAGTTTTCTCAATATTAACAGCCTCGGTCATGATTCTCTTGATAATGA 978241
Query 14166 CATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGC 14225
| ||| || |||| || | || || | | || |||||||| ||| || |
Sbjct 978240 CCTTACTTGGTGGATGCTTCAAGTGAGAGAACAAAAGGCATGCAAAATCGGTATGTAGAC 978181
Query 14226 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 14285
|||||||||| | ||||| ||||| || || || | ||||||||||| |||| || |
Sbjct 978180 CCTCATCTCTGCAGATAAGCTCGTTAGAGAACGTAAGGCCTGGCATCAAACCTCTCTTCT 978121
Query 14286 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14345
| ||||| || || | || || ||||| || || || | || |||| |||||||| |
Sbjct 978120 TCAACCAGAAGATGGAGGCAAACGATCCAGAGAAAAACACACCTTCAATGGCAGCAAAAG 978061
Query 14346 CTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAG 14405
| | |||| || || || | || | | || ||||||| | ||||||| ||
Sbjct 978060 CAACCAATCTCTCAGCATACAAAGCATCATCATTGTTTATCCATCTCAAAGCCCATAAAG 978001
Query 14406 AtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATGTTCCTTCTCTTTAG 14465
|| | |||||| ||||| | || ||||| || || | || ||||||
Sbjct 978000 CCTTCTCCTTAATAGGTGGAATTGTATGGATGGCATTGAACAAGTAGTCGGACTCTTTCT 977941
Query 14466 TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTT---CCA 14522
| | || || || || || | | | ||| | |||||||| ||||| | |||
Sbjct 977940 TGTCAGTGATATAGGTCTCGATCAAAAGGGAATAAGTCTCAGAGTGGATGTTCTCAACCA 977881
Query 14523 TAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCT-CTGAGTAAAAT 14581
|| ||||| |||||||| || ||| || || | | || |||| || |||| |
Sbjct 977880 TA---ATCTGGAAACCATAGAAGGCTCTTGCCTCAGGTAACTGCACCTGCTTCATAAAGT 977824
Query 14582 CTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTT 14641
| | |||||||| |||| || |||||||| ||| ||||| || ||||| |
Sbjct 977823 -TCTGTGCCAAATTCTCATCGACAATACCATCTGAAGCGGCAAAGAAGGCCAAGACACGA 977765
Query 14642 TTAATAAAGTATTGCTCTT---CATTGCTGAGTTTTTTCCAATCGGCTAAATCCTTAGAA 14698
|| |||||| ||| | |||| | | ||||| |||| |||||||| ||
Sbjct 977764 GAGATGAAGTATCTCTCATTGGCATTCATCTTGTCATTCCAGTCGGTCAAATCCTTTGAG 977705
Query 14699 AGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTTTTTTATACATTACCCATATT 14758
||||| | || || | ||||| ||| || | || || || |||||| ||||||
Sbjct 977704 AGATCGATCTCCTCGGCAGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATTTGCCATATA 977645
Query 14759 TCTTTATATAATATAGGAAAAACTACAAATCTTGAAGATGTT-TCTTTAAGAATTGGTTC 14817
|| | || ||||| || | || |||| || |||||| || || || | ||| ||
Sbjct 977644 TCATCGTACTGAATAGGGAACATCACGAATC-TGTGGATGTTCTCCTTGAGCAATGGCTC 977586
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482345431179040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |