Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10-
07] 28 sequences; 12,502,959 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq1 111 1e-19
seq12 96.9 3e-15
>seq1
Length=1824870
Score = 111 bits (122), Expect = 1e-19
Identities = 163/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158
||||| | | ||| | |||| |||||| || ||||| || |||||||||||||| | |
Sbjct 738152 CCTCCTCTCAATCTCAAGACCAAGTGAAGAGTAGATTCCTTCTGAATGTTGTAGTCAGAC 738093
Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218
| ||| ||| ||| ||||| || || || ||| |||| | ||| |||||||| ||
Sbjct 738092 AAAGTTCTACCATCCTCCAACTGCTTACCAGCAAAGATCAATCTCTGTTGATCAGGTGGA 738033
Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278
| || |||||||| || | ||||||||| | ||| || || | |||
Sbjct 738032 ATTCCCTCCTTATCCTGGATCTTTTGCTTGACATTGTCAATGGTATCGGAAGACTCCACC 737973
Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTTT 18329
|| | |||||| | || || ||||| || || || |||||||||||||||
Sbjct 737972 TCCAAGGTGATAGTCTTACCCGTCAAGGTCTTAACGAAAATTTGCATTTTT 737922
>seq12
Length=1682134
Score = 96.9 bits (106), Expect = 3e-15
Identities = 168/243 (69%), Gaps = 1/243 (0%)
Strand=Plus/Plus
Query 18086 TTCTTTTTGTTATCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAAT 18145
||||| || ||| || || | | ||| | |||| |||||| || || || || || ||
Sbjct 1445787 TTCTTCTTCTTA-CCACCTCTCAATCTCAAGACCAAGTGAAGAGTAGACTCCTTCTGGAT 1445845
Query 18146 GTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTG 18205
||||||||| | || ||| | | ||| ||||| || || || ||| |||| | ||| ||
Sbjct 1445846 GTTGTAGTCCGACAAAGTTCTGCCATCCTCCAACTGCTTACCAGCAAAGATCAATCTCTG 1445905
Query 18206 TTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTC 18265
||||| || | || ||||| || || | ||||||||| | ||| |||||
Sbjct 1445906 CTGATCTGGTGGGATTCCCTCCTTGTCTTGGATCTTTTGCTTGACATTGTCAATGGTGTC 1445965
Query 18266 ACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
| ||| || | |||||| | || |||||||| || || || |||||||||||
Sbjct 1445966 GGAAGACTCCACCTCCAAGGTGATAGTCTTACCGGTCAAAGTCTTAACGAAAATTTGCAT 1446025
Query 18326 TTT 18328
|||
Sbjct 1446026 TTT 1446028
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379343870548860
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |