Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10-
07] 28 sequences; 12,502,959 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq23 123 5e-23
>seq23
Length=1344041
Score = 123 bits (136), Expect = 5e-23
Identities = 282/416 (68%), Gaps = 9/416 (2%)
Strand=Plus/Plus
Query 35153 GATAGAACTGGAACAGGAACTCTATCCATT-TTTGGACCCC---AAATGAGGTTCT-CTC 35207
|| ||||| ||||||||||| ||| |||| |||| ||| | || | || ||| ||
Sbjct 1151251 GACAGAACAGGAACAGGAACA-TATTCATTATTTGCACCTCCACAACTCAGATTCAACTT 1151309
Query 35208 TTCGAGACGACACTATTCCAGTTCTCACTACCAAGAAAATTTTCTGGAGAGGAGTTGTGG 35267
||| || | | ||||| | | || ||||||| | | | | | ||| | ||
Sbjct 1151310 ATCG-GATGGATCATTTCCACTGTTGACAACCAAGAGAGTCTATTTCAAAGGTATATTGC 1151368
Query 35268 AAGAACTCTCGTGGTTCATCAGGGGCAATACAGACGCCAAAGAATTGGCCAAGAAGAAGA 35327
| ||||| | |||||||||| || | ||| || | |||| | | ||||||||
Sbjct 1151369 ATGAACTTTTGTGGTTCATCTCTGGAAGTACCGATGGTAAAGTTCTTTCTGAGAAGAAGG 1151428
Query 35328 TACACATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATACGATA 35387
| ||||| ||| | | |||||| || | |||| ||| || || |||| | ||||
Sbjct 1151429 TTCACATTTGGGAAGGTAATGGATCAAGAGAATATTTAGATTCTATAGGGCTCACAGATA 1151488
Query 35388 GAGCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAAT 35447
|| || | ||||||||||| ||||||||||||||||| | ||||||||||| ||||
Sbjct 1151489 GACGGGAAGATGATTTGGGACCGATATACGGATTCCAATGGAGACATTTTGGTGCCGAAT 1151548
Query 35448 ATGATACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAA 35507
|| | ||| | | ||||| || || || ||| |||||| | || |||| |
Sbjct 1151549 ATAAGGATTGTGATACGGATTACACAGGCAAAGGTTATGATCAGATTGCACATATCATCC 1151608
Query 35508 AGACCCTGAGAGA-AAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCC 35562
| || ||| ||| |||||| ||||| | |||| ||| | | |||||||| ||
Sbjct 1151609 ACACATTGA-AGACAAATCCTTATGATCGCCGGATAATTCTTTCCGCATGGAACCC 1151663
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989583644986740
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |