Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10-
07] 28 sequences; 12,502,959 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq12 390 1e-103
seq23 185 1e-41
>seq12
Length=1682134
Score = 390 bits (432), Expect = 1e-103
Identities = 1399/2146 (65%), Gaps = 77/2146 (4%)
Strand=Plus/Plus
Query 62046 GTGAATTGAATGG---GAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTT 62102
|||||||| |||| |||||| || || ||||||| |||||||| || |||||
Sbjct 1114853 GTGAATTGGATGGCACGAGCGGCAGCCTGT---GTACGTAAGTAGTACATACCTGTTTTC 1114909
Query 62103 AGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACTCGGATCTGC 62161
| || |||| || ||||| ||||| || | ||| ||| | | ||||
Sbjct 1114910 AAGCCCTTCTTCCAGCCATAAAAGTGCATGGAAGTCAATTTACCCATAGTTGGTGACTGC 1114969
Query 62162 TATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTT 62221
| |||||| |||||||||||| || |||| | || ||||| || |||||||| |
Sbjct 1114970 AA-ATGGATGTTCATAGATTGAGACTGGCAGATGTATGCGCCCCTATCAGCAGCCATATC 1115028
Query 62222 TATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTG 62280
|||| | ||| || | ||| ||||||| || | || |||| ||| || | || |
Sbjct 1115029 GATGACAGACTTCTGAGAAATCTCCCAAACTGTCCTGTACAACTT-CTTGATCTTATCGG 1115087
Query 62281 GAAGGTTTGTA---TTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGATCTCAT 62337
||| ||||| |||||||| || || || || || ||||| || |||
Sbjct 1115088 GAACGTTTGGCAAGTTCTGAATAGAACCGTTGTCGTGAATGATGAAGTTCTTCATTGCAT 1115147
Query 62338 CATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGAATT 62397
| ||||||| | | || | | | |||| | | | || ||||| | |||||||
Sbjct 1115148 CGTTCCATATTCCCATGTCAATAAGATCTCTCAACATGTAAGGATTAACGATCTGGAATT 1115207
Query 62398 CTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTAT 62457
| |||| | ||||| | || || ||| ||| | ||||| | | || ||||
Sbjct 1115208 CACCAGCAAGAACTCTTCTCTGATAGATGTTAGAGGTGAATGGTTCGAAACATTCGTTAT 1115267
Query 62458 TTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAA 62517
|||| ||| || | ||| || ||||||||||||||||||||||| | | |||||||
Sbjct 1115268 AACCCATAATCTGGGAAGTAGAAGCAGTCGGCATAGGTGCCACCAAAAGAGAGTTTCTAA 1115327
Query 62518 GACC-GTATGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCCGACGG---- 62572
|||| || | | || ||| | || ||| ||||| | ||| ||||||| ||
Sbjct 1115328 GACCAGTCTTGGCA-ATCTTAGCCTTCAGAGTATCCCAGTCCCACAGATCCGTAGGCTTT 1115386
Query 62573 ---TACAACANNNNNNNNNNNATATTGTAGAATACCGTTACTGGCGTACGATCCTACATA 62629
| | ||| ||||||||||||||| || || || ||| ||||
Sbjct 1115387 TTGTTCCACATATC-------ATATTGTAGAATACCCTTTGAAGCTGGAGAGCCTTCATA 1115439
Query 62630 TGTATCATATGGTCCTTCCTTCTCAGCTAGTT--TACAACTCGCCTCTAATGCACCGTAA 62687
||| | ||| | || || | | |||| || | | | || ||| |||||| ||| |
Sbjct 1115440 TGTCTGATAAGTACCCTCTTCCACAGCAAGCTGGTTGGATTC--CTCCAATGCAGCGTGA 1115497
Query 62688 TAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGATAA 62747
|| | ||| ||||| |||| | || || || |||| || || | ||||| || ||
Sbjct 1115498 TACAAGGTCTCAAATATCTGAATGTTAAGCTCCCGTGCATCTGGACAGTCAAAAGG-TAG 1115556
Query 62748 TTTAAG-AGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCT 62806
| |||| | | || | || || | || || | ||||| | | |||||||| | |||
Sbjct 1115557 TCTAAGCATGAAGAAGGTATCAGCAAGACCCTGGATACCAAGAGCAATAGGTCTGTTTCT 1115616
Query 62807 CTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAG 62866
| | || ||| | || || |||| ||||| ||||| | || |||| || |
Sbjct 1115617 CATGTTGGAGTTACGGGCCTCAGGAACTGGATAGTAATTTCTGTCAATAACACGGTTTAA 1115676
Query 62867 ATTTCTG---ACAA--TTACT----TTGACCACATCCTTCAGTTTGAGAAAATCAA--AT 62915
|| | | |||| ||| | ||| || | || | |||| | | ||| ||
Sbjct 1115677 GTTACGGGTAACAACTTTAGTAATCTTGTGCAACTTCTCGAAGTTGA-ACCAGCAATGAT 1115735
Query 62916 CGCCCATCT-ATT--ACAAA--CATGTTCAATGCAACAGATG-CCAGATTACACACGGCT 62969
| | ||||| | | ||||| || | ||| ||| | || ||| |||||||| |
Sbjct 1115736 C-CTCATCTGACTCAACAAAGGCAGG--CAAA-CAAATGTTGGCCAAGTTACACACACCA 1115791
Query 62970 ACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTT 63029
||||||| | | | || | | | |||| ||| | || | | ||||| ||
Sbjct 1115792 ACCTCATCTGGAGAGGAGTACTCGACAACCTCACAGCACAAGTTCGAAGATTTGATGGTA 1115851
Query 63030 CCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTA 63089
|| || || | |||||||||||| | ||||| |||||||| || | ||||| || |||
Sbjct 1115852 CCCAAGTTCTTCTGATTACTCTTTCTATTACAAGCATCCTTGTAGATCATGAAAGGTGTA 1115911
Query 63090 CCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA-CGACTCGAGCCTTTATTATAGA 63148
|||||||| |||||| || | |||| | ||| | | || ||||||| | | |
Sbjct 1115912 CCAGTTTCTGTCTGAGCCTCCAAAATCTGGTACCATAACTTCT-GAGCCTTCACTGTTCT 1115970
Query 63149 T-TTGTATCTCCTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAA 63207
| || | ||||| || | ||||| |||| |||||| ||||||||||| || |||
Sbjct 1115971 TCTTCCACGTCCTT-CTTTCTCGTAACGAGTGTACAATTTCTCGAACTCGTCACCGTAAA 1116029
Query 63208 CAT-TGTCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTC 63266
||| || | || | | | || ||| | | ||| | ||||| ||| || |
Sbjct 1116030 CATCTGAGAGACCTGGTGCCT-CAGAAGGAGAGAACAATGTCCACTTGTCGTTGCTCTCC 1116088
Query 63267 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGT 63326
|| || |||||||| | ||| ||||||||||||||| ||| | ||| | || | |
Sbjct 1116089 ACACGCTTCATAAATAAATCTGGAATCCAAAGAGCTGGAAACAAATCACGTGCACGAATC 1116148
Query 63327 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 63386
||||| || || ||||||| | | ||||| || | | ||||||| |||||| ||
Sbjct 1116149 TCCTCTTTACCATGATTCTTTCTGATATCGATAAAGTCGAAGATATCAGCATGCCAAGGC 1116208
Query 63387 TCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCG 63446
|||||||| || || || | || || | ||||| || || ||||| | ||||||||
Sbjct 1116209 TCCAAGTAAATAGCAATGGCACCTGGTCTCTTGTTACCACCTTGATCCACATATCTAGCA 1116268
Query 63447 GTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAG 63506
|| | || | || | | ||| ||||| |||||||| ||| ||||||| |||||||
Sbjct 1116269 GTACTGTTGAACACACGAACCATCGGAATTATACCGTTGGATGTACCATTAGTACCGGCA 1116328
Query 63507 ATATAGCCTCCACTGGCACGAATATTACTAAT-TGATAGACCTATTCCCCCTGCCATTTT 63565
||||| ||| ||| |||||| || ||| ||| ||||| || || || || | ||
Sbjct 1116329 ATATACGAACCAGTGGAACGAATGTTGTGAATGTGA-AGACCAATACCACCAGCAGTCTT 1116387
Query 63566 AGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCAT 63625
||| || || || || |||| || || || ||||| ||||| || ||||| ||||
Sbjct 1116388 AGAAATCAAAGCACACTGTTTCAAAGTATCGTAGATACCTTCAATAGAGTCATCTTTCAT 1116447
Query 63626 GTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGG 63685
|| || || || ||||| || | || | ||| || ||||| || || || ||
Sbjct 1116448 TGCAACTAAGAAGCATGATGACATCTGAGGGCGTGGAGTACCAGCATTGAACAACGTTGG 1116507
Query 63686 AGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACG-TCTCAATAGCTGAGTCTA 63744
|| || || || || || | | || | | | || | | ||| | || || |
Sbjct 1116508 TGATGCATGTGTGAAGTATCTCTTTGACATCAAGTCATATGATTCCAACACCTTAG-GAA 1116566
Query 63745 TATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAA 63804
|||| |||||| || || || || | ||| | | ||| || ||||||||| |||
Sbjct 1116567 TATCATCACCATGAATACCGACGGCCACTCTCATAAGAAGGTGTTGTGGTCTTTCAGCAA 1116626
Query 63805 TTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGT 63864
|| || ||| |||||| || || ||||||||| || |||||||| |||||||
Sbjct 1116627 CCTTACCATTAATTCTCAACAGATAAGAACGTTCCAAAGTCTTGAAACCAAAGTAGTTGT 1116686
Query 63865 ATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTTATATTTGTTAACTA 63924
| ||||| || |||||| |||| | || || | || |||||||| | |||| |
Sbjct 1116687 AACTGAAGTCACGGTCGTAATTAATGGCTGAGTTCAACTCATCCTTATGCTCCATAACAA 1116746
Query 63925 TATCCATGGTAATACT----TGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACA 63980
| | ||| || ||||| || ||||| | ||| | || |||||
Sbjct 1116747 T----CTTATAAACCTCATCAGAAATCATAGGAGACTTCTTCTGGGTCTTTGGATTGTAG 1116802
Query 63981 TAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTT 64040
|||||| ||| |||||| || || ||| || | || || || | |||||| | ||||
Sbjct 1116803 TAGTTGTATAGATCCTCTATAACATCAGAGAAAGGCTTCTTAGTCTGCTTGTGCAAATTT 1116862
Query 64041 GATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGT-GGC 64099
|| || || | ||| ||||| | | | ||||| || ||||| ||| || || || ||
Sbjct 1116863 GAGATTGCAAGTCTAGCGGCCAAAGTAGCATAGTCTGGATGCATTGTGGT-CATGTATGC 1116921
Query 64100 TGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCA 64145
||| |||| || | || | ||||||| || | || || || |||
Sbjct 1116922 TGCAGTTTCAGCAGTCAAATTGTCCAACTCAATGGTGGTAACACCA 1116967
>seq23
Length=1344041
Score = 185 bits (204), Expect = 1e-41
Identities = 568/866 (66%), Gaps = 18/866 (2%)
Strand=Plus/Minus
Query 33312 TTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTG 33371
|| || || |||||||| || || |||| || |||||||||||||| || || |||||
Sbjct 978472 TTCTCAAAGAAATTAGTCTTACCAGCCAAGGAGATATTTTCCATGAAGTCGAATGGATTT 978413
Query 33372 GTAACATTGTAAAtttttttAAATCCCAATTCAGAAATCAATCTATCTGCGACGAATTCT 33431
|| || ||||||| || | |||||||| | || ||| || || || ||| ||
Sbjct 978412 GTGACGTTGTAAACCTTCTCGCATCCCAATGCGATAAGCAACCTGTCGGCACAGAACTCA 978353
Query 33432 ATATATGTTTTCATCATTTCACAATTCATTCCTATGAGTTTAACTGGAAGAGCCACAGTA 33491
| || |||||| || | ||||| || | | |||||||||||| | |
Sbjct 978352 ACGTACTGAGCCATCATATCGAAGTTCATACCGAGTAAAGAAACTGGAAGAGCGTCTCTC 978293
Query 33492 -AGAAATTCTTGTTCAATGGATACCGCATTTGTTATAATAAATCTAACGGTTTCTTCACT 33550
||||| | || | |||| || || | || || || | | | | | |||
Sbjct 978292 CAGAAAGTTTTCT-CAATATTAACAGCCTCGGTCATGATTCTCTTGATAATGACCTTACT 978234
Query 33551 CGGTGGATGTAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTC 33610
|||||||| || || |||| | ||||| |||||| || |||||||| ||
Sbjct 978233 TGGTGGATGCTTCAAGTGAGAGAACAAAAGGCATGCAAAATCGGTATGTAGACCCTCATC 978174
Query 33611 TCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCA 33670
||| | || | |||||||| ||||| || || ||||| | || | ||| || | |||
Sbjct 978173 TCTGCAGATAAGCTCGTTAGAGAACGTAAGGCCTGGCATCAAACCTCTCTTCTTCAACCA 978114
Query 33671 AAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAG 33730
|| ||||| || || ||||| || || || | ||||| | |||||||| |||| |
Sbjct 978113 GAAGATGGAGGCAAACGATCCAGAGAAAAACACACCTTCAATGGCAGCAAAAGCAACCAA 978054
Query 33731 TCTCTCTCCATAACCGGCGCTGTCATG---TATCCACTTTTGAGCCCAATCGGCCTTCTT 33787
|||||| |||| || |||| |||||| | |||||| |||||||
Sbjct 978053 TCTCTCAGCATACAAAGCATCATCATTGTTTATCCATCTCAAAGCCCATAAAGCCTTCTC 977994
Query 33788 TTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTT 33847
|| | | || || || | |||||||| || | |||| || || | || |
Sbjct 977993 CTTAATAGGTGGAATTGTATGGATGGCATTGAACAAGTAGTCGGACTCTTTCTTGTCAGT 977934
Query 33848 AACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTG 33907
| ||| || ||||||||||| ||| | || || || ||||| |||| |||||
Sbjct 977933 GATATAGGTCTCGATCAAAAGGGAATAAGTCTCAGAGTGGATGTTCTCAACCATAATCTG 977874
Query 33908 AAATCCGTAGAAACATCTAGCCTC-GGTAATCTGCACTTCTG-TACAAAATCGTTC--TG 33963
|| || ||||| ||| ||||| ||||| |||||| ||| | || || |||| ||
Sbjct 977873 GAAACCATAGAAGGCTCTTGCCTCAGGTAA-CTGCAC--CTGCTTCATAA-AGTTCTGTG 977818
Query 33964 CTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAA 34023
| ||||| |||| || || ||||| || ||||| || ||||| ||| | || |
Sbjct 977817 CCAAATTCTCATCGACAATACCATCTGAAGCGGCAAAGAAGGCCAAGACACGAGAGATGA 977758
Query 34024 AATATTTTTCGTCTGGTGTTAGT----TTATTCCAATCATTGATATCTTTAGATATATCC 34079
| ||| | || | ||| || | | |||||| || | | ||| || || | |||
Sbjct 977757 AGTATCTCTCAT-TGGCATTCATCTTGTCATTCCAGTCGGTCAAATCCTTTGAGAGATCG 977699
Query 34080 ACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGA 34139
| || || | ||||| || || ||||| ||||| || ||||| | ||| || ||||
Sbjct 977698 ATCTCCTCGGCAGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATTTGCCATATATCATCG 977639
Query 34140 TATTGGATTGGGAAAATAACAAATCT 34165
|| || || ||||| || || |||||
Sbjct 977638 TACTGAATAGGGAACATCACGAATCT 977613
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629817379563840
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