Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10-
07] 28 sequences; 12,502,959 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq12 165 8e-36
seq23 107 2e-18
>seq12
Length=1682134
Score = 165 bits (182), Expect = 8e-36
Identities = 358/536 (67%), Gaps = 0/536 (0%)
Strand=Plus/Plus
Query 38014 TCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTA 38073
|| || || | |||||||||||| || | ||| | || | ||| ||||| | | |
Sbjct 1116086 TCCACACGCTTCATAAATAAATCTGGAATCCAAAGAGCTGGAAACAAATCACGTGCACGA 1116145
Query 38074 TATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCAT 38133
|| || || || ||||||||| | | ||| ||||| |||||||| |||||
Sbjct 1116146 ATCTCCTCTTTACCATGATTCTTTCTGATATCGATAAAGTCGAAGATATCAGCATGCCAA 1116205
Query 38134 GGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTA 38193
|| || | ||||| | || || |||||||| || | ||| || |||| | |||||||
Sbjct 1116206 GGCTCCAAGTAAATAGCAATGGCACCTGGTCTCTTGTTACCACCTTGATCCACATATCTA 1116265
Query 38194 ACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCG 38253
| || | || | | | | ||| || | |||||| || ||| | || || |||||
Sbjct 1116266 GCAGTACTGTTGAACACACGAACCATCGGAATTATACCGTTGGATGTACCATTAGTACCG 1116325
Query 38254 GATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGT 38313
| ||||| | ||| | | || || || || | || || ||||| |||
Sbjct 1116326 GCAATATACGAACCAGTGGAACGAATGTTGTGAATGTGAAGACCAATACCACCAGCAGTC 1116385
Query 38314 TTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTT 38373
|| || || ||||| || ||||| || ||||| | |||||||| ||| |||||| ||
Sbjct 1116386 TTAGAAATCAAAGCACACTGTTTCAAAGTATCGTAGATACCTTCAATAGAGTCATCTTTC 1116445
Query 38374 ATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTA 38433
|||| | || || || ||||| ||||| |||||| || || || || || ||
Sbjct 1116446 ATTGCAACTAAGAAGCATGATGACATCTGAGGGCGTGGAGTACCAGCATTGAACAACGTT 1116505
Query 38434 GGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCT 38493
|| ||||||||| |||| || | | |||| | | ||||| ||| | || | |
Sbjct 1116506 GGTGATGCATGTGTGAAGTATCTCTTTGACATCAAGTCATATGATTCCAACACCTTAGGA 1116565
Query 38494 ATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTC 38549
|||||| | || |||||||| | | || ||||| || | ||||||||||||||
Sbjct 1116566 ATATCATCACCATGAATACCGACGGCCACTCTCATAAGAAGGTGTTGTGGTCTTTC 1116621
>seq23
Length=1344041
Score = 107 bits (118), Expect = 2e-18
Identities = 548/868 (63%), Gaps = 28/868 (3%)
Strand=Plus/Minus
Query 11363 TCGAAAAAATTAGTCTTACCTTCTAGTGATATATACTCCATAAAGCTAAAAGGATTATAT 11422
|| || |||||||||||||| | | || |||| ||||| ||| || |||||
Sbjct 978469 TCAAAGAAATTAGTCTTACCAGCCAAGGAGATATTTTCCATGAAGTCGAATGGATTTGTG 978410
Query 11423 ACATTGAAGACTTTTTCACAACCTAACTCTGTTAATAATCTATCTGCGACGAATTCTATA 11482
|| ||| | || || || || || || | | | || || || || ||| || |
Sbjct 978409 ACGTTGTAAACCTTCTCGCATCCCAATGCGATAAGCAACCTGTCGGCACAGAACTCAACG 978350
Query 11483 TACTGAGACATTAAACAACAATTCATACCTATAAGATCCACCGGAATAGCAACTGTCAAA 11542
||||||| ||| | | | |||||||| | | | || |||| ||| || || |
Sbjct 978349 TACTGAGCCATCATATCGAAGTTCATACCGAGTAAAGAAACTGGAAGAGCGTCTCTCCAG 978290
Query 11543 AACTCCTTTTCTATATTAACCGCATCAATGATTATCGACGTTATAACTTCCTTAGATGGT 11602
|| || || |||||||| || || | || || | | |||| ||||| ||||
Sbjct 978289 AAAGTTTTCTCAATATTAACAGCCTCGGTCATGATTCTCTTGATAATGACCTTACTTGGT 978230
Query 11603 GGATGTAATAAATGTTTAAACATTAAACACGCAAAATCACAATGTAAACCTTCGTCTCTA 11662
||||| || || |||| | || |||||||| ||||| ||| || |||||
Sbjct 978229 GGATGCTTCAAGTGAGAGAACAAAAGGCATGCAAAATCGGTATGTAGACCCTCATCTCTG 978170
Query 11663 CTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAAT 11722
| || || || ||||| || || | || |||||||| |||| || || | ||| ||
Sbjct 978169 CAGATAAGCTCGTTAGAGAACGTAAGGCCTGGCATCAAACCTCTCTTCTTCAACCAGAAG 978110
Query 11723 ATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTT 11782
|| | ||||| || ||||| || || | || || | || ||||| || || | |||
Sbjct 978109 ATGGAGGCAAACGATCCAGAGAAAAACACACCTTCAATGGCAGCAAAAGCAACCAATCTC 978050
Query 11783 TCTCCATATA------CCTTGTTGCTAGATATCCATTTTCTGGCCCAATCAGCTTTCTTT 11836
|| |||| | | | ||| | ||||||| | ||||| ||| ||||
Sbjct 978049 TCAGCATACAAAGCATCATCATTGTT---TATCCATCTCAAAGCCCATAAAGCCTTCTCC 977993
Query 11837 TTTACGCATTCCATTGTTTCTATAGCGTTAAATAAAT----GCATTTTTTCTATATTATC 11892
|| | | ||||| | || || || || || | | | | |||| || ||
Sbjct 977992 TTAATAGGTGGAATTGTATGGATGGCATTGAACAAGTAGTCGGACTCTTTC----TTGTC 977937
Query 11893 TCTTACATATGTATCTATTAATAAACTATACATTTCTGAATGAATATTTT---CCATAGC 11949
| | ||| || || || || | ||| | || || || || || | |||||
Sbjct 977936 AGTGATATAGGTCTCGATCAAAAGGGAATAAGTCTCAGAGTGGATGTTCTCAACCATA-- 977879
Query 11950 TATTTGAAATCCATAGAAACATCGTGCCTCTGAACACTGTACAT-CCACATAAAATCTTT 12008
|| || || |||||||| || |||||| | |||| || | | |||||| | | |
Sbjct 977878 -ATCTGGAAACCATAGAAGGCTCTTGCCTCAGGTAACTGCACCTGCTTCATAAAGT-TCT 977821
Query 12009 CCGCTAAATTCTCATTTACAATACCATCACTAGATGCAAAAAATGCTAGTATATGTTTTA 12068
|| |||||||||| ||||||||||| || ||||| || || | | | | |
Sbjct 977820 GTGCCAAATTCTCATCGACAATACCATCTGAAGCGGCAAAGAAGGCCAAGACACGAGAGA 977761
Query 12069 TAAAGTATTTTTC---GTCTTTAGTTAATTTATCCCAATCATCTAAATCTTTTGATAAAT 12125
| |||||| | || | | || | | || ||| || ||||| ||||| | ||
Sbjct 977760 TGAAGTATCTCTCATTGGCATTCATCTTGTCATTCCAGTCGGTCAAATCCTTTGAGAGAT 977701
Query 12126 CTACTTCTTCAACGGTCCAAAAACTTGCCACTGATTGTTTATACATTTTCCAGATATCAT 12185
| | || || | ||||| ||| ||| | | | || ||||||| ||| |||||||
Sbjct 977700 CGATCTCCTCGGCAGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATTTGCCATATATCAT 977641
Query 12186 GATACTTAATAGGGAAAATAACGAACCT 12213
|||| ||||||||| || ||||| ||
Sbjct 977640 CGTACTGAATAGGGAACATCACGAATCT 977613
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468524636016320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |