Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10-
07] 28 sequences; 12,502,959 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq12 360 3e-94
seq23 185 1e-41
>seq12
Length=1682134
Score = 360 bits (398), Expect = 3e-94
Identities = 1383/2136 (65%), Gaps = 57/2136 (3%)
Strand=Plus/Plus
Query 64839 GTGAATTGAATGG---GAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTT 64895
|||||||| |||| |||||| || || ||||||| |||||||| || |||||
Sbjct 1114853 GTGAATTGGATGGCACGAGCGGCAGCCTGT---GTACGTAAGTAGTACATACCTGTTTTC 1114909
Query 64896 AGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACTCGGATCTGC 64954
| || |||| || ||||| ||||| || | ||| ||| | | ||||
Sbjct 1114910 AAGCCCTTCTTCCAGCCATAAAAGTGCATGGAAGTCAATTTACCCATAGTTGGTGACTGC 1114969
Query 64955 TATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTT 65014
| |||||| |||||||||||| || |||| | || ||||| || |||||||| |
Sbjct 1114970 AA-ATGGATGTTCATAGATTGAGACTGGCAGATGTATGCGCCCCTATCAGCAGCCATATC 1115028
Query 65015 TATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTG 65073
|||| | ||| || | ||| ||||||| || | || |||| ||| || | || |
Sbjct 1115029 GATGACAGACTTCTGAGAAATCTCCCAAACTGTCCTGTACAACTT-CTTGATCTTATCGG 1115087
Query 65074 GAAGGTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCAT 65130
||| ||||| |||||||| || || || || || ||||| || |||
Sbjct 1115088 GAACGTTTGGCAAGTTCTGAATAGAACCGTTGTCGTGAATGATGAAGTTCTTCATTGCAT 1115147
Query 65131 CATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATT 65190
| ||||||| | | || | | | |||| | | | |||||||| | || ||||
Sbjct 1115148 CGTTCCATATTCCCATGTCAATAAGATCTCTCAACATGTAAGGATTAACGATCTGGAATT 1115207
Query 65191 CTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTAT 65250
| |||| | ||||| | || || ||| ||| | ||||| | | | || ||||
Sbjct 1115208 CACCAGCAAGAACTCTTCTCTGATAGATGTTAGAGGTGAATGGTTCGAAACATTCGTTAT 1115267
Query 65251 TTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAA 65310
|||| ||| || | ||| || ||||||||||||||||||||||| | | |||||||
Sbjct 1115268 AACCCATAATCTGGGAAGTAGAAGCAGTCGGCATAGGTGCCACCAAAAGAGAGTTTCTAA 1115327
Query 65311 GACC-GTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACA 65369
|||| || | | || ||| | || |||| ||||| | ||| ||||||| ||
Sbjct 1115328 GACCAGTCTTGGCA-ATCTTAGCCTTCAGAGTATCCCAGTCCCACAGATCCGTAGGCTTT 1115386
Query 65370 ACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCG 65429
|||||||||||| || || || ||| ||||||| |
Sbjct 1115387 TTGTTCCACATATCATATTGTAGAATACCCTTTGAAGCTGGAGAGCCTTCATATGTCTGA 1115446
Query 65430 TATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTT 65489
|| | || || | | |||| || | |||| |||||| ||| ||| | |||
Sbjct 1115447 TAAGTACCCTCTTCCACAGCAAGCTGGTTGGATTCCTCCAATGCAGCGTGATACAAGGTC 1115506
Query 65490 TCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAG-AG 65548
|| || |||| | || || || |||| || | | ||||| || || | |||| |
Sbjct 1115507 TCAAATATCTGAATGTTAAGCTCCCGTGCATCTGGACAGTCAAAAGG-TAGTCTAAGCAT 1115565
Query 65549 AATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGA 65608
| || | || || | || || | ||||| | | |||||||| | |||| | || ||
Sbjct 1115566 GAAGAAGGTATCAGCAAGACCCTGGATACCAAGAGCAATAGGTCTGTTTCTCATGTTGGA 1115625
Query 65609 GATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTG-- 65666
| | || || |||| ||||| ||||| | || |||| || | || | |
Sbjct 1115626 GTTACGGGCCTCAGGAACTGGATAGTAATTTCTGTCAATAACACGGTTTAAGTTACGGGT 1115685
Query 65667 -ACAA--TTACT----TTGACCACATCCTTCAGTTTGAGAAAATCAA--ATCGCTCATCT 65717
|||| ||| | ||| || | || | |||| | | ||| ||| |||||||
Sbjct 1115686 AACAACTTTAGTAATCTTGTGCAACTTCTCGAAGTTGA-ACCAGCAATGATC-CTCATCT 1115743
Query 65718 -ATT--ACAAA--CATGTTCAATGCAACAGATG-CCAGATTACAAACGGCTACCTCATTA 65771
| | ||||| || | ||| ||| | || ||| ||||| || | |||||||
Sbjct 1115744 GACTCAACAAAGGCAGG--CAAA-CAAATGTTGGCCAAGTTACACACACCAACCTCATCT 1115800
Query 65772 GCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTT 65831
| | | || | | | |||| ||| | || | | |||||||| || || ||
Sbjct 1115801 GGAGAGGAGTACTCGACAACCTCACAGCACAAGTTCGAAGATTTGATGGTACCCAAGTTC 1115860
Query 65832 TGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCA 65891
| |||||||||||| | ||||| |||||||| || | ||||| || |||||||||||
Sbjct 1115861 TTCTGATTACTCTTTCTATTACAAGCATCCTTGTAGATCATGAAAGGTGTACCAGTTTCT 1115920
Query 65892 ATCTGAGATTCTATAATCGCTTTCCA-GACGACTCGAGCCTTTATTATAGAT-TTGTATC 65949
|||||| || | |||| | ||| || || ||||||| | | | | || |
Sbjct 1115921 GTCTGAGCCTCCAAAATCTGGTACCATAACTTCT-GAGCCTTCACTGTTCTTCTTCCACG 1115979
Query 65950 TCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCA 66009
|| |||| | ||||| | || |||||| ||||||||||| || |||||| |
Sbjct 1115980 TC-CTTCTTTCTCGTAACGAGTGTACAATTTCTCGAACTCGTCACCGTAAACATCTGAGA 1116038
Query 66010 ATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCA 66069
|| || ||| ||| | | ||| | ||||| ||| || ||| || ||||
Sbjct 1116039 GACCTGGTGCCTCAGAAGGAGAGAACAATGTCCACTTGTCGTTGCTCTCCACACGCTTCA 1116098
Query 66070 TAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTC 66129
|||| | ||| ||||||||||||||| ||| ||||| | | | | ||||| || |
Sbjct 1116099 TAAATAAATCTGGAATCCAAAGAGCTGGAAACAAATCACGTGCACGAATCTCCTCTTTAC 1116158
Query 66130 CTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATA 66189
| ||||||| | | ||||| || | | |||||| |||||| || |||||||| |
Sbjct 1116159 CATGATTCTTTCTGATATCGATAAAGTCGAAGATATCAGCATGCCAAGGCTCCAAGTAAA 1116218
Query 66190 TGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTAT 66249
| || || | || || | ||||| || || ||||| | |||||||| || | ||
Sbjct 1116219 TAGCAATGGCACCTGGTCTCTTGTTACCACCTTGATCCACATATCTAGCAGTACTGTTGA 1116278
Query 66250 AAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTC 66309
| || | | ||| ||||| ||||| |||||||||||||| || |||| ||||| |
Sbjct 1116279 ACACACGAACCATCGGAATTATACCGTTGGATGTACCATTAGTACCGGCAATATACGAAC 1116338
Query 66310 CACTTGCACGAATATTACTAAT-TGATAGACCTATTCCCCCTGCCATTTTAGAGATTAAT 66368
|| | | |||||| || ||| ||| ||||| || || || || | ||||| || ||
Sbjct 1116339 CAGTGGAACGAATGTTGTGAATGTGA-AGACCAATACCACCAGCAGTCTTAGAAATCAAA 1116397
Query 66369 GCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGA 66428
|| || |||| || ||||| ||||| || || ||| ||||| |||| || ||
Sbjct 1116398 GCACACTGTTTCAAAGTATCGTAGATACCTTCAATAGAGTCATCTTTCATTGCAACTAAG 1116457
Query 66429 AAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGC 66488
|| || ||||| || | || ||| || ||||| || || || || || || ||
Sbjct 1116458 AAGCATGATGACATCTGAGGGCGTGGAGTACCAGCATTGAACAACGTTGGTGATGCATGT 1116517
Query 66489 GTAAACCATTTTTCAGAAAGTAGATTGTACG-TCTCAATAGCTGAGTCTATATCCCATTG 66547
|| || || | | || | | | || | | ||| | || || |||||
Sbjct 1116518 GTGAAGTATCTCTTTGACATCAAGTCATATGATTCCAACACCTTAG-GAATATCATCACC 1116576
Query 66548 ATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTT 66607
|||||| || || || || | ||| | | ||| || ||||||||| | | ||| ||
Sbjct 1116577 ATGAATACCGACGGCCACTCTCATAAGAAGGTGTTGTGGTCTTTCAGCAACCTTACCATT 1116636
Query 66608 TATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 66667
||| |||||| || || ||||||||| || |||||||| |||||||| |||||
Sbjct 1116637 AATTCTCAACAGATAAGAACGTTCCAAAGTCTTGAAACCAAAGTAGTTGTAACTGAAGTC 1116696
Query 66668 TCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGT 66727
|| |||||| |||| | ||||| | | |||||||| | |||| ||| | |
Sbjct 1116697 ACGGTCGTAATTAATGGCTGAGTTCAACTCATCCTTATGCTCCATAAC--AATC--TTAT 1116752
Query 66728 AATACT----TGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTGAATA 66783
|| || ||||| || ||||| | ||| | || |||||| |||||| |||
Sbjct 1116753 AAACCTCATCAGAAATCATAGGAGACTTCTTCTGGGTCTTTGGATTGTAGTAGTTGTATA 1116812
Query 66784 AATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTA 66843
|||||| || || ||| || | || || || | ||||| | |||||| | || |
Sbjct 1116813 GATCCTCTATAACATCAGAGAAAGGCTTCTTAGTCTGCTTGTGCAAATTTGAGATTGCAA 1116872
Query 66844 TTCTAGCGGCTATAATGGCATAATCCGGATGTTGTGTAGTACAAGT-GGCTGCTATTTCG 66902
||||||||| | | | ||||| || ||||| ||| || || || ||||| ||||
Sbjct 1116873 GTCTAGCGGCCAAAGTAGCATAGTCTGGATGCATTGTGGT-CATGTATGCTGCAGTTTCA 1116931
Query 66903 GCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCA 66938
|| | || | ||||||| || | || || || |||
Sbjct 1116932 GCAGTCAAATTGTCCAACTCAATGGTGGTAACACCA 1116967
>seq23
Length=1344041
Score = 185 bits (204), Expect = 1e-41
Identities = 569/866 (66%), Gaps = 18/866 (2%)
Strand=Plus/Minus
Query 35888 TTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTG 35947
|| || || |||||||| ||||| | || || |||||||||||||| |||||||||||
Sbjct 978472 TTCTCAAAGAAATTAGTCTTACCAGCCAAGGAGATATTTTCCATGAAGTCGAATGGATTT 978413
Query 35948 ATAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCTGCGACA-AATTC 36006
| || || |||| || | |||||||| | || ||| || || || ||| || ||
Sbjct 978412 GTGACGTTGTAAACCTTCTCGCATCCCAATGCGATAAGCAACCTGTCGGC-ACAGAACTC 978354
Query 36007 TATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGT 36066
| || |||||| || | ||||| || | | |||||||||||| | |
Sbjct 978353 AACGTACTGAGCCATCATATCGAAGTTCATACCGAGTAAAGAAACTGGAAGAGCGTCTCT 978294
Query 36067 A-AGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGATATTACTGTTTCTTCAC 36125
||||| | || | ||||| || || || || || || | | | | | ||
Sbjct 978293 CCAGAAAGTTTTCT-CAATATTAACAGCCTCGGTCATGATTCTCTTGATAATGACCTTAC 978235
Query 36126 TCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGT 36185
| ||||||| | || || |||| | ||||| |||||| ||||||||||| |
Sbjct 978234 TTGGTGGATGCTTCAAGTGAGAGAACAAAAGGCATGCAAAATCGGTATGTAGACCCTCAT 978175
Query 36186 CTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCC 36245
|||| | || | ||||| || ||||| || || ||||| | || | ||| || | ||
Sbjct 978174 CTCTGCAGATAAGCTCGTTAGAGAACGTAAGGCCTGGCATCAAACCTCTCTTCTTCAACC 978115
Query 36246 AAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAA 36305
| || ||||| ||||| |||||||| || || | ||||| | || ||||| |||| |
Sbjct 978114 AGAAGATGGAGGCAAACGATCCAGAGAAAAACACACCTTCAATGGCAGCAAAAGCAACCA 978055
Query 36306 GTCTCTCTCCATAACCGGCACTGTCA---TGTATCCACTTTTGAGCCCAATCGGCCTTCT 36362
|||||| |||| ||| ||| | |||||| | |||||| |||||||
Sbjct 978054 ATCTCTCAGCATACAAAGCATCATCATTGTTTATCCATCTCAAAGCCCATAAAGCCTTCT 977995
Query 36363 TTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTT 36422
|| | | || ||||| | || ||||| || | |||| || || | ||
Sbjct 977994 CCTTAATAGGTGGAATTGTATGGATGGCATTGAACAAGTAGTCGGACTCTTTCTTGTCAG 977935
Query 36423 TAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTT 36482
| | ||| || || |||||||| ||| | || || || ||||| |||| || |
Sbjct 977934 TGATATAGGTCTCGATCAAAAGGGAATAAGTCTCAGAGTGGATGTTCTCAACCATAATCT 977875
Query 36483 GAAATCCGTAGAAACATCTAGCCTC-GGTAATCTGTACTTCTG-TACAAAATCGTTC--T 36538
| || || ||||| ||| ||||| ||||| ||| || ||| | || || |||| |
Sbjct 977874 GGAAACCATAGAAGGCTCTTGCCTCAGGTAA-CTGCAC--CTGCTTCATAA-AGTTCTGT 977819
Query 36539 GCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATA 36598
|| ||||| |||| || || || || || ||||| || ||||| ||| | ||
Sbjct 977818 GCCAAATTCTCATCGACAATACCATCTGAAGCGGCAAAGAAGGCCAAGACACGAGAGATG 977759
Query 36599 AAATATTTTTCGTTTGGTGTTAGTTT---ATTCCAATCATTGATATCTTTAGATATATCC 36655
|| ||| | || || | | | || |||||| || | | ||| || || | |||
Sbjct 977758 AAGTATCTCTCATTGGCATTCATCTTGTCATTCCAGTCGGTCAAATCCTTTGAGAGATCG 977699
Query 36656 ACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGA 36715
| || || | ||||| || || ||||| ||||| || ||||| | ||| || ||||
Sbjct 977698 ATCTCCTCGGCAGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATTTGCCATATATCATCG 977639
Query 36716 TATTGAATTGGAAAAATAACAAATCT 36741
|| ||||| || || || || |||||
Sbjct 977638 TACTGAATAGGGAACATCACGAATCT 977613
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658172569639520
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