Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10-
07] 28 sequences; 12,502,959 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq12 370 2e-97
seq23 185 1e-41
>seq12
Length=1682134
Score = 370 bits (410), Expect = 2e-97
Identities = 1389/2140 (65%), Gaps = 65/2140 (3%)
Strand=Plus/Plus
Query 78718 GTGAATTGAATGG---GAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTT 78774
|||||||| |||| |||||| || || ||||||| |||||||| || |||||
Sbjct 1114853 GTGAATTGGATGGCACGAGCGGCAGCCTGT---GTACGTAAGTAGTACATACCTGTTTTC 1114909
Query 78775 AGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGA-ATAACTCGGATCTGC 78833
| || |||| || || || ||||| || | ||| ||| | | ||||
Sbjct 1114910 AAGCCCTTCTTCCAGCCATAAAAGTGCATGGAAGTCAATTTACCCATAGTTGGTGACTGC 1114969
Query 78834 TATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTT 78893
| |||||| |||||||||||| || |||| | || ||||| || |||||||| |
Sbjct 1114970 AA-ATGGATGTTCATAGATTGAGACTGGCAGATGTATGCGCCCCTATCAGCAGCCATATC 1115028
Query 78894 TATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTG 78952
|||| | ||| || | ||| ||||||| || | || |||| ||| || | || |
Sbjct 1115029 GATGACAGACTTCTGAGAAATCTCCCAAACTGTCCTGTACAACTT-CTTGATCTTATCGG 1115087
Query 78953 GAAGGTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTT 79009
||| ||||| |||||||| || || || || || ||||| || | |
Sbjct 1115088 GAACGTTTGGCAAGTTCTGAATAGAACCGTTGTCGTGAATGATGAAGTTCTTCATTGCAT 1115147
Query 79010 CATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATT 79069
| ||||||| | | || | | | |||| | | | |||||||| | || ||||
Sbjct 1115148 CGTTCCATATTCCCATGTCAATAAGATCTCTCAACATGTAAGGATTAACGATCTGGAATT 1115207
Query 79070 CTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTAT 79129
| |||| | ||||| | || || ||| ||| ||||||| | |||| ||||
Sbjct 1115208 CACCAGCAAGAACTCTTCTCTGATAGATGTTAGAGGTGAATGGTTCGAAACATTCGTTAT 1115267
Query 79130 TTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAA 79189
|||| ||| || | ||| || || || ||||||||||||||||| | | |||||||
Sbjct 1115268 AACCCATAATCTGGGAAGTAGAAGCAGTCGGCATAGGTGCCACCAAAAGAGAGTTTCTAA 1115327
Query 79190 GACC-GTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACA 79248
|||| || | | || ||| | || |||| ||||| ||||| ||||| | ||
Sbjct 1115328 GACCAGTCTTGGCA-ATCTTAGCCTTCAGAGTATCCCAGTCCCACAGATCCGTAGGCTTT 1115386
Query 79249 ACATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATGTTTCA 79308
||||| | |||||||||||||||||| || ||| || ||| ||||| | |
Sbjct 1115387 TTGTTCCACATATCATATTGTAGAATACCCTTTGAAGCTGGAGAGCCTTCATATGTCTGA 1115446
Query 79309 TAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTT 79368
|||| || || | | || | | |||| ||||| ||| ||| | |||
Sbjct 1115447 TAAGTACCCTCTTCCACAGCAAGCTGGTTGGATTCCTCCAATGCAGCGTGATACAAGGTC 1115506
Query 79369 TCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTTAAG-AG 79427
|| || |||| | || || || |||| ||| | | ||||| || || | |||| |
Sbjct 1115507 TCAAATATCTGAATGTTAAGCTCCCGTGCATCTGGACAGTCAAAAGG-TAGTCTAAGCAT 1115565
Query 79428 AATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGA 79487
| || | || || | || || | ||||| | | |||||||| | |||| | || ||
Sbjct 1115566 GAAGAAGGTATCAGCAAGACCCTGGATACCAAGAGCAATAGGTCTGTTTCTCATGTTGGA 1115625
Query 79488 AATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTG-- 79545
| || || |||| ||||| ||||| | || |||| || | || | |
Sbjct 1115626 GTTACGGGCCTCAGGAACTGGATAGTAATTTCTGTCAATAACACGGTTTAAGTTACGGGT 1115685
Query 79546 ----ACTAT--TACT-TTGACCACATCCTTTAGTTTGAGAAAATCAA--ATCGTCCATCT 79596
||| | || | ||| || | || | |||| | | ||| ||| || ||||
Sbjct 1115686 AACAACTTTAGTAATCTTGTGCAACTTCTCGAAGTTGA-ACCAGCAATGATCCTC-ATCT 1115743
Query 79597 -ATT--ACAAA--CATGTTCAACGCGACAGATG----CCAGATTACAAACGGCTACCTCA 79647
| | ||||| || | ||| ||| ||| ||| ||||| || | ||||||
Sbjct 1115744 GACTCAACAAAGGCAGG--CAA----ACAAATGTTGGCCAAGTTACACACACCAACCTCA 1115797
Query 79648 TTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAA 79707
| | | | || | | | ||| ||| | ||| | | || ||||| || ||
Sbjct 1115798 TCTGGAGAGGAGTACTCGACAACCTCACAGCACAAGTTCGAAGATTTGATGGTACCCAAG 1115857
Query 79708 TTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTT 79767
|| | |||||||||||| | ||||| |||||||| || | ||||| || |||||||||
Sbjct 1115858 TTCTTCTGATTACTCTTTCTATTACAAGCATCCTTGTAGATCATGAAAGGTGTACCAGTT 1115917
Query 79768 TCAATCTGAGATTCTATAATCGCTTTCCAGA-CGACTCGAGCCTTTATTATAGACTTGTA 79826
|| |||||| || | |||| | ||| | | || ||||||| | | | ||| |
Sbjct 1115918 TCTGTCTGAGCCTCCAAAATCTGGTACCATAACTTCT-GAGCCTTCACTGTT--CTTCTT 1115974
Query 79827 TCTCTT--TTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCG 79884
| | | |||| | ||||| | || || ||| ||||||||||| || |||||||
Sbjct 1115975 CCACGTCCTTCTTTCTCGTAACGAGTGTACAATTTCTCGAACTCGTCACCGTAAACATCT 1116034
Query 79885 TCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGT 79944
| || || || |||| | | ||| | ||||| | | || || ||
Sbjct 1116035 GAGAGACCTGGTGCCTCAGAAGGAGAGAACAATGTCCACTTGTCGTTGCTCTCCACACGC 1116094
Query 79945 TTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCG 80004
|||||||| | ||| ||||||||||||||| ||| | ||| | | | | ||||||
Sbjct 1116095 TTCATAAATAAATCTGGAATCCAAAGAGCTGGAAACAAATCACGTGCACGAATCTCCTCT 1116154
Query 80005 TTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAG 80064
|| || ||||||| | | ||||| || | | ||||||| |||||| || ||||||
Sbjct 1116155 TTACCATGATTCTTTCTGATATCGATAAAGTCGAAGATATCAGCATGCCAAGGCTCCAAG 1116214
Query 80065 TATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTA 80124
|| || || || | || |||| ||||| || || ||||| | |||||||| || |
Sbjct 1116215 TAAATAGCAATGGCACCTGGTCTCTTGTTACCACCTTGATCCACATATCTAGCAGTACTG 1116274
Query 80125 TTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAG 80184
|| | || | | ||| ||||| ||||| |||||||||||||| || |||| |||||
Sbjct 1116275 TTGAACACACGAACCATCGGAATTATACCGTTGGATGTACCATTAGTACCGGCAATATAC 1116334
Query 80185 CTTCCACTGGCACGAATATTACTAAT-TGATAGACCTATTCCCCCTGCCATTTTAGAGAT 80243
||| ||| |||||| || ||| ||| ||||| || || || || | ||||| ||
Sbjct 1116335 GAACCAGTGGAACGAATGTTGTGAATGTGA-AGACCAATACCACCAGCAGTCTTAGAAAT 1116393
Query 80244 TAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAG 80303
|| || || |||| || ||||| ||||| || || || ||||| |||| ||
Sbjct 1116394 CAAAGCACACTGTTTCAAAGTATCGTAGATACCTTCAATAGAGTCATCTTTCATTGCAAC 1116453
Query 80304 TAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGC 80363
|| || || ||||| || | || ||| || ||||| || || || || || ||
Sbjct 1116454 TAAGAAGCATGATGACATCTGAGGGCGTGGAGTACCAGCATTGAACAACGTTGGTGATGC 1116513
Query 80364 GTGCGTAAACCATTTTTCAGACAGTAGATTGTACG-TCTCAATAGCTGATTCTATATCCC 80422
|| || || || | | |||| | | || | | ||| | || | |||||
Sbjct 1116514 ATGTGTGAAGTATCTCTTTGACATCAAGTCATATGATTCCAACACCTTA-GGAATATCAT 1116572
Query 80423 ATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGT 80482
|||||| || || || || | ||| | | ||| || ||||||||| | | |||
Sbjct 1116573 CACCATGAATACCGACGGCCACTCTCATAAGAAGGTGTTGTGGTCTTTCAGCAACCTTAC 1116632
Query 80483 TATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAA 80542
||| ||| |||||| ||||| ||||||||| || |||||||| |||||||| |
Sbjct 1116633 CATTAATTCTCAACAGATAAGAACGTTCCAAAGTCTTGAAACCAAAGTAGTTGTAACTGA 1116692
Query 80543 AGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCA 80602
|||| || |||||| |||| | ||||| | | |||||||| | |||| |||
Sbjct 1116693 AGTCACGGTCGTAATTAATGGCTGAGTTCAACTCATCCTTATGCTCCATAAC--AATC-- 1116748
Query 80603 TGGTGATACT----TGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTG 80658
| | | || ||||| || ||||| | ||| | || ||||| ||||||
Sbjct 1116749 TTATAAACCTCATCAGAAATCATAGGAGACTTCTTCTGGGTCTTTGGATTGTAGTAGTTG 1116808
Query 80659 AATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACG 80718
||| |||||| || || ||| || | || || || | |||||| | |||||| |
Sbjct 1116809 TATAGATCCTCTATAACATCAGAGAAAGGCTTCTTAGTCTGCTTGTGCAAATTTGAGATT 1116868
Query 80719 GCTATTCTGGCGGCTAAAATGGCATAATCTGGATGTTGTGTAGTACAAGT-GGCTGCTAT 80777
|| | ||| ||||| ||| | ||||| |||||||| ||| || || || ||||| |
Sbjct 1116869 GCAAGTCTAGCGGCCAAAGTAGCATAGTCTGGATGCATTGTGGT-CATGTATGCTGCAGT 1116927
Query 80778 TTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCA 80817
||| || | || | ||||||| || | || || || |||
Sbjct 1116928 TTCAGCAGTCAAATTGTCCAACTCAATGGTGGTAACACCA 1116967
>seq23
Length=1344041
Score = 185 bits (204), Expect = 1e-41
Identities = 569/866 (66%), Gaps = 18/866 (2%)
Strand=Plus/Minus
Query 49690 TTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTG 49749
|| || || |||||||| || || |||| || |||||||||||||| || || |||||
Sbjct 978472 TTCTCAAAGAAATTAGTCTTACCAGCCAAGGAGATATTTTCCATGAAGTCGAATGGATTT 978413
Query 49750 GTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCCGCGACA-AATTC 49808
|| || || |||| || | |||||||| | || ||| || || || ||| || ||
Sbjct 978412 GTGACGTTGTAAACCTTCTCGCATCCCAATGCGATAAGCAACCTGTCGGC-ACAGAACTC 978354
Query 49809 TATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGT 49868
| || |||||| || | ||||| || | | |||||||||||| | |
Sbjct 978353 AACGTACTGAGCCATCATATCGAAGTTCATACCGAGTAAAGAAACTGGAAGAGCGTCTCT 978294
Query 49869 A-AGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGATCTAACGGTTTCTTCAC 49927
||||| | || | |||| || || || || || || | | | | | ||
Sbjct 978293 CCAGAAAGTTTTCT-CAATATTAACAGCCTCGGTCATGATTCTCTTGATAATGACCTTAC 978235
Query 49928 TCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGT 49987
| ||||||||| || || |||| | ||||| |||||| || |||||||| |
Sbjct 978234 TTGGTGGATGCTTCAAGTGAGAGAACAAAAGGCATGCAAAATCGGTATGTAGACCCTCAT 978175
Query 49988 CTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCC 50047
|||| | || || ||||| || ||||| || || ||||| | || | ||| || | ||
Sbjct 978174 CTCTGCAGATAAGCTCGTTAGAGAACGTAAGGCCTGGCATCAAACCTCTCTTCTTCAACC 978115
Query 50048 AAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAA 50107
| || ||||| ||||| || ||||| || || | ||||| | || ||||| ||||| |
Sbjct 978114 AGAAGATGGAGGCAAACGATCCAGAGAAAAACACACCTTCAATGGCAGCAAAAGCAACCA 978055
Query 50108 GTCTCTCTCCATAACTGGCGCTGTCATG---TATCCACTTTTGAGCCCAATCGGCCTTCT 50164
|||||| |||| || |||| |||||| | |||||| |||||||
Sbjct 978054 ATCTCTCAGCATACAAAGCATCATCATTGTTTATCCATCTCAAAGCCCATAAAGCCTTCT 977995
Query 50165 TTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTT 50224
|| | | || || || | |||||||| || | |||| || || | ||
Sbjct 977994 CCTTAATAGGTGGAATTGTATGGATGGCATTGAACAAGTAGTCGGACTCTTTCTTGTCAG 977935
Query 50225 TAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCT 50284
| | ||| || ||||||||||| ||| | || || || ||||| |||| ||||
Sbjct 977934 TGATATAGGTCTCGATCAAAAGGGAATAAGTCTCAGAGTGGATGTTCTCAACCATAATCT 977875
Query 50285 GAAATCCGTAGAAACATCTAGCCTC-GGTAATCTGCACTTCTG-TACAAAATCGTTC--A 50340
| || || ||||| ||| ||||| ||||| |||||| ||| | || || ||||
Sbjct 977874 GGAAACCATAGAAGGCTCTTGCCTCAGGTAA-CTGCAC--CTGCTTCATAA-AGTTCTGT 977819
Query 50341 GCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATA 50400
|| ||||| |||| || || || || || ||||| || ||||| ||| | ||
Sbjct 977818 GCCAAATTCTCATCGACAATACCATCTGAAGCGGCAAAGAAGGCCAAGACACGAGAGATG 977759
Query 50401 AAATGTTTTTCGTTGGGTGTTAGTTT---ATTCCAATCATTGATATCTTTAGATATATCT 50457
|| | | | || |||| | | || |||||| || | | ||| || || | |||
Sbjct 977758 AAGTATCTCTCATTGGCATTCATCTTGTCATTCCAGTCGGTCAAATCCTTTGAGAGATCG 977699
Query 50458 ACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGA 50517
| || || | ||||| || || ||||| ||||| || ||||| | ||| || ||||
Sbjct 977698 ATCTCCTCGGCAGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATTTGCCATATATCATCG 977639
Query 50518 TATTGGATTGGGAAAATAACAAATCT 50543
|| || || ||||| || || |||||
Sbjct 977638 TACTGAATAGGGAACATCACGAATCT 977613
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718268548605920
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