Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10-
07] 28 sequences; 12,502,959 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq23 165 8e-36
>seq23
Length=1344041
Score = 165 bits (182), Expect = 8e-36
Identities = 584/902 (65%), Gaps = 19/902 (2%)
Strand=Plus/Minus
Query 13595 AACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCAAA 13654
|||||| || |||||||| ||||| ||||| ||| || ||||||||||| || || ||
Sbjct 978479 AACTCTCTTCTCAAAGAAATTAGTCTTACCAGCCAAGGAGATATTTTCCATGAAGTCGAA 978420
Query 13655 TGGATTTATTGACATAA-ACACTTTATCACAACCTAGTTCTAATAGTAATCTATCAGCAA 13713
||||||| | ||| | | || || || || || | | | | || || || || |||
Sbjct 978419 TGGATTTGT-GACGTTGTAAACCTTCTCGCATCCCAATGCGATAAGCAACCTGTCGGCAC 978361
Query 13714 TAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTA 13773
||||||| || |||| ||| | ||| | |||||||| | || || ||||
Sbjct 978360 AGAACTCAACGTACTGAGCCATCATATCGAAGTTCATACCGAGTAAAGAAACTGGAAGAG 978301
Query 13774 TATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATAATAATTGTAATAATCT 13833
| | | || ||| || ||| |||||||| | || || | | |||||
Sbjct 978300 CGTCTCTCCAGAAAGTTTTCTCAATATTAACAGCCTCGGTCATGATTCTCTTGATAATGA 978241
Query 13834 CATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGC 13893
| ||| || |||| || | || || | | || |||||||| ||| || |
Sbjct 978240 CCTTACTTGGTGGATGCTTCAAGTGAGAGAACAAAAGGCATGCAAAATCGGTATGTAGAC 978181
Query 13894 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13953
|||||||||| | ||||| ||||| || || || | ||||||||||| |||| || |
Sbjct 978180 CCTCATCTCTGCAGATAAGCTCGTTAGAGAACGTAAGGCCTGGCATCAAACCTCTCTTCT 978121
Query 13954 ttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14013
| ||||| || || | ||||| || || || || || | || |||| |||||||| |
Sbjct 978120 TCAACCAGAAGATGGAGGCAAACGATCCAGAGAAAAACACACCTTCAATGGCAGCAAAAG 978061
Query 14014 CTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAG 14073
| | |||| || || || | || | | || ||||||| | ||||||| ||
Sbjct 978060 CAACCAATCTCTCAGCATACAAAGCATCATCATTGTTTATCCATCTCAAAGCCCATAAAG 978001
Query 14074 AtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATATTCCTTCTCTTTAG 14133
|| | |||||| ||||| | || ||||| || || || || ||||||
Sbjct 978000 CCTTCTCCTTAATAGGTGGAATTGTATGGATGGCATTGAACAAGTAGTCGGACTCTTTCT 977941
Query 14134 TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTT---CCA 14190
| | || || || || || | | | ||| | |||||||| ||||| | |||
Sbjct 977940 TGTCAGTGATATAGGTCTCGATCAAAAGGGAATAAGTCTCAGAGTGGATGTTCTCAACCA 977881
Query 14191 TAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTCCGAGTAAAATC 14250
|| ||||| |||||||| ||| ||| || || | | || || | | |||
Sbjct 977880 TA---ATCTGGAAACCATAGAAGGCTCTTGCCTCAGGTAACTGCACCTGCTTCATAAAGT 977824
Query 14251 TTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTT 14310
| | |||||||| |||| || |||||||| ||| ||||| || ||||| |
Sbjct 977823 TCTGTGCCAAATTCTCATCGACAATACCATCTGAAGCGGCAAAGAAGGCCAAGACACGAG 977764
Query 14311 TAATAAAGTATTGCTCTTCATTG---TTGAGTTT---TTTCCAATCGGATAAATCCTTAG 14364
|| |||||| ||| |||||| || | || ||||| |||| |||||||| |
Sbjct 977763 AGATGAAGTAT--CTC-TCATTGGCATTCATCTTGTCATTCCAGTCGGTCAAATCCTTTG 977707
Query 14365 AAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATA 14424
| ||||| | || || | ||||| ||| || | || || || |||||| |||||
Sbjct 977706 AGAGATCGATCTCCTCGGCAGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATTTGCCATA 977647
Query 14425 TTTCTTTATATAATATAGGAAAAACTACAAATCTCGAAGATGTT-TCTTTAAGAATTGGT 14483
| || | || ||||| || | || ||||| | |||||| || || || | |||
Sbjct 977646 TATCATCGTACTGAATAGGGAACATCACGAATCT-GTGGATGTTCTCCTTGAGCAATGGC 977588
Query 14484 TC 14485
||
Sbjct 977587 TC 977586
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479727832095200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |