Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10-
07] 28 sequences; 12,502,959 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq23 190 2e-43
>seq23
Length=1344041
Score = 190 bits (210), Expect = 2e-43
Identities = 587/899 (65%), Gaps = 13/899 (1%)
Strand=Plus/Minus
Query 13383 AACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCGAA 13442
|||||| || ||||| || ||||| ||||| ||| || ||||||||||| || |||||
Sbjct 978479 AACTCTCTTCTCAAAGAAATTAGTCTTACCAGCCAAGGAGATATTTTCCATGAAGTCGAA 978420
Query 13443 TGGATTTGTTGACATAA-ACACTTTATCACAACCTAGTTCTAATAATAATCTATCAGCAA 13501
||||||||| ||| | | || || || || || | | | | | || || || |||
Sbjct 978419 TGGATTTGT-GACGTTGTAAACCTTCTCGCATCCCAATGCGATAAGCAACCTGTCGGCAC 978361
Query 13502 TAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTA 13561
||||||| || |||| ||| | ||| | |||||||| | || || ||||
Sbjct 978360 AGAACTCAACGTACTGAGCCATCATATCGAAGTTCATACCGAGTAAAGAAACTGGAAGAG 978301
Query 13562 TATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAATCTTAATAATGT 13621
| | | || ||| || ||| ||||||||| | || || |||| ||||||
Sbjct 978300 CGTCTCTCCAGAAAGTTTTCTCAATATTAACAGCCTCGGTCATGATTCTCTTGATAATGA 978241
Query 13622 CATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGC 13681
| ||| || |||| || | || || | | || |||||||| ||| || |
Sbjct 978240 CCTTACTTGGTGGATGCTTCAAGTGAGAGAACAAAAGGCATGCAAAATCGGTATGTAGAC 978181
Query 13682 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13741
|||||||||| | ||||| ||||| || || || | ||||||||||| |||| || |
Sbjct 978180 CCTCATCTCTGCAGATAAGCTCGTTAGAGAACGTAAGGCCTGGCATCAAACCTCTCTTCT 978121
Query 13742 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 13801
| ||||| || || | || || ||||| || || || | || |||| |||||||| |
Sbjct 978120 TCAACCAGAAGATGGAGGCAAACGATCCAGAGAAAAACACACCTTCAATGGCAGCAAAAG 978061
Query 13802 CTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATTCAG 13861
| | | || || || || | || | | || ||||||| | ||||||| ||
Sbjct 978060 CAACCAATCTCTCAGCATACAAAGCATCATCATTGTTTATCCATCTCAAAGCCCATAAAG 978001
Query 13862 AtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAAATGTTCCTTCTCTTTAG 13921
|| | |||||| ||||| | ||| |||||||| || | || ||||||
Sbjct 978000 CCTTCTCCTTAATAGGTGGAATTGTATGGATGGCATTGAACAAGTAGTCGGACTCTTTCT 977941
Query 13922 TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAG 13981
| | || || || || || | | | ||| | |||||||| ||||| || |
Sbjct 977940 TGTCAGTGATATAGGTCTCGATCAAAAGGGAATAAGTCTCAGAGTGGATGTTCTCAACCA 977881
Query 13982 CTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCCGAGTAAAATCTTT 14041
||||| |||||||| || ||| || || | | || |||| | ||| | |
Sbjct 977880 TAATCTGGAAACCATAGAAGGCTCTTGCCTCAGGTAACTGCACCTGCTTCATAAAGTTCT 977821
Query 14042 CTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAA 14101
|||||| || |||| ||||||||||| ||| ||||| || ||||| | |
Sbjct 977820 GTGCCAAATTCTCATCGACAATACCATCTGAAGCGGCAAAGAAGGCCAAGACACGAGAGA 977761
Query 14102 TAAAGTATTGCTCTTCATTG---TTGAGTTT---TTTCCAATCGGCTAAATCCTTAGAAA 14155
| |||||| ||| |||||| || | || ||||| |||| |||||||| || |
Sbjct 977760 TGAAGTAT--CTC-TCATTGGCATTCATCTTGTCATTCCAGTCGGTCAAATCCTTTGAGA 977704
Query 14156 GATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATATTT 14215
|||| | || || | ||||| ||| || | || || || |||||| |||||| |
Sbjct 977703 GATCGATCTCCTCGGCAGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATTTGCCATATAT 977644
Query 14216 CTTTATATAATATAGGAAAAACTACAAATCTTGAAGATGTT-TCTTTAAGAATTGGCTC 14273
| | || ||||| || | || |||| || |||||| || || || | ||||||
Sbjct 977643 CATCGTACTGAATAGGGAACATCACGAATC-TGTGGATGTTCTCCTTGAGCAATGGCTC 977586
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478588632493920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |