Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10-
07] 28 sequences; 12,502,959 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq23 104 3e-17
>seq23
Length=1344041
Score = 104 bits (114), Expect = 3e-17
Identities = 370/570 (65%), Gaps = 10/570 (2%)
Strand=Plus/Plus
Query 124996 TGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTT 125055
|||| || || ||| |||| || ||| |||||||||| ||||| ||||||| || |
Sbjct 977623 TGTTCCCTATTCAGTACGATGATATATGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCT 977682
Query 125056 GGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGA-GACTCGTTTGACT 125114
|||| | ||| ||| ||||||| || ||||| || ||| ||| | ||| | | || |
Sbjct 977683 GGACTGCCGAGGAGATCGATCTCTCAAAGGATTTGACCGACTGGAATGACAAGAT-GAAT 977741
Query 125115 GAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATC 125174
| | |||| || | || || || | | |||||||||||||||| || ||||| ||
Sbjct 977742 GCCAATGAGAGATACTTCATCTCTCGTGTCTTGGCCTTCTTTGCCGCTTCAGATGGTATT 977801
Query 125175 GTCAACGACAATCTGTTGACACGATTCTCTCAAG-AGTTGACCATTCCAGAGGTGTCGTG 125233
||| | || ||| || ||| | | | | ||| || || | || ||||
Sbjct 977802 GTCGATGAGAATTTG-GCACAGAACTTTATGAAGCAGGTGCAGTTACCTGAGGCAAGAGC 977860
Query 125234 CTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGAT 125293
||| || || ||||| || ||| |||||||| | ||||| || | || || ||||
Sbjct 977861 CTTCTATGGTTTCCAGATTATGGTTGAGAACATCCACTCTGAGACTTATTCCCTTTTGAT 977920
Query 125294 TGACATGTACATTCGCGATCCGCAA-CGT--AAACACATGCTCTTTAACGCAATCGACAC 125350
|| | || || || | || || | || || || || || ||| | ||
Sbjct 977921 CGAGACCTATATCACTGACAAGAAAGAGTCCGACTACTTG---TTCAATGCCATCCATAC 977977
Query 125351 GGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTC 125410
| || |||| | |||||| ||||| | | ||||| | | || | |
Sbjct 977978 AATTCCACCTATTAAGGAGAAGGCTTTATGGGCTTTGAGATGGATAAACAATGATGATGC 978037
Query 125411 TTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAG 125470
|| ||| || || ||| |||| || || || ||| | || || | || || || ||
Sbjct 978038 TTTGTATGCTGAGAGATTGGTTGCTTTTGCTGCCATTGAAGGTGTGTTTTTCTCTGGATC 978097
Query 125471 TTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAA 125530
||||| ||||||| ||| | |||||| | || | ||||| || || ||| | |||
Sbjct 978098 GTTTGCCTCCATCTTCTGGTTGAAGAAGAGAGGTTTGATGCCAGGCCTTACGTTCTCTAA 978157
Query 125531 CGAGTTTATATCTCGAGACGAGGGCCTACA 125560
|||| |||| | |||| ||||| |||||
Sbjct 978158 CGAGCTTATCTGCAGAGATGAGGGTCTACA 978187
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741058940629280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |