Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10-
07] 28 sequences; 12,502,959 total letters
Query= NC_005068.1
Length=110907
Score E
Sequences producing significant alignments: (Bits) Value
seq12 91.5 1e-13
seq1 82.4 5e-11
>seq12
Length=1682134
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAAT-CGT 43952
||| ||||||||||| || ||||| || || || ||| || || || || || | ||
Sbjct 1445798 ACCACCTCTCAATCTCAAGACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCCGA 1445857
Query 43953 TTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAG 44012
|| | || |||| ||||| || || || ||||| ||||| | ||||| || | |
Sbjct 1445858 CAAAGTTCTGC-CATCCTCCAACTGCTTACCAGCAAAGATCAATCTCTGCTGATCTGGTG 1445916
Query 44013 GTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCA 44072
| | || || || ||| || ||||| ||||| | ||| || || | | |||||
Sbjct 1445917 GGATTCCCTCCTTGTCTTGGATCTTTTGCTTGACATTGTCAATGGTGTCGGAAGACTCCA 1445976
Query 44073 CATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
| || | || || || |||||||| |||||||| || || ||||||||
Sbjct 1445977 CCTCCAAGGTGATAGTCTTACCGGTCAAAGTCTTAACGAAAATTTGCAT 1446025
>seq1
Length=1824870
Score = 82.4 bits (90), Expect = 5e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953
||||||||||||||| || ||||| || || || || || ||||| || || ||
Sbjct 738153 ACCTCCTCTCAATCTCAAGACCAAGTGAAGAGTAGATTCCTTCTGAATGTTGTAGTCAGA 738094
Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013
|| | |||| ||||| || || || ||||| ||||| | || || || | ||
Sbjct 738093 CAAAGTTCTACCATCCTCCAACTGCTTACCAGCAAAGATCAATCTCTGTTGATCAGGTGG 738034
Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073
| || || ||||| || ||||| ||||| | ||| ||||| | | ||||||
Sbjct 738033 AATTCCCTCCTTATCCTGGATCTTTTGCTTGACATTGTCAATGGTATCGGAAGACTCCAC 737974
Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|| | || || || ||||| || || ||||| || || ||||||||
Sbjct 737973 CTCCAAGGTGATAGTCTTACCCGTCAAGGTCTTAACGAAAATTTGCAT 737926
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 354777478932144
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |