Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10- 07] 28 sequences; 12,502,959 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq1 111 1e-19 seq12 96.9 3e-15 >seq1 Length=1824870 Score = 111 bits (122), Expect = 1e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 ||||||| || ||||| ||||| || || |||||||| || || |||||||| || | Sbjct 738152 CCTCCTCTCAATCTCAAGACCAAGTGAAGAGTAGATTCCTTCTGAATGTTGTAGTCAGAC 738093 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | |||| || ||| ||||| || || || ||| | || | ||||||||||| || Sbjct 738092 AAAGTTCTACCATCCTCCAACTGCTTACCAGCAAAGATCAATCTCTGTTGATCAGGTGGA 738033 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | || || || || || ||||| || || | | ||| | |||| || ||| Sbjct 738032 ATTCCCTCCTTATCCTGGATCTTTTGCTTGACATTGTCAATGGTATCGGAAGACTCCACC 737973 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATTTTT 20212 |||| ||| || || || || ||||| || || || ||||||||||||||| Sbjct 737972 TCCAAGGTGATAGTCTTACCCGTCAAGGTCTTAACGAAAATTTGCATTTTT 737922 >seq12 Length=1682134 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 19979 TTTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCG 20038 || || |||| || ||||| ||||| || || ||||| || || || |||||||| || Sbjct 1445796 TTACCACCTCTCAATCTCAAGACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCC 1445855 Query 20039 CCCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACG 20098 || |||| | ||| ||||| || || || ||| | || | ||||| ||||| Sbjct 1445856 GACAAAGTTCTGCCATCCTCCAACTGCTTACCAGCAAAGATCAATCTCTGCTGATCTGGT 1445915 Query 20099 GGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCC 20158 || | || || ||||| || ||||| || || | | ||| | ||| || ||| Sbjct 1445916 GGGATTCCCTCCTTGTCTTGGATCTTTTGCTTGACATTGTCAATGGTGTCGGAAGACTCC 1445975 Query 20159 GTTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATTTT 20211 |||| ||| || || || |||||||| || || || |||||||||||||| Sbjct 1445976 ACCTCCAAGGTGATAGTCTTACCGGTCAAAGTCTTAACGAAAATTTGCATTTT 1446028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419587056815868