Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10-
07] 28 sequences; 12,502,959 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq1 172 7e-38
>seq1
Length=1824870
Score = 172 bits (190), Expect = 7e-38
Identities = 394/587 (67%), Gaps = 22/587 (4%)
Strand=Plus/Plus
Query 164398 AATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCAGACGA 164457
|| |||||||| ||||| | ||||| | || ||||| | || |||||| ||
Sbjct 571356 AAGTTTGAAGATATGGGTATCGGTGGTTTGGACAATGAATTCACCTCCATCTTCAGAAGA 571415
Query 164458 GCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGGCTGTAAACATATA 164517
|||||||| || ||| ||||| | || || | || || || | |||| |
Sbjct 571416 GCATTTGCCTCAAGAATCTTTCCTCCAGCGTTAGTAGAGAAGTTGGGAATTCAACACGTC 571475
Query 164518 AAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGCATT 164577
||||| || | ||| |||||||||| ||| || || || ||||| ||| || |||
Sbjct 571476 AAAGGTATGCTCTTATATGGACCTCCAGGTACAGGAAAGACTTTAATTGCTAGACAAATT 571535
Query 164578 GCTCAAGCTTTTAAATCGC----GACCCGTTAAAATTGTTAATGGTCCTGAATTATTGAA 164633
| | || | |||||| || || || |||||||| |||||||||||| | |||
Sbjct 571536 GGTAAAA-TGTTAAAT-GCTAAGGAGCCA--AAAATTGTCAATGGTCCTGAAATCTTGTC 571591
Query 164634 CAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGAAGA 164693
||||||||| ||| || |||| || ||||||| |||||| | || || || | |||
Sbjct 571592 CAAATATGTTGGTTCTTCGGAAGAGAACATTAGAAATTTGTTTAAAGATGCAGAGGCAGA 571651
Query 164694 ACAAAAGAAAGCAGGTTTAGC-TAGTAAATTACATGTTATTGTTTTTGATGAGATAGATG 164752
| | ||| | ||| || | || || ||| ||||| | ||||| ||| | |||
Sbjct 571652 ATACAAGCAGAAAGGGGATGCGTCGTCCCTT-CATATTATTATATTTGACGAGTTGGATT 571710
Query 164753 CTCTTTGCAAAAAACGTGGT------GATAATATTATTCATGATGC------AGTGGTTA 164800
|| | | ||| |||||||| | | || || | || ||| ||||| |
Sbjct 571711 CTATATTCAAGCAACGTGGTTCGAGAGGTGATGGTACTGGTGTTGCCGACAATGTGGTGA 571770
Query 164801 ATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATTGTAGGTA 164860
|||| |||||| |||| || |||||||| || |||| |||||| || | | || |
Sbjct 571771 ATCAATTGCTTGCTAAGATGGATGGTGTTGATCAGCTAAACAATATTCTAGTCATTGGAA 571830
Query 164861 TGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTAGAATTGA 164920
|||| || || |||||||||||||| || ||| | || ||||| |||| ||| ||
Sbjct 571831 TGACTAATAGAAGGGATTTAATTGATGAAGCATTACTTCGTCCTGGAAGATTTGAAGTGC 571890
Query 164921 AAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAATTTTA 164967
| | ||||| ||||| || | |||||||| | |||||||||
Sbjct 571891 AGGTTGAAATTCATTTACCTGATGAGGAAGGACGACACCAAATTTTA 571937
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595871791444800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |