Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10- 07] 28 sequences; 12,502,959 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq23 122 9e-23 >seq23 Length=1344041 Score = 122 bits (134), Expect = 9e-23 Identities = 350/527 (66%), Gaps = 16/527 (3%) Strand=Plus/Minus Query 21199 AACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGATTCCATAAAATCAAA 21258 |||||| || || || ||||| ||||| || |||| || ||| |||||| || || || Sbjct 978479 AACTCTCTTCTCAAAGAAATTAGTCTTACCAGCCAAGGAGATATTTTCCATGAAGTCGAA 978420 Query 21259 TGGATTT-TCAGATTTAAATATTTTATTACAACCCAGTTCTGATAAT-AATCTATCTGCT 21316 ||||||| | | || || | || | || |||| | | ||||| || || || || Sbjct 978419 TGGATTTGTGACGTTGTAA-ACCTTCTCGCATCCCAATGC-GATAAGCAACCTGTCGGC- 978363 Query 21317 ACA-AATTCTATATATTGACACATTAATTCACAATTCATACCGATCAATTTTACAGGAAG 21375 ||| || || | || ||| ||| | || | |||||||||| || || ||||| Sbjct 978362 ACAGAACTCAACGTACTGAGCCATCATATCGAAGTTCATACCGAGTAAAGAAACTGGAAG 978303 Query 21376 AGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAA-CA--ATTATATTTATTAT 21432 ||| | | || | |||| ||| || ||| || || || || ||| | || || || Sbjct 978302 AGCGTCTCTCCAGAAAGTTTTCTCAATATTAACAGCCTCGGTCATGATTCTCTTGATAAT 978243 Query 21433 --CCTAGATGTACTAGGGGGATACAATAATTGTTTAAACATCAAACATGCAAAATCACAA 21490 ||| |||| || |||| | || || |||| | ||||||||||| | Sbjct 978242 GACCT-----TACTTGGTGGATGCTTCAAGTGAGAGAACAAAAGGCATGCAAAATCGGTA 978188 Query 21491 TGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCCT 21550 || | ||| ||||| || | || | || ||||| || || | || ||||| || ||| Sbjct 978187 TGTAGACCCTCATCTCTGCAGATAAGCTCGTTAGAGAACGTAAGGCCTGGCATCAAACCT 978128 Query 21551 CTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCTCAACGGCA 21610 ||||| || ||||| || || || ||||| | ||| || || || | || |||| |||| Sbjct 978127 CTCTTCTTCAACCAGAAGATGGAGGCAAACGATCCAGAGAAAAACACACCTTCAATGGCA 978068 Query 21611 GCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATCCAATATCCATTTTTCTGCC 21670 ||||| ||||| |||| ||| | || || || | || ||||||| | ||| Sbjct 978067 GCAAAAGCAACCAATCTCTCAGCATACAAAGCATCATCATTGTTTATCCATCTCAAAGCC 978008 Query 21671 CATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGCTTTTAA 21717 ||| ||||| || |||||| |||||||| || || || || Sbjct 978007 CATAAAGCCTTCTCCTTAATAGGTGGAATTGTATGGATGGCATTGAA 977961 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531900613834720