Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10-
07] 28 sequences; 12,502,959 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq23 122 9e-23
>seq23
Length=1344041
Score = 122 bits (134), Expect = 9e-23
Identities = 350/527 (66%), Gaps = 16/527 (3%)
Strand=Plus/Minus
Query 21199 AACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGATTCCATAAAATCAAA 21258
|||||| || || || ||||| ||||| || |||| || ||| |||||| || || ||
Sbjct 978479 AACTCTCTTCTCAAAGAAATTAGTCTTACCAGCCAAGGAGATATTTTCCATGAAGTCGAA 978420
Query 21259 TGGATTT-TCAGATTTAAATATTTTATTACAACCCAGTTCTGATAAT-AATCTATCTGCT 21316
||||||| | | || || | || | || |||| | | ||||| || || || ||
Sbjct 978419 TGGATTTGTGACGTTGTAA-ACCTTCTCGCATCCCAATGC-GATAAGCAACCTGTCGGC- 978363
Query 21317 ACA-AATTCTATATATTGACACATTAATTCACAATTCATACCGATCAATTTTACAGGAAG 21375
||| || || | || ||| ||| | || | |||||||||| || || |||||
Sbjct 978362 ACAGAACTCAACGTACTGAGCCATCATATCGAAGTTCATACCGAGTAAAGAAACTGGAAG 978303
Query 21376 AGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAA-CA--ATTATATTTATTAT 21432
||| | | || | |||| ||| || ||| || || || || ||| | || || ||
Sbjct 978302 AGCGTCTCTCCAGAAAGTTTTCTCAATATTAACAGCCTCGGTCATGATTCTCTTGATAAT 978243
Query 21433 --CCTAGATGTACTAGGGGGATACAATAATTGTTTAAACATCAAACATGCAAAATCACAA 21490
||| |||| || |||| | || || |||| | ||||||||||| |
Sbjct 978242 GACCT-----TACTTGGTGGATGCTTCAAGTGAGAGAACAAAAGGCATGCAAAATCGGTA 978188
Query 21491 TGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCCT 21550
|| | ||| ||||| || | || | || ||||| || || | || ||||| || |||
Sbjct 978187 TGTAGACCCTCATCTCTGCAGATAAGCTCGTTAGAGAACGTAAGGCCTGGCATCAAACCT 978128
Query 21551 CTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCTCAACGGCA 21610
||||| || ||||| || || || ||||| | ||| || || || | || |||| ||||
Sbjct 978127 CTCTTCTTCAACCAGAAGATGGAGGCAAACGATCCAGAGAAAAACACACCTTCAATGGCA 978068
Query 21611 GCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATCCAATATCCATTTTTCTGCC 21670
||||| ||||| |||| ||| | || || || | || ||||||| | |||
Sbjct 978067 GCAAAAGCAACCAATCTCTCAGCATACAAAGCATCATCATTGTTTATCCATCTCAAAGCC 978008
Query 21671 CATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGCTTTTAA 21717
||| ||||| || |||||| |||||||| || || || ||
Sbjct 978007 CATAAAGCCTTCTCCTTAATAGGTGGAATTGTATGGATGGCATTGAA 977961
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531900613834720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |