Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10-
07] 28 sequences; 12,502,959 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq12 347 2e-90
seq23 185 1e-41
>seq12
Length=1682134
Score = 347 bits (384), Expect = 2e-90
Identities = 1375/2135 (64%), Gaps = 55/2135 (3%)
Strand=Plus/Plus
Query 61995 GTGAATTGAATGG---GAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTT 62051
|||||||| |||| |||||| || || ||||||| |||||||| || |||||
Sbjct 1114853 GTGAATTGGATGGCACGAGCGGCAGCCTGT---GTACGTAAGTAGTACATACCTGTTTTC 1114909
Query 62052 AGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACTCGGATCTGC 62110
| || |||| || ||||| ||||| || | ||| ||| | | ||||
Sbjct 1114910 AAGCCCTTCTTCCAGCCATAAAAGTGCATGGAAGTCAATTTACCCATAGTTGGTGACTGC 1114969
Query 62111 TATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTT 62170
| |||||| |||||||||||| || |||| | || ||||| || |||||||| |
Sbjct 1114970 AA-ATGGATGTTCATAGATTGAGACTGGCAGATGTATGCGCCCCTATCAGCAGCCATATC 1115028
Query 62171 TATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTG 62229
|||| | ||| || | ||| ||||||| || | || |||| ||| || | || |
Sbjct 1115029 GATGACAGACTTCTGAGAAATCTCCCAAACTGTCCTGTACAACTT-CTTGATCTTATCGG 1115087
Query 62230 GAAGGTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCAT 62286
||| ||||| |||||||| || || || || || ||||| || |||
Sbjct 1115088 GAACGTTTGGCAAGTTCTGAATAGAACCGTTGTCGTGAATGATGAAGTTCTTCATTGCAT 1115147
Query 62287 CATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATT 62346
| ||||||| | | || | | | |||| | | | |||||||| | || ||||
Sbjct 1115148 CGTTCCATATTCCCATGTCAATAAGATCTCTCAACATGTAAGGATTAACGATCTGGAATT 1115207
Query 62347 CTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTAT 62406
| |||| | ||||| | || || ||| ||| | ||||| | | || ||||
Sbjct 1115208 CACCAGCAAGAACTCTTCTCTGATAGATGTTAGAGGTGAATGGTTCGAAACATTCGTTAT 1115267
Query 62407 TTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAA 62466
|||| ||| || | ||| || ||||||||||||||||||||||| | | |||||||
Sbjct 1115268 AACCCATAATCTGGGAAGTAGAAGCAGTCGGCATAGGTGCCACCAAAAGAGAGTTTCTAA 1115327
Query 62467 GACC-GTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACA 62525
|||| || | | || ||| | || |||| ||||| | ||| ||||||| ||
Sbjct 1115328 GACCAGTCTTGGCA-ATCTTAGCCTTCAGAGTATCCCAGTCCCACAGATCCGTAGGCTTT 1115386
Query 62526 ACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCG 62585
|||||||||||| || || || ||| ||||||| |
Sbjct 1115387 TTGTTCCACATATCATATTGTAGAATACCCTTTGAAGCTGGAGAGCCTTCATATGTCTGA 1115446
Query 62586 TATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTT 62645
|| | || || | | |||| || | |||| |||||| ||| ||| | |||
Sbjct 1115447 TAAGTACCCTCTTCCACAGCAAGCTGGTTGGATTCCTCCAATGCAGCGTGATACAAGGTC 1115506
Query 62646 TCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAG-AG 62704
|| || |||| | || || || |||| || | | ||||| || || | |||| |
Sbjct 1115507 TCAAATATCTGAATGTTAAGCTCCCGTGCATCTGGACAGTCAAAAGG-TAGTCTAAGCAT 1115565
Query 62705 AATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGA 62764
| || | || || | || || | ||||| | | |||||||| | |||| | || ||
Sbjct 1115566 GAAGAAGGTATCAGCAAGACCCTGGATACCAAGAGCAATAGGTCTGTTTCTCATGTTGGA 1115625
Query 62765 GATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTG-- 62822
| | || || |||| ||||| ||||| | || |||| || | || | |
Sbjct 1115626 GTTACGGGCCTCAGGAACTGGATAGTAATTTCTGTCAATAACACGGTTTAAGTTACGGGT 1115685
Query 62823 -ACAA--TTACT----TTGACCACATCCTTCAGTTTGAGAAAATCAA--ATCGCCCATCT 62873
|||| ||| | ||| || | || | |||| | | ||| ||| | |||||
Sbjct 1115686 AACAACTTTAGTAATCTTGTGCAACTTCTCGAAGTTGA-ACCAGCAATGATC-CTCATCT 1115743
Query 62874 ATTACAAACATGTTCAAGGCAACAGATG----CCAGATTACAAACGGCTACCTCATTAGC 62929
||| | | || | |||| ||| ||| ||||| || | ||||||| |
Sbjct 1115744 GACTCAACAAAGG-CAGGCAAACAAATGTTGGCCAAGTTACACACACCAACCTCATCTGG 1115802
Query 62930 ATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTG 62989
| | || | | | |||| ||| | || | | ||||| || || || || |
Sbjct 1115803 AGAGGAGTACTCGACAACCTCACAGCACAAGTTCGAAGATTTGATGGTACCCAAGTTCTT 1115862
Query 62990 TTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAAT 63049
|||||||||||| | ||||| |||||||| || | ||||| || ||||||||||| |
Sbjct 1115863 CTGATTACTCTTTCTATTACAAGCATCCTTGTAGATCATGAAAGGTGTACCAGTTTCTGT 1115922
Query 63050 CTGAGATTCTATAATCGCTTTCCAGA-CGACTCGAGCCTTTATTATAGAT-TTGTATCTC 63107
||||| || | |||| | ||| | | || ||||||| | | | | || | ||
Sbjct 1115923 CTGAGCCTCCAAAATCTGGTACCATAACTTCT-GAGCCTTCACTGTTCTTCTTCCACGTC 1115981
Query 63108 CTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAAT 63167
||| || | ||||| | || |||||| ||||||||||| || |||||| |
Sbjct 1115982 CTT-CTTTCTCGTAACGAGTGTACAATTTCTCGAACTCGTCACCGTAAACATCTGAGAGA 1116040
Query 63168 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 63227
|| || ||| ||| | | ||| | ||||| ||| || ||| || ||||||
Sbjct 1116041 CCTGGTGCCTCAGAAGGAGAGAACAATGTCCACTTGTCGTTGCTCTCCACACGCTTCATA 1116100
Query 63228 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCT 63287
|| | ||| ||||||||||||||| ||| | ||| | | | | ||||| || ||
Sbjct 1116101 AATAAATCTGGAATCCAAAGAGCTGGAAACAAATCACGTGCACGAATCTCCTCTTTACCA 1116160
Query 63288 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 63347
||||||| | | ||||| || | | ||||||| |||||| || |||||||| ||
Sbjct 1116161 TGATTCTTTCTGATATCGATAAAGTCGAAGATATCAGCATGCCAAGGCTCCAAGTAAATA 1116220
Query 63348 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 63407
|| || | || || | ||||| || || ||||| | |||||||| || | || |
Sbjct 1116221 GCAATGGCACCTGGTCTCTTGTTACCACCTTGATCCACATATCTAGCAGTACTGTTGAAC 1116280
Query 63408 ACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCA 63467
|| | | ||| ||||| |||||||| ||| ||||||| ||||||| ||||| |||
Sbjct 1116281 ACACGAACCATCGGAATTATACCGTTGGATGTACCATTAGTACCGGCAATATACGAACCA 1116340
Query 63468 CTGGCACGAATATTACTAAT-TGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGC 63526
||| |||||| || ||| ||| ||||| || || || || | ||||| || || ||
Sbjct 1116341 GTGGAACGAATGTTGTGAATGTGA-AGACCAATACCACCAGCAGTCTTAGAAATCAAAGC 1116399
Query 63527 GCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAA 63586
|| |||| || || || |||||||| || || ||||| |||| || || ||
Sbjct 1116400 ACACTGTTTCAAAGTATCGTAGATACCTTCAATAGAGTCATCTTTCATTGCAACTAAGAA 1116459
Query 63587 ACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGT 63646
|| ||||| || | || ||| || ||||| || || || || || || || ||
Sbjct 1116460 GCATGATGACATCTGAGGGCGTGGAGTACCAGCATTGAACAACGTTGGTGATGCATGTGT 1116519
Query 63647 AAACCATTTTTCAGAAAGTAGATTGTACG-TCTCAATAGCTGAGTCTATATCCCATTGAT 63705
|| || | | || | | | || | | ||| | || || ||||| ||
Sbjct 1116520 GAAGTATCTCTTTGACATCAAGTCATATGATTCCAACACCTTAG-GAATATCATCACCAT 1116578
Query 63706 GAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTA 63765
|||| || || || || | ||| | | ||| || ||||||||| | | ||| || |
Sbjct 1116579 GAATACCGACGGCCACTCTCATAAGAAGGTGTTGTGGTCTTTCAGCAACCTTACCATTAA 1116638
Query 63766 TTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTC 63825
|| |||||| || || ||||||||| || |||||||| |||||||| ||||| |
Sbjct 1116639 TTCTCAACAGATAAGAACGTTCCAAAGTCTTGAAACCAAAGTAGTTGTAACTGAAGTCAC 1116698
Query 63826 GTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAAC-----TATATCCAT 63880
| |||||| |||| | ||||| | | |||||||| | |||| |||| | |
Sbjct 1116699 GGTCGTAATTAATGGCTGAGTTCAACTCATCCTTATGCTCCATAACAATCTTATAAACCT 1116758
Query 63881 GGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAA 63940
| | ||||| || ||||| | ||| | || ||||| |||||| |||
Sbjct 1116759 CATCA-----GAAATCATAGGAGACTTCTTCTGGGTCTTTGGATTGTAGTAGTTGTATAG 1116813
Query 63941 ATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTAT 64000
|||||| || || ||| || | || || || | |||||| | |||||| | || |
Sbjct 1116814 ATCCTCTATAACATCAGAGAAAGGCTTCTTAGTCTGCTTGTGCAAATTTGAGATTGCAAG 1116873
Query 64001 TCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGT-GGCTGCTATTTCGG 64059
||| ||||| | | | ||||| || ||||| ||| || || || ||||| |||| |
Sbjct 1116874 TCTAGCGGCCAAAGTAGCATAGTCTGGATGCATTGTGGT-CATGTATGCTGCAGTTTCAG 1116932
Query 64060 CTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCA 64094
| | || | ||||||| || | || || || |||
Sbjct 1116933 CAGTCAAATTGTCCAACTCAATGGTGGTAACACCA 1116967
>seq23
Length=1344041
Score = 185 bits (204), Expect = 1e-41
Identities = 568/866 (66%), Gaps = 18/866 (2%)
Strand=Plus/Minus
Query 33034 TTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTG 33093
|| || || |||||||| || || |||| || |||||||||||||| || || |||||
Sbjct 978472 TTCTCAAAGAAATTAGTCTTACCAGCCAAGGAGATATTTTCCATGAAGTCGAATGGATTT 978413
Query 33094 GTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCCGCGACGAATTCT 33153
|| || || |||| || | |||||||| | || ||| || || || ||| ||
Sbjct 978412 GTGACGTTGTAAACCTTCTCGCATCCCAATGCGATAAGCAACCTGTCGGCACAGAACTCA 978353
Query 33154 ATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTA 33213
| || |||||| || | ||||| || | | |||||||||||| | |
Sbjct 978352 ACGTACTGAGCCATCATATCGAAGTTCATACCGAGTAAAGAAACTGGAAGAGCGTCTCTC 978293
Query 33214 -AGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGATCTAACGGTTTCTTCACT 33272
||||| | || | |||| || || || || || || | | | | | |||
Sbjct 978292 CAGAAAGTTTTCT-CAATATTAACAGCCTCGGTCATGATTCTCTTGATAATGACCTTACT 978234
Query 33273 CGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTC 33332
||||||||| || || |||| | ||||| |||||| || |||||||| ||
Sbjct 978233 TGGTGGATGCTTCAAGTGAGAGAACAAAAGGCATGCAAAATCGGTATGTAGACCCTCATC 978174
Query 33333 TCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCA 33392
||| | || || ||||| || ||||| || || ||||| | || | ||| || | |||
Sbjct 978173 TCTGCAGATAAGCTCGTTAGAGAACGTAAGGCCTGGCATCAAACCTCTCTTCTTCAACCA 978114
Query 33393 AAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAG 33452
|| ||||| || || |||||||| || || | ||||| | |||||||| |||| |
Sbjct 978113 GAAGATGGAGGCAAACGATCCAGAGAAAAACACACCTTCAATGGCAGCAAAAGCAACCAA 978054
Query 33453 TCTCTCTCCATAACCGGCGCTGTCATG---TATCCACTTTTGAGCCCAATCGGCCTTCTT 33509
|||||| |||| || |||| |||||| | |||||| |||||||
Sbjct 978053 TCTCTCAGCATACAAAGCATCATCATTGTTTATCCATCTCAAAGCCCATAAAGCCTTCTC 977994
Query 33510 TTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTT 33569
|| | | || || || | |||||||| || | |||| || || | || |
Sbjct 977993 CTTAATAGGTGGAATTGTATGGATGGCATTGAACAAGTAGTCGGACTCTTTCTTGTCAGT 977934
Query 33570 AACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTG 33629
| ||| || ||||||||||| ||| | || || || ||||| |||| |||||
Sbjct 977933 GATATAGGTCTCGATCAAAAGGGAATAAGTCTCAGAGTGGATGTTCTCAACCATAATCTG 977874
Query 33630 AAATCCGTAGAAACATCTAGCCTC-GGTAATCTGTACTTCTG-TACAAAATCGTTC--CG 33685
|| || ||||| ||| ||||| ||||| ||| || ||| | || || |||| |
Sbjct 977873 GAAACCATAGAAGGCTCTTGCCTCAGGTAA-CTGCAC--CTGCTTCATAA-AGTTCTGTG 977818
Query 33686 CCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAA 33745
||||||| |||| || || || || || ||||| || ||||| ||| | || |
Sbjct 977817 CCAAATTCTCATCGACAATACCATCTGAAGCGGCAAAGAAGGCCAAGACACGAGAGATGA 977758
Query 33746 AATATTTTTCGTCTGGTGTTAGT----TTATTCCAATCATTGATATCTTTAGATATATCT 33801
| ||| | || | ||| || | | |||||| || | | ||| || || | |||
Sbjct 977757 AGTATCTCTCAT-TGGCATTCATCTTGTCATTCCAGTCGGTCAAATCCTTTGAGAGATCG 977699
Query 33802 ACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTCCAGATGTCATAA 33861
| || || | ||||| || || ||||| ||||| || ||||| | ||| || ||||
Sbjct 977698 ATCTCCTCGGCAGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATTTGCCATATATCATCG 977639
Query 33862 TATTGGATTGGGAAAATAACAAATCT 33887
|| || || ||||| || || |||||
Sbjct 977638 TACTGAATAGGGAACATCACGAATCT 977613
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622946981968480
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