Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10- 07] 28 sequences; 12,502,959 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq4 147 3e-30 >seq4 Length=428324 Score = 147 bits (162), Expect = 3e-30 Identities = 204/284 (72%), Gaps = 4/284 (1%) Strand=Plus/Minus Query 137829 CGAGTCTTGGACAATGGCCACGTTTGGCTTGCCGTTTTGCACCGACATGATGCACTTGCT 137888 || ||| ||||||||| ||| | |||||| | ||| ||||| ||| | | | Sbjct 57125 CGTGTCCTGGACAATGCCCATGACCGGCTTGTTGGACTGCGGCGACACGATCTGCCT--T 57068 Query 137889 GGCGCAGCTCAGCTCT--TTCAGCTCGGCAATGGCCTCGTACGACTGCGGCACGTGAATG 137946 ||| | || ||| ||| | || ||| || | | ||||||||||||||| ||||| ||| Sbjct 57067 GGCACCGCACAGATCTCCTCCAACTCTGCCTTCGTCTCGTACGACTGCGGGACGTGCATG 57008 Query 137947 TTCATCTCGTCGCCGTCAAAGTCGCAGTTGAAGGGCTTCGTTATGGCCAGGTTGATTTTG 138006 ||||||||||| ||||| |||||| |||| ||||| |||| | | || |||||| || Sbjct 57007 TTCATCTCGTCACCGTCGAAGTCGGCGTTGTAGGGCGTCGTCACCGACAAGTTGATCCTG 56948 Query 138007 AGCGTCTTGACTGGTTTGATGACCACCTTAAAGGCCATCATGGACGCCTTGTGCAGCGTC 138066 | |||| || || | | |||||| | |||||| ||| |||||| |||| | Sbjct 56947 AACGTCGAGAACGGCATCACCCGCACCTTGTGGCACATCATCGACATCTTGTGAAGCGAC 56888 Query 138067 GGTTGCCGGTTGAGCAGCACGTAGTCGCCGTCCATCAGCTGCCG 138110 || |||| ||||| ||||| |||||||||||||| ||||| Sbjct 56887 GGCTGCCTGTTGAAAAGCACCGGGTCGCCGTCCATCAAGTGCCG 56844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611391786012800