Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10-
07] 28 sequences; 12,502,959 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq12 356 3e-93
seq23 192 7e-44
>seq12
Length=1682134
Score = 356 bits (394), Expect = 3e-93
Identities = 1382/2136 (65%), Gaps = 57/2136 (3%)
Strand=Plus/Plus
Query 61850 GTGAATTGAATGG---GAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTT 61906
|||||||| |||| |||||| || || ||||||| |||||||| || |||||
Sbjct 1114853 GTGAATTGGATGGCACGAGCGGCAGCCTGT---GTACGTAAGTAGTACATACCTGTTTTC 1114909
Query 61907 AGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACTCGGATCTGC 61965
| || |||| || ||||| ||||| || | ||| ||| | | ||||
Sbjct 1114910 AAGCCCTTCTTCCAGCCATAAAAGTGCATGGAAGTCAATTTACCCATAGTTGGTGACTGC 1114969
Query 61966 TATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTT 62025
| |||||| |||||||||||| || |||| | || ||||| || |||||||| |
Sbjct 1114970 AA-ATGGATGTTCATAGATTGAGACTGGCAGATGTATGCGCCCCTATCAGCAGCCATATC 1115028
Query 62026 TATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTG 62084
|| | | ||| || | ||| ||||||| || | || |||| ||| || | || |
Sbjct 1115029 GATGACAGACTTCTGAGAAATCTCCCAAACTGTCCTGTACAACTT-CTTGATCTTATCGG 1115087
Query 62085 GAAGGTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCAT 62141
||| ||||| |||||||| || || || || || ||||| || |||
Sbjct 1115088 GAACGTTTGGCAAGTTCTGAATAGAACCGTTGTCGTGAATGATGAAGTTCTTCATTGCAT 1115147
Query 62142 CATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATT 62201
| ||||||| | | || | | | |||| | | | |||||||| | || ||||
Sbjct 1115148 CGTTCCATATTCCCATGTCAATAAGATCTCTCAACATGTAAGGATTAACGATCTGGAATT 1115207
Query 62202 CTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTAT 62261
| |||| | ||||| | || || ||| ||| | ||||| | | | || ||||
Sbjct 1115208 CACCAGCAAGAACTCTTCTCTGATAGATGTTAGAGGTGAATGGTTCGAAACATTCGTTAT 1115267
Query 62262 TTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAA 62321
|||| ||| || | ||| || ||||||||||||||||||||||| | | |||||||
Sbjct 1115268 AACCCATAATCTGGGAAGTAGAAGCAGTCGGCATAGGTGCCACCAAAAGAGAGTTTCTAA 1115327
Query 62322 GACC-GTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACA 62380
|||| || | | || ||| | || |||| ||||| | ||| ||||||| ||
Sbjct 1115328 GACCAGTCTTGGCA-ATCTTAGCCTTCAGAGTATCCCAGTCCCACAGATCCGTAGGCTTT 1115386
Query 62381 ACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCG 62440
|||||||||||| || || || ||| ||||||| |
Sbjct 1115387 TTGTTCCACATATCATATTGTAGAATACCCTTTGAAGCTGGAGAGCCTTCATATGTCTGA 1115446
Query 62441 TATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTT 62500
|| | || || | | |||| || | |||| |||||| ||| ||| | |||
Sbjct 1115447 TAAGTACCCTCTTCCACAGCAAGCTGGTTGGATTCCTCCAATGCAGCGTGATACAAGGTC 1115506
Query 62501 TCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAATTTAAG-AG 62559
|| || |||| | || || || | || || | | ||||| || || | |||| |
Sbjct 1115507 TCAAATATCTGAATGTTAAGCTCCCGTGCATCTGGACAGTCAAAAGG-TAGTCTAAGCAT 1115565
Query 62560 AATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGA 62619
| || | || || | || || | ||||| | | |||||||| | |||| | || ||
Sbjct 1115566 GAAGAAGGTATCAGCAAGACCCTGGATACCAAGAGCAATAGGTCTGTTTCTCATGTTGGA 1115625
Query 62620 GATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTG-- 62677
| | || || |||| ||||| ||||| | || |||| || | || | |
Sbjct 1115626 GTTACGGGCCTCAGGAACTGGATAGTAATTTCTGTCAATAACACGGTTTAAGTTACGGGT 1115685
Query 62678 -ACAA--TTACT----TTGACCACATCCTTCAGTTTGAGAAAATCAA--ATCGCCCATCT 62728
|||| ||| | ||| || | || | |||| | | ||| ||| | |||||
Sbjct 1115686 AACAACTTTAGTAATCTTGTGCAACTTCTCGAAGTTGA-ACCAGCAATGATC-CTCATCT 1115743
Query 62729 -ATT--ACAAA--CATGTTCAATGCAACAGATG-CCAGATTACAAACGGCTACCTCATTA 62782
| | ||||| || | ||| ||| | || ||| ||||| || | |||||||
Sbjct 1115744 GACTCAACAAAGGCAGG--CAAA-CAAATGTTGGCCAAGTTACACACACCAACCTCATCT 1115800
Query 62783 GCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTT 62842
| | | || | | | |||| ||| | || | | |||||||| || || ||
Sbjct 1115801 GGAGAGGAGTACTCGACAACCTCACAGCACAAGTTCGAAGATTTGATGGTACCCAAGTTC 1115860
Query 62843 TGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCA 62902
| |||||||||||| | ||||| |||||||| || | ||||| || |||||||||||
Sbjct 1115861 TTCTGATTACTCTTTCTATTACAAGCATCCTTGTAGATCATGAAAGGTGTACCAGTTTCT 1115920
Query 62903 ATCTGAGATTCTATAATCGCTTTCCA-GACGACTCGAGCCTTTATTATAGAT-TTGTATC 62960
|||||| || | |||| | ||| || || ||||||| | | | | || |
Sbjct 1115921 GTCTGAGCCTCCAAAATCTGGTACCATAACTTCT-GAGCCTTCACTGTTCTTCTTCCACG 1115979
Query 62961 TCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCA 63020
|| |||| | ||||| | || |||||| ||||||||||| || |||||| |
Sbjct 1115980 TC-CTTCTTTCTCGTAACGAGTGTACAATTTCTCGAACTCGTCACCGTAAACATCTGAGA 1116038
Query 63021 GTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCA 63080
| || || ||| ||| | | ||| | ||||| ||| || ||| || ||||
Sbjct 1116039 GACCTGGTGCCTCAGAAGGAGAGAACAATGTCCACTTGTCGTTGCTCTCCACACGCTTCA 1116098
Query 63081 TAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTC 63140
|||| | ||| ||||||||||||||| ||| | ||| | | | | ||||| || |
Sbjct 1116099 TAAATAAATCTGGAATCCAAAGAGCTGGAAACAAATCACGTGCACGAATCTCCTCTTTAC 1116158
Query 63141 CTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATA 63200
| ||||||| | | ||||| || | | ||||||| |||||| || |||||||| |
Sbjct 1116159 CATGATTCTTTCTGATATCGATAAAGTCGAAGATATCAGCATGCCAAGGCTCCAAGTAAA 1116218
Query 63201 TGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTAT 63260
| || || | || || | ||||| || || ||||| | |||||||| || | ||
Sbjct 1116219 TAGCAATGGCACCTGGTCTCTTGTTACCACCTTGATCCACATATCTAGCAGTACTGTTGA 1116278
Query 63261 AAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTC 63320
| || | | ||| ||||| ||||| |||||||||||||| || || | ||||| |
Sbjct 1116279 ACACACGAACCATCGGAATTATACCGTTGGATGTACCATTAGTACCGGCAATATACGAAC 1116338
Query 63321 CACTGGCACGAATATTACTAAT-TGATAGACCTATTCCCCCTGCCATTTTAGAGATTAAT 63379
|| ||| |||||| || ||| ||| ||||| || || || || | ||||| || ||
Sbjct 1116339 CAGTGGAACGAATGTTGTGAATGTGA-AGACCAATACCACCAGCAGTCTTAGAAATCAAA 1116397
Query 63380 GCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGA 63439
|| || |||| || ||||| ||||| || || ||| ||||| |||| || ||
Sbjct 1116398 GCACACTGTTTCAAAGTATCGTAGATACCTTCAATAGAGTCATCTTTCATTGCAACTAAG 1116457
Query 63440 AAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGA 63499
|| || ||||| || | || ||| || ||||| || || || || || || ||
Sbjct 1116458 AAGCATGATGACATCTGAGGGCGTGGAGTACCAGCATTGAACAACGTTGGTGATGCATGT 1116517
Query 63500 GTAAACCATTTTTCAGAAAGTAGATTGTACG-TCTCAATAGCTGAGTCTATATCCCATTG 63558
|| || || | | || | | | || | | ||| | || || |||||
Sbjct 1116518 GTGAAGTATCTCTTTGACATCAAGTCATATGATTCCAACACCTTAG-GAATATCATCACC 1116576
Query 63559 ATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTT 63618
|||||| || || || || | ||| | | ||| || ||||||||| | | ||| ||
Sbjct 1116577 ATGAATACCGACGGCCACTCTCATAAGAAGGTGTTGTGGTCTTTCAGCAACCTTACCATT 1116636
Query 63619 TATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 63678
||| |||||| || || ||||||||| || |||||||| |||||||| |||||
Sbjct 1116637 AATTCTCAACAGATAAGAACGTTCCAAAGTCTTGAAACCAAAGTAGTTGTAACTGAAGTC 1116696
Query 63679 TCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGT 63738
|| |||||| |||| | ||||| | | |||||||| | |||| ||| | |
Sbjct 1116697 ACGGTCGTAATTAATGGCTGAGTTCAACTCATCCTTATGCTCCATAAC--AATC--TTAT 1116752
Query 63739 AATACT----TGAAATAATAGGAAAATGTTTCCCATTTTTAGGATTGACATAGTTGAATA 63794
|| || ||||| |||||| | | ||| | || |||||| |||||| |||
Sbjct 1116753 AAACCTCATCAGAAATCATAGGAGACTTCTTCTGGGTCTTTGGATTGTAGTAGTTGTATA 1116812
Query 63795 AATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTA 63854
|||||| || || ||| || | || || || | ||||| | |||||| | || |
Sbjct 1116813 GATCCTCTATAACATCAGAGAAAGGCTTCTTAGTCTGCTTGTGCAAATTTGAGATTGCAA 1116872
Query 63855 TTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGT-GGCTGCTATTTCG 63913
||||||||| | | | ||||| || ||||| ||| || || || ||||| ||||
Sbjct 1116873 GTCTAGCGGCCAAAGTAGCATAGTCTGGATGCATTGTGGT-CATGTATGCTGCAGTTTCA 1116931
Query 63914 GCTGCCAGAGTGTCCAATTCTACCGTTGTTACACCA 63949
|| | || | ||||||| || | || || ||||||
Sbjct 1116932 GCAGTCAAATTGTCCAACTCAATGGTGGTAACACCA 1116967
>seq23
Length=1344041
Score = 192 bits (212), Expect = 7e-44
Identities = 574/868 (66%), Gaps = 22/868 (3%)
Strand=Plus/Minus
Query 32391 TTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTG 32450
|| || || |||||||| ||||| | || || |||||||||||||| |||||||||||
Sbjct 978472 TTCTCAAAGAAATTAGTCTTACCAGCCAAGGAGATATTTTCCATGAAGTCGAATGGATTT 978413
Query 32451 GTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCTGCGACA-AATTC 32509
|| || || |||| || | |||||||| | || ||| || || || ||| || ||
Sbjct 978412 GTGACGTTGTAAACCTTCTCGCATCCCAATGCGATAAGCAACCTGTCGGC-ACAGAACTC 978354
Query 32510 TATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGT 32569
| || |||||| || | ||||| || | | |||||||||||| | |
Sbjct 978353 AACGTACTGAGCCATCATATCGAAGTTCATACCGAGTAAAGAAACTGGAAGAGCGTCTCT 978294
Query 32570 A-AGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGATCTTACTGTTT-CTTCA 32627
||||| | || | ||||| || || || || || || |||| | | | | |
Sbjct 978293 CCAGAAAGTTTTCT-CAATATTAACAGCCTCGGTCATGATTC-TCTTGATAATGACCTTA 978236
Query 32628 CTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCG 32687
|| ||||||| | || || |||| | ||||| |||||| |||||||||||
Sbjct 978235 CTTGGTGGATGCTTCAAGTGAGAGAACAAAAGGCATGCAAAATCGGTATGTAGACCCTCA 978176
Query 32688 TCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGC 32747
||||| | || | ||||| || ||||| || || ||||| | || | ||| || | |
Sbjct 978175 TCTCTGCAGATAAGCTCGTTAGAGAACGTAAGGCCTGGCATCAAACCTCTCTTCTTCAAC 978116
Query 32748 CAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATA 32807
|| || ||||| ||||| |||||||| || || | ||||| | || ||||| ||||
Sbjct 978115 CAGAAGATGGAGGCAAACGATCCAGAGAAAAACACACCTTCAATGGCAGCAAAAGCAACC 978056
Query 32808 AGTCTCTCTCCATAACCGGCGCTGTCA---TGTATCCACTTTTGAGCCCAATCGGCCTTC 32864
| |||||| |||| || ||| | |||||| | |||||| ||||||
Sbjct 978055 AATCTCTCAGCATACAAAGCATCATCATTGTTTATCCATCTCAAAGCCCATAAAGCCTTC 977996
Query 32865 TTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCT 32924
| || | | || ||||| | || ||||| || | |||| || || | ||
Sbjct 977995 TCCTTAATAGGTGGAATTGTATGGATGGCATTGAACAAGTAGTCGGACTCTTTCTTGTCA 977936
Query 32925 TTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATT 32984
| | ||| || || |||||||| ||| | || || || ||||| |||| ||
Sbjct 977935 GTGATATAGGTCTCGATCAAAAGGGAATAAGTCTCAGAGTGGATGTTCTCAACCATAATC 977876
Query 32985 TGAAATCCGTAGAAGCATCTAGCCTC-GGTAATCTGTACTTCTG-TACAAAATCGTTC-- 33040
|| || || |||||| ||| ||||| ||||| ||| || ||| | || || ||||
Sbjct 977875 TGGAAACCATAGAAGGCTCTTGCCTCAGGTAA-CTGCAC--CTGCTTCATAA-AGTTCTG 977820
Query 33041 TGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTAT 33100
||| ||||| |||| || || || || || ||||| || ||||| ||| | ||
Sbjct 977819 TGCCAAATTCTCATCGACAATACCATCTGAAGCGGCAAAGAAGGCCAAGACACGAGAGAT 977760
Query 33101 AAAATATTTTTCGTCTGGTGTTAGT----TTATTCCAATCATTGATATCTTTAGATATAT 33156
|| ||| | || | ||| || | | |||||| || | | ||| || || | ||
Sbjct 977759 GAAGTATCTCTCAT-TGGCATTCATCTTGTCATTCCAGTCGGTCAAATCCTTTGAGAGAT 977701
Query 33157 CCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCAT 33216
| | || || | ||||| || || ||||| ||||| || ||||| | ||| || ||||
Sbjct 977700 CGATCTCCTCGGCAGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATTTGCCATATATCAT 977641
Query 33217 GATATTGAATTGGAAAAATAACAAATCT 33244
|| ||||| || || || || |||||
Sbjct 977640 CGTACTGAATAGGGAACATCACGAATCT 977613
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633631778228800
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