Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10- 07] 28 sequences; 12,502,959 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq1 114 9e-21 seq12 93.3 3e-14 >seq1 Length=1824870 Score = 114 bits (126), Expect = 9e-21 Identities = 166/233 (71%), Gaps = 6/233 (3%) Strand=Plus/Plus Query 21831 AAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCC 21890 ||||||||||| || |||| || || ||||| || || || ||| |||| ||| | Sbjct 737923 AAAATGCAAATTTTCGTTAAGACCTTGACGGGTAAGACTATCACCTTGGAGGTGGAGTCT 737982 Query 21891 GCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGG---TGTACCTGTA 21947 | || || | | | || | |||||||| || ||||| ||||| | ||||| Sbjct 737983 TCCGATACCATTGACAATGTCAAGCAAAAGATCCAGGATAAGGAGGGAATTCCACCTG-- 738040 Query 21948 AACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGAT 22007 | ||||||||| | ||||||||||| || || | || ||| | |||| || | || Sbjct 738041 -ATCAACAGAGATTGATCTTTGCTGGTAAGCAGTTGGAGGATGGTAGAACTTTGTCTGAC 738099 Query 22008 TACAATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 ||||| ||||||||||||||||||||||| |||| || | || ||||||| Sbjct 738100 TACAACATTCAGAAGGAATCTACTCTTCACTTGGTCTTGAGATTGAGAGGAGG 738152 >seq12 Length=1682134 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 21830 CAAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGC 21889 |||||||||||| || |||| || || || || || || || ||| |||| ||| | Sbjct 1446029 CAAAATGCAAATTTTCGTTAAGACTTTGACCGGTAAGACTATCACCTTGGAGGTGGAGTC 1445970 Query 21890 CGCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAA 21949 | || || | | | || | |||||||| || || || ||||| | || | | Sbjct 1445969 TTCCGACACCATTGACAATGTCAAGCAAAAGATCCAAGACAAGGAGGGAATCCCACCAGA 1445910 Query 21950 CCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTA 22009 || |||||| | ||||||||||| || || | || ||| | |||| || | || || Sbjct 1445909 TCAGCAGAGATTGATCTTTGCTGGTAAGCAGTTGGAGGATGGCAGAACTTTGTCGGACTA 1445850 Query 22010 CAATATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 ||| || |||||||| ||||||||||| |||| || Sbjct 1445849 CAACATCCAGAAGGAGTCTACTCTTCACTTGGTCTT 1445814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358124677789912