Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10- 07] 28 sequences; 12,502,959 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq23 138 2e-27 >seq23 Length=1344041 Score = 138 bits (152), Expect = 2e-27 Identities = 370/561 (66%), Gaps = 5/561 (1%) Strand=Plus/Plus Query 42309 ATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGAC 42368 |||||||||||||| || ||| |||||| ||||||||||| || || | ||||| Sbjct 977655 ATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCCGAGGAGATCGATCTCTCAAAGGAT 977714 Query 42369 ACGGCCGGCTGGGA-GTCAC--TGTCTGAGAACGAAAAGTTTTTCCTCAAAAACATACTG 42425 | ||| |||| | | || || || || || | | ||| || | || Sbjct 977715 TTGACCGACTGGAATGACAAGATGAATGCCAATGAGAGATACTTCATCTCTCGTGTCTTG 977774 Query 42426 GCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGAAA 42485 |||||||| ||||| || || || || ||| ||||||| |||| | || ||||| Sbjct 977775 GCCTTCTTTGCCGCTTCAGATGGTATTGTCGATGAGAATTTGGCACAGAACTTTATGAAG 977834 Query 42486 GAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACGTG 42545 ||||||||| |||||| | |||||| || |||||||| | |||||| | Sbjct 977835 CAGGTGCAGTTACCTGAGGCAAGAGCCTTCTATGGTTTCCAGATTATGGTTGAGAACATC 977894 Query 42546 CACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCGTAAC 42605 ||||||||| || || || || | || || ||| || ||| || Sbjct 977895 CACTCTGAGACTTATTCCCTTTTGATCGAGACCTATATCACTGACAAGAAAGAGTCCGAC 977954 Query 42606 GGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTC 42665 ||||||| ||||| | || || || || ||| ||||||| ||||| | Sbjct 977955 TACTTGTTCAATGCCATCCATACAATTCCACCTATTAAGGAGAAGGCTTTATGGGCTTTG 978014 Query 42666 AACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTC 42725 | ||||| | | | || || || | ||||| |||| || ||| | ||| | Sbjct 978015 AGATGGATAAACAATGATGATGCTTTGTATGCTGAGAGATTGGTTGCTTTTGCTGCCATT 978074 Query 42726 GAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGA-AGGTGTC 42784 || || | || ||||| || | || ||||||||||||||| | ||| ||| |||| | Sbjct 978075 GAAGGTGTGTTTTTCTCTGGATCGTTTGCCTCCATCTTCTGGTTGAAGAAGAGAGGT-TT 978133 Query 42785 GATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGA 42844 |||||| || || || ||||| ||||| || ||| |||| || ||||| || |||| || Sbjct 978134 GATGCCAGGCCTTACGTTCTCTAACGAGCTTATCTGCAGAGATGAGGGTCTACATACCGA 978193 Query 42845 CTTTGCCTGCCTCCTGTTCTC 42865 ||||| ||||| ||||||| Sbjct 978194 TTTTGCATGCCTTTTGTTCTC 978214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944338869481280