Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10- 07] 28 sequences; 12,502,959 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq1 86.0 1e-11 >seq1 Length=1824870 Score = 86.0 bits (94), Expect = 1e-11 Identities = 137/194 (71%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || || || || ||||| | | || | || || || || || || || || || Sbjct 738117 TTCCTTCTGAATGTTGTAGTCAGACAAAGTTCTACCATCCTCCAACTGCTTACCAGCAAA 738058 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGT 288400 ||||| | ||||||| | ||| ||||| || ||||||||||| ||| || || || | Sbjct 738057 GATCAATCTCTGTTGATCAGGTGGAATTCCCTCCTTATCCTGGATCTTTTGC-TTGACAT 737999 Query 288401 TTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGA 288460 | || || | |||| || || || || | ||||| ||||| || |||| ||||| | Sbjct 737998 TGTCAATGGTATCGGAAGACTCCACCTCCAAGGTGATAGTCTTACCCGTCAAGGTCTTAA 737939 Query 288461 CGAATATCTGCATT 288474 |||| || |||||| Sbjct 737938 CGAAAATTTGCATT 737925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179653976798984