Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10- 07] 28 sequences; 12,502,959 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq12 179 4e-40 seq25 87.8 2e-12 >seq12 Length=1682134 Score = 179 bits (198), Expect = 4e-40 Identities = 892/1404 (64%), Gaps = 21/1404 (1%) Strand=Plus/Plus Query 113935 TCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGC 113994 |||| ||||||| || | ||| |||| || || || || || | ||||| || |||| Sbjct 1115224 TCTCTGATAGATGTTAGAGGTGAATGGTTCGAAACATTCGTTATAACCCATAATCTGGGA 1115283 Query 113995 GGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAAT 114054 || || || || ||||| ||||||| | ||| ||| | ||||| | | ||| Sbjct 1115284 AGTAGAAGCAGTCGGCATAGGTGCCACCAAAAGAGAGTTTCTAAGACCAGTCTTGGCAAT 1115343 Query 114055 GCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAA 114114 |||| || | |||||||| | | | | || | |||||||||| | Sbjct 1115344 CTTAGCCTTCAGAGTATCCCAGTCCCACAGATCCGTAGGCTTTTTGTTCCACATATCATA 1115403 Query 114115 CTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTC 114174 || || ||||| | || ||||| || || ||| |||||| || | ||||| || | Sbjct 1115404 TTGTAGAATACCCTTTGAAGCTGGAGAGCCTTCATATGTCTGATAAGTACCCTCTTCCAC 1115463 Query 114175 CGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATT 114234 || | | | | |||| | || |||||||||| |||||||| || || || Sbjct 1115464 AGCAAGCTGGTTGGATTCCTCCAATGCAGCGTGATACAAGGTCTCAAATATCTGAATGTT 1115523 Query 114235 CATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAG 114294 | || || || | ||||| | |||| || | || ||| || || Sbjct 1115524 AAGCTCCCGTGCATCTGGACAGTCAAAAGGTAGTCTAAGCATGAAGAAGGTATCAGCAAG 1115583 Query 114295 ACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC-- 114352 ||| |||| ||| || |||| || | | |||||| || || || || || ||| Sbjct 1115584 ACCCTGGATACCAAGAGCAATAGGTCTGTTTCTCATGTTGGAGTTACGGGC---CTCAGG 1115640 Query 114353 -ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGAT 114411 || ||||| |||| || || ||||| | |||| || ||| ||||| || || || Sbjct 1115641 AACTGGATAGTAATTTCTGTCAATAACACGGTTTAAGTTACGGGTAACAACTTTAGTAAT 1115700 Query 114412 TTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCAT-TGACATA-CTTAGGAAGG 114469 | || | ||| ||| | | || | || | || |||| |||| | | ||| ||| Sbjct 1115701 CTTGTGCAACTTCTCGAAGTTGAACCAGCAATGATCCTCATCTGACTCAACAAAGGCAGG 1115760 Query 114470 G---CGATTGACG-CCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAAT 114525 | | || | ||| ||||||||| |||||| | | |||||| | || Sbjct 1115761 CAAACAAATGTTGGCCAAGTTACACACACCAACCTCATCTGGAGAGGAGTACTCGACAAC 1115820 Query 114526 TTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTT 114585 || ||||| || ||| || ||||| ||||||||||| ||||| |||| | || Sbjct 1115821 CTCACAGCACAAGTTCGAAGATTTGATGGTACCCAAGTTCTTCTGATTACTCTTTCTATT 1115880 Query 114586 ACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGC 114645 ||| ||||||||||| | |||| | || || || || || || || | || | ||| Sbjct 1115881 ACAAGCATCCTTGTAGATCATGAAAGGTGTACCAGTTTCTGTCTGAGCCTCCAAAATCTG 1115940 Query 114646 CTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTG 114704 | ||| | | || | | || ||| || | | || || || | |||||| | Sbjct 1115941 GTACCATAACTTCTGAGCCTT-CACTGTTCTTCTTCCACGTCCTTCTTTCTCGTAACGAG 1115999 Query 114705 TGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGC 114764 |||| | || ||||| ||||| | |||||||| |||||||||| | || Sbjct 1116000 TGTACAATTTCTCGAACTCGTCACCGTAAACATCTGAGAGACCTGGTGCCTCAGAAGGAG 1116059 Query 114765 AGAAGAGAGACCA-TTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAG 114823 |||| | | ||| ||| | ||| || ||||||||||| || | ||||| ||||| Sbjct 1116060 AGAACAATGTCCACTTGTCGTTGCTC-TCCACACGCTTCATAAATAAATCTGGAATCCAA 1116118 Query 114824 AGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCC 114883 ||||||| || | ||| || ||| || || | || ||||| | | || Sbjct 1116119 AGAGCTGGAAACAAATCACGTGCACGAATCTCCTCTTTACCATGATTCTTTCTGATATCG 1116178 Query 114884 AAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACCCCTTACG 114942 | |||||| | |||||| || ||||| || |||| ||| | || || | ||| | Sbjct 1116179 ATAAAGTCGAAGATATCAGCATGCCAAGGCTCCAAGTAAATAGCAATGGCACCTGGTCTC 1116238 Query 114943 ACG--ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATG 115000 | |||| | || | ||||| || || || || || || |||| ||| ||||| Sbjct 1116239 TTGTTACCACCTTGATCCACATATCTAGCAGTACTGTTGAACACACGAACCATCGGAATT 1116298 Query 115001 ATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCATGG 115060 ||||| | ||| ||||| || || |||| || | ||| | | | || Sbjct 1116299 ATACCGTTGGATGTACCATTAGTACCGGCAATATACGAACCAGTGGAACGAATGTTGTGA 1116358 Query 115061 ATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCG 115120 ||||| | ||||||||| || || ||| || || || |||| | | | | || Sbjct 1116359 ATGTGAAGACCAATACCACCAGCAGTCTTAGAAATCAAAGCACACTGTTTCAAAGTATCG 1116418 Query 115121 TAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGC 115180 ||||| || || || |||||| | || |||| | | |||||| ||||| || || Sbjct 1116419 TAGATACCTTCAATAGAGTCATCTTTCATTGCAACTAAGAAGCATGATGACATCTGAGGG 1116478 Query 115181 CTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACAT 115239 | ||| |||||||| ||||| | ||||||| || || |||| || || | ||||| Sbjct 1116479 CGTGGAGTACCAGCATTGAACAACGTTGGTGATGCATGTGTGAA-GTATCTCTTTGACAT 1116537 Query 115240 CTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCG 115299 | || || | ||||| || ||||| || || || |||||||||| | || | Sbjct 1116538 CAAGTCATATGATTCCAACACCTTAGGAATATCATCACCATGAATACCGACGGCCACTCT 1116597 Query 115300 CATAAACATGTATTGGGGTGTTTC 115323 ||||| | || ||| ||| |||| Sbjct 1116598 CATAAGAAGGTGTTGTGGTCTTTC 1116621 >seq25 Length=757050 Score = 87.8 bits (96), Expect = 2e-12 Identities = 117/163 (72%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 160712 GTGGCACCAAGATCTGGTCTCGCTGTGAAGAGTGGTATCCAAGTTGGTGCGGGTGTTGTG 160771 ||||||||||||||||| | || |||||| |||||| || ||||| ||||| | Sbjct 282267 GTGGCACCAAGATCTGGATTAGCGGTGAAGCATGGTATTCATACCGGTGCTGGTGTCATT 282326 Query 160772 GATCCAGACTACACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGGCACACAGATTTC 160831 || ||||||||| ||| ||||| || || || |||||||| | | | | ||||||| Sbjct 282327 GACTCAGACTACAGAGGAGAAGTTAAGGTTGTACTCTTCAACTTCAGCGATAAAGATTTC 282386 Query 160832 CAAATCAAAAGGGGGGATCGCATCGCGCAACTCATCTTAGAGA 160874 || || ||| ||| | || || |||||||| | |||| Sbjct 282387 AGCATTAACGCGGGTGATAGAATTGCACAACTCATTCTTGAGA 282429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353390926240