Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10-
07] 28 sequences; 12,502,959 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq12 109 4e-19
seq1 109 4e-19
>seq12
Length=1682134
Score = 109 bits (120), Expect = 4e-19
Identities = 167/235 (71%), Gaps = 5/235 (2%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| |||||| || || || ||||| ||||| || || || |||||||| ||
Sbjct 1445799 CCACCTCTCAATCTCAAGACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCCGAC 1445858
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
| | |||| | || || || || || ||||| | ||||| | ||| || || |||
Sbjct 1445859 AAAGTTCTGCCATCCTCCAACTGCTTACCAGCAAAGATCAATCTCTGCTGATCTGGTGGG 1445918
Query 15070 ATTCCTTCCTTGTCACAAAT--TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127
||||| |||||||| || ||||||| ||| | || || || ||| | || |
Sbjct 1445919 ATTCCCTCCTTGTCTTGGATCTTTTGCTTG--ACATTGTCAATGGTGTCGGAAGACTCCA 1445976
Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGA 15182
| || ||||| || || ||||| |||| ||| || || ||||||||||| |||||
Sbjct 1445977 CCTCCAAGGTGATAGTCTTACCGGTCAAAGTCTTAACGAAAATTTGCAT-TTTGA 1446030
>seq1
Length=1824870
Score = 109 bits (120), Expect = 4e-19
Identities = 165/233 (71%), Gaps = 4/233 (2%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
|| |||| |||||| || || || ||||| ||||| || || || |||||||| ||
Sbjct 738152 CCTCCTCTCAATCTCAAGACCAAGTGAAGAGTAGATTCCTTCTGAATGTTGTAGTCAGAC 738093
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
| | |||| | || || || || || ||||| | ||||| | |||||| || ||||
Sbjct 738092 AAAGTTCTACCATCCTCCAACTGCTTACCAGCAAAGATCAATCTCTGTTGATCAGGTGGA 738033
Query 15070 ATTCCTTCCTTGTCACAAAT--TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127
||||| ||||| || || ||||||| ||| | || || |||||| | || |
Sbjct 738032 ATTCCCTCCTTATCCTGGATCTTTTGCTTG--ACATTGTCAATGGTATCGGAAGACTCCA 737975
Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTT 15180
| || ||||| || || ||||| |||| || || || ||||||||||| |||
Sbjct 737974 CCTCCAAGGTGATAGTCTTACCCGTCAAGGTCTTAACGAAAATTTGCATTTTT 737922
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357391878039980
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |