Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10- 07] 28 sequences; 12,502,959 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq12 109 4e-19 seq1 109 4e-19 >seq12 Length=1682134 Score = 109 bits (120), Expect = 4e-19 Identities = 167/235 (71%), Gaps = 5/235 (2%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| |||||| || || || ||||| ||||| || || || |||||||| || Sbjct 1445799 CCACCTCTCAATCTCAAGACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCCGAC 1445858 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 | | |||| | || || || || || ||||| | ||||| | ||| || || ||| Sbjct 1445859 AAAGTTCTGCCATCCTCCAACTGCTTACCAGCAAAGATCAATCTCTGCTGATCTGGTGGG 1445918 Query 15070 ATTCCTTCCTTGTCACAAAT--TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 ||||| |||||||| || ||||||| ||| | || || || ||| | || | Sbjct 1445919 ATTCCCTCCTTGTCTTGGATCTTTTGCTTG--ACATTGTCAATGGTGTCGGAAGACTCCA 1445976 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGA 15182 | || ||||| || || ||||| |||| ||| || || ||||||||||| ||||| Sbjct 1445977 CCTCCAAGGTGATAGTCTTACCGGTCAAAGTCTTAACGAAAATTTGCAT-TTTGA 1446030 >seq1 Length=1824870 Score = 109 bits (120), Expect = 4e-19 Identities = 165/233 (71%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || |||| |||||| || || || ||||| ||||| || || || |||||||| || Sbjct 738152 CCTCCTCTCAATCTCAAGACCAAGTGAAGAGTAGATTCCTTCTGAATGTTGTAGTCAGAC 738093 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 | | |||| | || || || || || ||||| | ||||| | |||||| || |||| Sbjct 738092 AAAGTTCTACCATCCTCCAACTGCTTACCAGCAAAGATCAATCTCTGTTGATCAGGTGGA 738033 Query 15070 ATTCCTTCCTTGTCACAAAT--TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 ||||| ||||| || || ||||||| ||| | || || |||||| | || | Sbjct 738032 ATTCCCTCCTTATCCTGGATCTTTTGCTTG--ACATTGTCAATGGTATCGGAAGACTCCA 737975 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTT 15180 | || ||||| || || ||||| |||| || || || ||||||||||| ||| Sbjct 737974 CCTCCAAGGTGATAGTCTTACCCGTCAAGGTCTTAACGAAAATTTGCATTTTT 737922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357391878039980