Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10- 07] 28 sequences; 12,502,959 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq12 212 8e-50 >seq12 Length=1682134 Score = 212 bits (234), Expect = 8e-50 Identities = 1159/1823 (64%), Gaps = 43/1823 (2%) Strand=Plus/Plus Query 115549 GCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGC 115608 |||| || || | ||||||||| || || || | |||| ||||||| |||| | ||| Sbjct 1114877 GCCTGTGTACGTAAGTAGTACATACCTGTTTTCAAGCCCTTCTTCCAGCCATAAAAGTGC 1114936 Query 115609 ATTGAGGACAACTTGGAGAGTGTTGG--ACTTTCCATGAAGAGGTTCATACTTTGGGATT 115666 || || | ||| || | ||||| ||| ||| || ||||||| ||| || | Sbjct 1114937 ATGGAAGTCAATTTACCCATAGTTGGTGACTGCAAATG--GATGTTCATAGATTGAGACT 1114994 Query 115667 GATCGATGAA-GCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCC 115725 | |||| | ||| |||| ||| || |||||||| || ||| |||| || ||| Sbjct 1114995 GGCAGATGTATGCG-CCCCTATCAGCAGCCATATCGATGACAGACTTCTGAGAAATCTCC 1115053 Query 115726 CACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAG 115785 || || || ||||| | ||||| || | ||| || | | | || || ||||| Sbjct 1115054 CAAACTGTCCTGTACAACTTCTTGATCTTATCGGGAACGTTTGGCAAGTTCTGAATAGAA 1115113 Query 115786 CCACCTGCCTTGACC-ATGAGATCCTTCAT---ATCCTTTGACCAGAGACCAATCTTCTT 115841 || || | ||| |||| | |||||| ||| || ||| | || || | | Sbjct 1115114 CCGT-TGTCGTGAATGATGAAGTTCTTCATTGCATCGTT---CCATATTCCCATGTCAAT 1115169 Query 115842 GAGATC-CTCCACGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCA 115900 ||||| ||| || | || ||| || | || ||||| || || | |||| Sbjct 1115170 AAGATCTCTCAAC-ATGTAAGGATTAACGATCTGGAATTCACCAGCAAGAACTCTTCTCT 1115228 Query 115901 GATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGG 115960 |||||||||| | ||| |||| || || || || || | ||||| || |||| || | Sbjct 1115229 GATAGATGTTAGAGGTGAATGGTTCGAAACATTCGTTATAACCCATAATCTGGGAAGTAG 1115288 Query 115961 AGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTT 116020 | || || ||||| ||||||| | ||| ||| | ||||| | ||| Sbjct 1115289 AAGCAGTCGGCATAGGTGCCACCAAAAGAGAGTTTCTAAGACCAGTCTTGGCAATCTTAG 1115348 Query 116021 CCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGA 116080 |||| || | |||||||| | | | | || | |||||||||| | || | Sbjct 1115349 CCTTCAGAGTATCCCAGTCCCACAGATCCGTAGGCTTTTTGTTCCACATATCATATTGTA 1115408 Query 116081 GGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCA 116140 | ||||| | || ||||| || || ||| |||||| ||| | ||||| || | || | Sbjct 1115409 GAATACCCTTTGAAGCTGGAGAGCCTTCATATGTCTGATAAGTACCCTCTTCCACAGCAA 1115468 Query 116141 ATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTG 116200 | | | |||| | || |||||||||| |||||||| || || || | Sbjct 1115469 GCTGGTTGGATTCCTCCAATGCAGCGTGATACAAGGTCTCAAATATCTGAATGTTAAGCT 1115528 Query 116201 CCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTT 116260 || || || | ||||| | || | || | || ||| || ||||| | Sbjct 1115529 CCCGTGCATCTGGACAGTCAAAAGGTAGTCTAAGCATGAAGAAGGTATCAGCAAGACCCT 1115588 Query 116261 GGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC---ACGG 116317 ||| ||| || |||| || | | |||||| || || || || || ||| || | Sbjct 1115589 GGATACCAAGAGCAATAGGTCTGTTTCTCATGTTGGAGTTACGGGC---CTCAGGAACTG 1115645 Query 116318 GATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCAT 116377 |||| |||| || || ||||| | |||| || ||| ||||| || || || | | Sbjct 1115646 GATAGTAATTTCTGTCAATAACACGGTTTAAGTTACGGGTAACAACTTTAGTAATCTTGT 1115705 Query 116378 GAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCAT-TGACATA-CTTAGGAAGGG---C 116432 | | ||| ||| | | || | || | || |||| |||| | | ||| ||| | Sbjct 1115706 GCAACTTCTCGAAGTTGAACCAGCAATGATCCTCATCTGACTCAACAAAGGCAGGCAAAC 1115765 Query 116433 GATTGACG-CCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCG 116491 | || | ||| ||||||||| |||||| | | |||||| | || || Sbjct 1115766 AAATGTTGGCCAAGTTACACACACCAACCTCATCTGGAGAGGAGTACTCGACAACCTCAC 1115825 Query 116492 TACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACG 116551 ||||| || ||| || ||||| ||||||||||| ||||| |||| | ||||| | Sbjct 1115826 AGCACAAGTTCGAAGATTTGATGGTACCCAAGTTCTTCTGATTACTCTTTCTATTACAAG 1115885 Query 116552 CATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCC 116611 |||||||||||| ||| | || || || || || || || | || | ||| | || Sbjct 1115886 CATCCTTGTAGATCATGAAAGGTGTACCAGTTTCTGTCTGAGCCTCCAAAATCTGGTACC 1115945 Query 116612 AT-ACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAG 116670 || || || | | || ||| || | | || || || | |||||| ||||| Sbjct 1115946 ATAACTTCTGAGCCT-TCACTGTTCTTCTTCCACGTCCTTCTTTCTCGTAACGAGTGTAC 1116004 Query 116671 AGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAG 116730 | ||| ||||| ||||| | | |||||||| |||||||||| | ||| |||| Sbjct 1116005 AATTTCTCGAACTCGTCACCGTAAACATCTGAGAGACCTGGTGCCTCAGAAGGAGAGAAC 1116064 Query 116731 AGAGACCA-TTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGC 116789 | | ||| ||| | || ||| || |||||||| || | ||||| ||||| || || Sbjct 1116065 AATGTCCACTTGTCGTTGCT-CTCCACACGCTTCATAAATAAATCTGGAATCCAAAGAGC 1116123 Query 116790 CGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAA 116849 | || | ||| || ||| || || | || ||||| | | || | ||| Sbjct 1116124 TGGAAACAAATCACGTGCACGAATCTCCTCTTTACCATGATTCTTTCTGATATCGATAAA 1116183 Query 116850 GTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCGAC---- 116905 ||| | |||||| || ||||| || |||| ||| | || | || | ||| | | Sbjct 1116184 GTCGAAGATATCAGCATGCCAAGGCTCCAAGTAAATAGC-AATGGCACCTGGTCTCTTGT 1116242 Query 116906 GACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATAC 116965 |||| | || | ||||| || || || ||| || || |||| ||| ||||| |||| Sbjct 1116243 TACCACCTTGATCCACATATCTAGCAGTACTGTTGAACACACGAACCATCGGAATTATAC 1116302 Query 116966 CATCAGATTGGCCATTTGTCCC--CCGAATACGAGACTTGTTGGCTCTGACATCGTGGAT 117023 | | ||| ||||| || || | |||||| || | ||| | | | ||| || Sbjct 1116303 CGTTGGATGTACCATTAGTACCGGCAATATACGA-ACCAG-TGGAACGAATGTTGTGAAT 1116360 Query 117024 GTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTA 117083 ||| | ||||||||| || || ||| || || || |||| | | | | |||| Sbjct 1116361 GTGAAGACCAATACCACCAGCAGTCTTAGAAATCAAAGCACACTGTTTCAAAGTATCGTA 1116420 Query 117084 GATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCT 117143 ||| || || || |||||| | || |||| | | |||||| ||||| || || | Sbjct 1116421 GATACCTTCAATAGAGTCATCTTTCATTGCAACTAAGAAGCATGATGACATCTGAGGGCG 1116480 Query 117144 TGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCT 117202 ||| |||||||| ||||| | ||||||| || || |||| || || | |||||| Sbjct 1116481 TGGAGTACCAGCATTGAACAACGTTGGTGATGCATGTGTGAA-GTATCTCTTTGACATCA 1116539 Query 117203 TATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCA 117262 || || | ||||| || ||||| || || || |||||||||| | || | || Sbjct 1116540 AGTCATATGATTCCAACACCTTAGGAATATCATCACCATGAATACCGACGGCCACTCTCA 1116599 Query 117263 TAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCT 117322 ||| | || ||| ||| |||| | |||||| | ||| || ||| | Sbjct 1116600 TAAGAAGGTGTTGTGGTCTTTCAGCAACCTTACCATTAATTCTCAACAGATAAGAACGTT 1116659 Query 117323 CCAAGGTCTTGAGACCAAAATAG 117345 |||| ||||||| |||||| ||| Sbjct 1116660 CCAAAGTCTTGAAACCAAAGTAG 1116682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506985272480