Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10-
07] 28 sequences; 12,502,959 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq1 205 4e-47
seq25 143 1e-28
seq12 131 7e-25
seq23 87.8 7e-12
seq3 87.8 7e-12
>seq1
Length=1824870
Score = 205 bits (226), Expect = 4e-47
Identities = 857/1328 (65%), Gaps = 56/1328 (4%)
Strand=Plus/Plus
Query 451191 AAGGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAG 451250
|||| ||||| | ||||| || | || || ||||| || || || | || || |
Sbjct 1567396 AAGGTAAGCCAAAGATTCAGGTTGAATACAAGGGTGAGACAAAGGTCTTCACACCAGAGG 1567455
Query 451251 AAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTC 451310
| || |||||||||||| | || ||||||| | || || || || | ||
Sbjct 1567456 AGATCTCATCTATGGTTTTGACAAAAATGAGAACCACCGCCGAGGCTTACTTGGGAGAGA 1567515
Query 451311 CAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAA 451370
|| | ||||| || |||| ||||| ||||| ||||||||| | || | || ||||
Sbjct 1567516 AGGTGAAGGATGCTGTGGTTACAGTTCCAGCTTACTTCAATGATTCCCAGAGACAGGCAA 1567575
Query 451371 CTAAAGATGCAGG-ACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACA 451429
| ||||||||||| ||| |||||||| | ||||| | |||| || ||||| |||||
Sbjct 1567576 CCAAAGATGCAGGTACA-ATTGCTGGCATGAATGTGATGAGAATCATCAATGAGCCTACT 1567634
Query 451430 GCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTA 451489
||||| ||| | || ||||| | ||| || | || | || || ||| | ||
Sbjct 1567635 GCAGCAGCTATTGCTTATGGTTTGAACAAAGAGAAGGGAAGTGGCGAGAAGAATGTCTTG 1567694
Query 451490 GTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTA 451549
| || ||||| ||||| || || |||| ||| | | || ||||| || || |
Sbjct 1567695 ATTTTCGATTTGGGTGGTGGTACCTTTGATGTTTCCCTTTTGTCTATTGATGAGGGTATC 1567754
Query 451550 TTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAATGCA 451609
||||| || ||||| || ||||||||||| | || ||||| || ||||||| ||
Sbjct 1567755 TTTGAGGTTAAGGCCACTGCCGGTGATACTCACTTGGGTGGTGAGGACTTTGATAA--CA 1567812
Query 451610 -ATTGTGGAAT--GGTTGAAAACTGATGTTCAA-CGAAA--ACTAAAAGTAGATATTTCT 451663
|||| | | ||| ||| || |||||| |||| || | ||| ||||| ||
Sbjct 1567813 GATTGGTTACTCACTTTGCCAAC-GA-GTTCAAGAGAAAGTACCATAAG--GATATGACT 1567868
Query 451664 ACTAACCAAAAAGCACTTAGACGTCTTAAAACATCAGCAGAAAAAGCTAAAATTACACTC 451723
||| || | ||| | ||| | | | ||| || |||| |||||| | ||| |
Sbjct 1567869 GGTAATCAGAGAGCTTTGAGAAGATTGAGAACTGCATGTGAAAGAGCTAAGAGAACATTG 1567928
Query 451724 AGTTCA---ACACAAACTACTAGTATAAACATTGATAGTTTAGTTGATGGAATGGA-TTA 451779
|||| |||| || || | | | || || ||| |||| || || || ||
Sbjct 1567929 TCTTCATCTGCACAGAC--CT-CTGTTGAGATCGACTCTTTGTTTGAGGGTATCGACTTC 1567985
Query 451780 TGCTACTACTCTTACCCGTGCTAAATTTGAATCAATTTGTTCCAGTATTTTTGCACGGGT 451839
| | || | |||| | || | |||||| |||| | ||| || | | || |
Sbjct 1567986 TAC-ACATCAATTACGAGGGCAAGATTTGAGGAGCTTTGCT-CAG-ATCTGTTCAGATCT 1568042
Query 451840 A--ATGAAACCTGTTGATCAAGTATTACATGATTCTAAAATTAGTAAAGATAAAATTGAT 451897
| || | ||||| || | || || |||||||| || || | || |||||
Sbjct 1568043 ACTCTGGACCCTGTCGAAAAGGTTTTGAGGGATTCTAAGCTTGACAAGGCAAAGATTGAC 1568102
Query 451898 GAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTTGTCTTCT 451957
|| ||||||||||| || ||||||||| ||||||| || |||| | || | |||
Sbjct 1568103 GAGATTGTGCTTGTTGGTGGTTCTACAAGAATTCCAAAGGTTCAGAAATTGGTTTCTGAC 1568162
Query 451958 TATTTT--------GGAGGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTG 452009
|| ||| |||| ||||| || || | || ||||||||||||||||
Sbjct 1568163 TACTTTAACGGTAAGGAGCCTAACAA--ATCTA------TCAACCCTGATGAAGCTGTTG 1568214
Query 452010 CATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCAGATGAT-----GAAAAATT 452064
| ||||||||||||||||| ||||||||| | || ||| || ||| ||| | |
Sbjct 1568215 CCTATGGTGCTGCAGTTCAGGCAGCTATTTTGACTGGT---GACGATTCCTCGAAGACTC 1568271
Query 452065 AGGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGG 452124
|||| | | || | | ||||| |||||| ||||| | || | || || ||||||||
Sbjct 1568272 AGGACTTGT--TGCTTTTGGATGTTACACCTTTATCTTTGGGTATCGAGACCGCTGGTGG 1568329
Query 452125 AATGATGACTAATTTAATTAAACGAGGAACT--TCTATTCCTTGTAAAAAGAGTCAAACA 452182
| ||||| || || ||| | || |||| |||| ||||| || ||| | |||
Sbjct 1568330 TGTTATGACAAAGTTGATT--CCAAGAAACTCCACTATCCCTTGCAAGAAGTCTGAAATC 1568387
Query 452183 TTTAGTACAGCAAGTGATAACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGT 452242
|| ||| |||||||| |||||||| ||||| |||| ||||| ||| |
Sbjct 1568388 TTCTCTACTTATGCCGATAACCAGCCAGGTGTGTTGATTCAGGTGTACGAAGGTGAAAGA 1568447
Query 452243 GCAATGACACGAGATAATAATAAACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATG 452302
||| || || || ||| | || | || | | || || ||
Sbjct 1568448 ACAAGAACCAAGGACAACAATTTGTTGGGTAAGTTCGAGTTGACTGGAATCCCACCAGCA 1568507
Query 452303 CCAAGGGGAACTCCTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAAT 452362
||||| || ||| || ||||| |||| | |||| | ||||||||||||||| | ||
Sbjct 1568508 CCAAGAGGGGTTCCACAGATTGAGGTTACTTTTGATATCGATGCAAATGGTATTTTGAAC 1568567
Query 452363 GTGAGTGCAGTTGAAAAATCATCTGGAAAATCAGAAAAAATTACAATTACTAATGATAAA 452422
|| ||| || || || |||| || || | || || || || || ||||| ||
Sbjct 1568568 GTTTCTGCCGTCGAGAAGGGTACTGGTAAGTCCCAGAAGATCACTATCACAAATGACAAG 1568627
Query 452423 AACCGTTTATCTAAAGAAGATATTGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGGAT 452482
| | || || || || || || || || ||||| ||| || || || |||||||
Sbjct 1568628 GGCAGATTGTCAAAGGAGGAGATCGATAAGATGGTTTCTGAGGCTGAGAAGTTCAAGGCC 1568687
Query 452483 GATGATGA 452490
|| |||||
Sbjct 1568688 GAGGATGA 1568695
Score = 147 bits (162), Expect = 9e-30
Identities = 173/234 (74%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 391041 TATATTATAATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTT 391100
|||| | |||| | ||||||||||| || |||| ||||| ||||| || | || ||
Sbjct 737917 TATAGAAAAATGCAAATTTTCGTTAAGACCTTGACGGGTAAGACTATCACCTTGGAGGTG 737976
Query 391101 GAATCATCTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCT 391160
|| || || |||| |||||| | | || ||||| || || |||||||| ||||||||
Sbjct 737977 GAGTCTTCCGATACCATTGACAATGTCAAGCAAAAGATCCAGGATAAGGAGGGAATTCCA 738036
Query 391161 CCTGATCAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCG 391220
||||||||||| | || || || | || || || | || ||||| ||||||||| |
Sbjct 738037 CCTGATCAACAGAGATTGATCTTTGCTGGTAAGCAGTTGGAGGATGGTAGAACTTTGTCT 738096
Query 391221 GATTATAATATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274
|| || || ||| | ||||| | || |||||||| || || ||| ||||||||
Sbjct 738097 GACTACAACATTCAGAAGGAATCTACTCTTCACTTGGTCTTGAGATTGAGAGGA 738150
>seq25
Length=757050
Score = 143 bits (158), Expect = 1e-28
Identities = 205/285 (72%), Gaps = 8/285 (3%)
Strand=Plus/Minus
Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372
|||||| |||| || |||||||||| || |||||||| ||||| || | |||||||||
Sbjct 742435 GTTACTCATGCTGTCGTTACTGTTCCTGCATATTTCAACGATGCCCAGAGACAAGCAACT 742376
Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432
|||||||| || ||||| || || || |||||| ||||| ||||||| ||||| ||
Sbjct 742375 AAAGATGCTGGTACGATTGCAGGCTTGAACGTTCTTAGAATTGTTAATGAGCCTACCGCT 742316
Query 451433 GCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAAC-AGAAGaaaaaaaTATTTTAGT 451491
|| ||| | || || || | ||| |||| | || || |||| |||| || ||
Sbjct 742315 GCCGCTATTGCCTACGG-TTTGGA----CAAAGGTGACGAGGAGAAGCAAATCATT--GT 742263
Query 451492 ATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATT 451551
| || || |||||||||||| |||| |||| | || || |||| || ||| | ||
Sbjct 742262 GTACGACTTGGGTGGAGGAACTTTTGATGTTTCTCTTCTGTCGATTGCAGGTGGTGCCTT 742203
Query 451552 TGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGA 451596
|||||| ||| || ||||| || ||| | || ||||| ||
Sbjct 742202 TGAAGTTTTGGCCACAGCAGGTGACACACATTTGGGTGGTGAGGA 742158
>seq12
Length=1682134
Score = 131 bits (144), Expect = 7e-25
Identities = 171/237 (72%), Gaps = 0/237 (0%)
Strand=Plus/Minus
Query 391037 ATATTATATTATAATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGA 391096
|||| ||| | |||| | ||||||||||| || |||| ||||| ||||| || | ||
Sbjct 1446038 ATATCTTATCAAAATGCAAATTTTCGTTAAGACTTTGACCGGTAAGACTATCACCTTGGA 1445979
Query 391097 TGTTGAATCATCTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAAT 391156
|| || || || || | |||||| | | || ||||| || ||||| ||||| |||||
Sbjct 1445978 GGTGGAGTCTTCCGACACCATTGACAATGTCAAGCAAAAGATCCAAGACAAGGAGGGAAT 1445919
Query 391157 TCCTCCTGATCAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTT 391216
|| || ||||| || | || || || | || || || | || ||||| ||||||||
Sbjct 1445918 CCCACCAGATCAGCAGAGATTGATCTTTGCTGGTAAGCAGTTGGAGGATGGCAGAACTTT 1445859
Query 391217 GGCGGATTATAATATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273
| |||| || || || | ||||| | || |||||||| || || ||| |||||||
Sbjct 1445858 GTCGGACTACAACATCCAGAAGGAGTCTACTCTTCACTTGGTCTTGAGATTGAGAGG 1445802
>seq23
Length=1344041
Score = 87.8 bits (96), Expect = 7e-12
Identities = 143/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 451250 GAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCT 451309
||||| ||||||||||| | | || ||||| || || || || | ||||||
Sbjct 826328 GAAATCTCATCTATGGTGTTGAACAAGATGAAGGAGACCGCTGAGGCCAAGATTGGTCAG 826269
Query 451310 CCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCA 451369
||| || | | || ||||||||||| ||||| ||||| ||||| || | || ||
Sbjct 826268 CCAATTGAGAAGTCTGTCATTACTGTTCCAGCTTACTTCAACGATGCTCAGAGACAGGCT 826209
Query 451370 ACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACA 451429
|| || ||||| || ||||||||| | || ||| | |||| ||||| || |||||
Sbjct 826208 ACCAAGGATGCTGGTGCCATTGCTGGTATGAACGTTTTGAGAATCATTAACGAGCCTACC 826149
Query 451430 GCAGCTGCTCTAGCATATGGACTAGG 451455
|| || ||| | || || || ||||
Sbjct 826148 GCCGCCGCTATTGCTTACGGTTTAGG 826123
>seq3
Length=519016
Score = 87.8 bits (96), Expect = 7e-12
Identities = 130/182 (71%), Gaps = 2/182 (1%)
Strand=Plus/Plus
Query 248826 ACATATGGTACTTGATAAAGTTCATTCCAGAAGTATGGGTCCTAGACAAGCTATTA-CTA 248884
||||||||| |||||| |||| ||||| | ||||| | || || ||| |||
Sbjct 54725 ACATATGGTGGATGATAAGATTCACGCCAGAGCCAGAGGTCC-ATACCAGAATTTAACTA 54783
Query 248885 GACAACCCATGGAAGGACGTTCTAAAGATGGAGGTCTTAAAATTGGAGAGATGGAAAAAG 248944
||||||| |||||||| ||| ||| |||||| ||| | | | | ||||||||||||| ||
Sbjct 54784 GACAACCTATGGAAGGTCGTGCTAGAGATGGTGGTTTGAGATTCGGAGAGATGGAAAGAG 54843
Query 248945 ATGCAATGGTTGCTCATGGAATAGGACAATTCTTAAAAGAACGAATGATGGAAAATTCTG 249004
| ||| |||| ||||| | | ||||| ||||| || | ||||| |||||
Sbjct 54844 ACTGTATGATTGCCCATGGTGTGGCCGGCTTCTTGAAAGAGAGATTAATGGATTCTTCTG 54903
Query 249005 AT 249006
||
Sbjct 54904 AT 54905
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975717691211024
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |