Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20anomalus_20[genbank_20GCA_5F001754015.1_202016-10- 07] 28 sequences; 12,502,959 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq12 255 7e-63 seq22 102 1e-16 >seq12 Length=1682134 Score = 255 bits (282), Expect = 7e-63 Identities = 1127/1755 (64%), Gaps = 57/1755 (3%) Strand=Plus/Minus Query 111606 GAAACCCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGAT 111665 |||| ||||| || | | ||| | || || ||||||| ||||| || |||||| | Sbjct 1116621 GAAAGACCACAACACCTTCTTATGAGAGTGGCCGTCGGTATTCATGGTGATGATATTCCT 1116562 Query 111666 TCTGTTTTGGAGACATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAAC 111724 || ||||| |||| ||| |||||| | | || |||| || ||| ||||||| Sbjct 1116561 AAGGTGTTGGAATCATATGACTTGATGTCAAAGAGATAC-TTCACACATGCATCACCAAC 1116503 Query 111725 CCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAA 111784 | ||||| |||||||| ||| | || || ||||| || ||| | |||||| || Sbjct 1116502 GTTGTTCAATGCTGGTACTCCACGCCCTCAGATGTCATCATGCTTCTTAGTTGCAATGAA 1116443 Query 111785 GGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTG 111844 || || || || | || || |||| ||| | | | ||||| || || ||| Sbjct 1116442 AGATGACTCTATTGAAGGTATCTACGATACTTTGAAACAGTGTGCTTTGATTTCTAAGAC 1116383 Query 111845 GGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCG--TATTAGA 111902 ||||||||||| || | ||||| || | | | || || || ||| |||| Sbjct 1116382 TGCTGGTGGTATTGGTCTTCACATTCACAACATTCGTTCC-ACTGGT-TCGTATATTGCC 1116325 Query 111903 GGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 111962 ||||| |||||| ||| | ||||| ||||| ||| |||| || || ||| || || Sbjct 1116324 GGTACTAATGGTACATCCAACGGTATAATTCCGATGGTTCGTGTGTTCAACAGTACTGCT 1116265 Query 111963 CGCTATGTAAACCAAGCTGGGCGTCGCAAG------GGATCTATCGCAGTCTATCTTGAG 112016 | ||||| | |||| || || |||| || | || || | || | ||| Sbjct 1116264 AGATATGTGGATCAAGGTG---GTAACAAGAGACCAGGTGCCATTGCTATTTACTTGGAG 1116208 Query 112017 CCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAG 112076 || ||||| || |||||| | || || | || | | || || ||| | |||||| Sbjct 1116207 CCTTGGCATGCTGATATCTTCGACTTTATCGATATCAGAAAGAATCATGGTAAAGAGGAG 1116148 Query 112077 GCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGT 112135 | |||| || ||| | || | ||||| |||||||||||| | || |||||| | || Sbjct 1116147 ATTC-GTGCACGTGATTTGTTTCCAGCTCTTTGGATTCCAGATTTATTTATGAAGCGTGT 1116089 Query 112136 TGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGC 112195 ||| | | ||| ||| | | || | ||| ||||||| |||||||| |||| Sbjct 1116088 GGAGAGCAACGACAAGTGGACATTGTTCTCTCCTTCTGAGGCACCAGGTCTCTCAGATGT 1116029 Query 112196 CGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGC 112255 ||||| ||||| || | ||||| |||||| ||||| | || | | Sbjct 1116028 TTACGGTGACGAGTTCGAGAAATTGTACACTCGTTACGAGAAAGAAGGACGTGGAAGAAG 1115969 Query 112256 GACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTA 112314 || ||| ||| | || | | ||| | ||| | || |||| || || ||||||| Sbjct 1115968 AACAGTGAAGGCT-CAGAAGTTATGGTACCAGATTTTGGAGGCTCAGACAGAAACTGGTA 1115910 Query 112315 CACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTG 112374 |||| | ||| | ||||| || || ||||| |||||||||||| ||||| |||||| Sbjct 1115909 CACCTTTCATGATCTACAAGGATGCTTGTAATAGAAAGAGTAATCAGAAGAACTTGGGTA 1115850 Query 112375 TGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGG 112434 ||||| ||| ||| | || || | | || | | ||||||| | Sbjct 1115849 CCATCAAATCTTCGAACTTGTGCTGTGAGGTTGTCGAGTACTCCTCTCCAGATGAGGTTG 1115790 Query 112435 CTGTGTGTAACCTCG-CATCAATCGCTCTCCCCAAGTATGTGGATCCAGA-GACAAAGAC 112492 |||||||||| | | || || | | | | || | ||| || |||| || | | Sbjct 1115789 GTGTGTGTAACTTGGCCAACATTTG-TTTGCCTGCCTTTGTTGAGTCAGATGAGGA--TC 1115733 Query 112493 ATT--TG-----ATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAA 112545 ||| || | | || || | ||| | |||| ||| ||| || ||| ||| Sbjct 1115732 ATTGCTGGTTCAACTTCGAGAAGTTGCACAAGATTACTAAAGTTGTTACCCGTAACTTAA 1115673 Query 112546 ACAGAGTTATTGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGA 112602 || | |||||||| ||||||| || || || |||| || ||||| || || |||| Sbjct 1115672 ACCGTGTTATTGACAGAAATTACTATCCAGTTCCTGAG---GCCCGTAACTCCAACATGA 1115616 Query 112603 GACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGAT---GTATTCATTCTTTGTC 112659 || || | || |||| ||| ||| |||| ||||| || ||| | ||||| ||| | | Sbjct 1115615 GAAACAGACCTATTGCTCTTGGTATCCAGGGTCTTGCTGATACCTTCTTCATGCTTAGAC 1115556 Query 112660 GCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGT 112719 | | ||||| | || || ||| | || | ||||||||||| ||| Sbjct 1115555 TAC---CTTTTGACTGTCCAGATGCACGGGAGCTTAACATTCAGATATTTGAGACCTTGT 1115499 Query 112720 ATCACGCCGCTCTTGAGGCGAGTTC--GGAGTTGGCAGAGGTTGATGGTCCATATGAAAC 112777 ||||||| || | ||| || | | || | || | || || ||| | ||| | || Sbjct 1115498 ATCACGCTGCATTGGAG--GAATCCAACCAGCTTGCTGTGGAAGAGGGTACTTATCAGAC 1115441 Query 112778 CTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGAC 112837 | ||| || |||||||||||| | || | || |||| |||||||||| | || | Sbjct 1115440 ATATGAAGGCTCTCCAGCTTCAAAGGGTATTCTACAATATGATATGTGGAACAAAAAGCC 1115381 Query 112838 CAAGCTTCACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAA 112897 | | || | |||||||| |||| |||| || ||| |||||| | || Sbjct 1115380 TACGGATCTGTGGGACTGGGATACTCTGAAGGCTAAGATTGCCAAGACTGGTCTTAGAAA 1115321 Query 112898 CAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGA 112957 | ||||||| ||||||| ||||| || || || || | || || ||||| |||| || Sbjct 1115320 CTCTCTTTTGGTGGCACCTATGCCGACTGCTTCTACTTCCCAGATTATGGGTTATAACGA 1115261 Query 112958 ATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGT 113017 ||| || ||||| | ||| | |||||||||| ||||||| || || || || || Sbjct 1115260 ATGTTTCGAACCATTCACCTCTAACATCTATCAGAGAAGAGTTCTTGCTGGTGAATTCCA 1115201 Query 113018 GATTGTCAA--CAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGAT 113075 ||| || || | ||| | || || || | || || || | ||| | | | Sbjct 1115200 GATCGTTAATCCTTACATGT--TGAGAGATCTTATTGACATGGGAATATGGAACGATGCA 1115143 Query 113076 ATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGAT 113135 |||||| | |||| | | | ||||| ||||| || | | |||| ||| Sbjct 1115142 ATGAAGAACTTCATCATTCACGACAACGGTTCTATTCAGAACTTGCCAAACGTTCCCGAT 1115083 Query 113136 GAAATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATG 113195 | || |||||||||||| | ||||||||||| || |||| |||||| || ||| Sbjct 1115082 AAGATCAAGAAGTTGTACAGGACAGTTTGGGAGATTTCTCAGAAGTCTGTCATCGATATG 1115023 Query 113196 GCCGCAGATCGTGGTCGC-TTCATTGATCAAAGTCAAAGTATGA--ATCTATTCATGGAA 113252 || || ||| | || ||| | ||| || |||| ||||| ||| ||| || | Sbjct 1115022 GCTGCTGATAG-GGGCGCATACATCTGCCAGTCTCAATCTATGAACATCCATT--TGCAG 1114966 Query 113253 AGTCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAA 113312 ||||| ||| || | |||| |||||| | || | ||||||||||| | ||| Sbjct 1114965 TCACCAACTATGGGTAAATTGACTTCCATGCACTTTTATGGCTGGAAGAAGGGCTTGAAA 1114906 Query 113313 ACGGGGATGTATTAC 113327 || || ||||| ||| Sbjct 1114905 ACAGGTATGTACTAC 1114891 >seq22 Length=1510904 Score = 102 bits (112), Expect = 1e-16 Identities = 533/839 (64%), Gaps = 29/839 (3%) Strand=Plus/Plus Query 112008 TATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGT 112067 ||||||||||| ||||| |||||||| |||| ||||| || | ||||| || Sbjct 295137 TATCTTGAGCCCTGGCATGCGGATATTCTGGAATTCCTCGACCTCAAGAAGAACCACGGC 295196 Query 112068 GATGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATG 112127 | ||||| |||| | |||||||| | || | |||||||| || || |||||| Sbjct 295197 AAGGAGGAAATGCGGGCAAGGGATCTCTTTTATGCGTTGTGGATTCCGGACCTGTTCATG 295256 Query 112128 AAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTC 112187 | | | || || | || | ||| |||||||| | || | ||||| || || Sbjct 295257 AGGCGTGTGAAGAACGATGAGATGTGGAGTCTCTTTTCTGAGGATACAGCACCAGGACTA 295316 Query 112188 TCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGG 112247 || || |||| ||||||||| |||| |||||| ||||||| ||| ||| | | Sbjct 295317 TCAGACAAATGGGGTCCCGAGTTTGAATCCCTGTACACACAGTACGAAAAAG-AAGGCCG 295375 Query 112248 GCGACTGCGAC-GGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGA 112306 | || || | | || || | | |||||| | ||||| | ||||| ||||| Sbjct 295376 GTATCTACGGCAGTTGAAGGCCCGCAAGGTGTGGGAGAGGATTCTTTATTCTCAGACCGA 295435 Query 112307 GACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAA 112366 ||| || || || | | ||||| || || | || || ||| ||||| ||||| Sbjct 295436 GACAGGAACGCCTTTCCTCCTTTATAAGGATTCGTGCAATGCGAAGTCGAATCAGAAGAA 295495 Query 112367 TTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGA 112426 | || |||||| ||||| ||||| ||| | | || | || ||| || Sbjct 295496 CCTTGGAACCATCAAGTCGTCCAATCTCTGCTGCGAAGTTGTCGAGTACTCATCCAAGGA 295555 Query 112427 TGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGAC 112486 |||| || ||||| ||||| | || | | | || | || |||||| || || Sbjct 295556 CGAGATCGCCGTGTGCAACCTTGGCTCTGTTGGGTTGCCGATGTTTGTGGA-GGAG-GAA 295613 Query 112487 AAAGAC----ATTTGATTAT-------GAAAAACTCCACGAAGTTACGAAAACTGTCACA 112535 || ||| | || | | || || |||||| | || |||| | || Sbjct 295614 AACGACGGTACTAGGAGTTTCAACCTGGAGAAGCTCCACCAGGTGGTGAAAGTTCTCGTG 295673 Query 112536 AAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAG-ACTGCTCGTAAATC 112594 || ||||| ||| | ||||| ||| | ||||| ||||| | ||| | | || Sbjct 295674 AAGAACCTCAACCGGGTTATCGATGTGGGTGCATACCCGCTTGAGCAGTGC-AGAACGTC 295732 Query 112595 TAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATG---TATTCAT 112651 |||| ||| || ||||| |||| ||||||| ||||| | || |||| | |||| Sbjct 295733 AAATACGAGGCATCGTCCGATTGCAGTCGGTGTTCAAGGATTAGCAGATGCTTTCTTCAG 295792 Query 112652 TCTTTGTCGCCACGCATTTG--ATTCCG-ACGAAGCGAAGGAAATCAATGCGCGTATATT 112708 || | | | |||||| | |||| || |||| | ||| || || || Sbjct 295793 GCTGAGGTGTC---CATTTGGAAGTCCGTACTCCCGGAAGTTGAACAA---GCAAATCTT 295846 Query 112709 TGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCC 112768 | |||| || || || || || |||||| | | ||||||||| || || || || Sbjct 295847 TCAGACGATCTACCATGCAGCCCTTGAGCAGTCTGTGGAGTTGGCTCAGAAAGACGGCCC 295906 Query 112769 ATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGG 112827 |||| || ||||| || || |||| || ||||| || ||||| | ||||||||||| Sbjct 295907 ATATTCGACGTTTGAAGGCTCGCCAGGCTCGCAAGGTGTTCTTCAGTATGATATGTGGG 295965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620742182740160